RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 CIITAP33076 1130 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 PRKCIP41743 596 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 POLR2FP61218 127 aaKnown RBP9.22□□□□□ -0.93
CSTF3-208ENST00000528865 ATP2B2Q01814 1243 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 APBA1Q02410 837 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 SPIRE1Q08AE8 756 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 PPFIA1Q13136 1202 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 ADAM9Q13443 819 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 GIT2Q14161 759 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 BMT2Q1RMZ1 405 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 QRICH1Q2TAL8 776 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 HERC4Q5GLZ8 1057 aaPredicted RBP9.22□□□□□ -0.93
CSTF3-208ENST00000528865 APOBEC3HQ6NTF7 200 aaKnown RBP9.22□□□□□ -0.93
CSTF3-208ENST00000528865 GBP6Q6ZN66 633 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 IRF2BP2Q7Z5L9 587 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 GPBP1Q86WP2 473 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 IFT20Q8IY31 132 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 IQCKQ8N0W5 287 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 SYT2Q8N9I0 419 aaPredicted RBP9.22□□□□□ -0.93
CSTF3-208ENST00000528865 FAM76AQ8TAV0 307 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.22□□□□□ -0.93
CSTF3-208ENST00000528865 TBC1D5Q92609 795 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 C8orf37Q96NL8 207 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 FGFBP2Q9BYJ0 223 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 ANO3Q9BYT9 981 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 TANGO6Q9C0B7 1094 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 NLRC4Q9NPP4 1024 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 RNF216Q9NWF9 866 aaPredicted RBP9.22□□□□□ -0.93
CSTF3-208ENST00000528865 TMEM59LQ9UK28 342 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 RRP15Q9Y3B9 282 aaKnown RBP9.22□□□□□ -0.93
CSTF3-208ENST00000528865 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.22□□□□□ -0.93
CSTF3-208ENST00000528865 LRRC37AA6NMS7 1700 aa9.22□□□□□ -0.93
CSTF3-208ENST00000528865 ATAD5Q96QE3 1844 aa9.21□□□□□ -0.93
CSTF3-208ENST00000528865 POLRMTO00411 1230 aaKnown RBP9.21□□□□□ -0.94
CSTF3-208ENST00000528865 PDXKO00764 312 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 MEIS2O14770 477 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 MED24O75448 989 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 PALMO75781 387 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 FOSP01100 380 aaPredicted RBP9.21□□□□□ -0.94
CSTF3-208ENST00000528865 HLA-DOAP06340 250 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 CYP3A4P08684 503 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 SPATA31C1P0DKV0 1188 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 ZBTB48P10074 688 aaPredicted RBP9.21□□□□□ -0.94
CSTF3-208ENST00000528865 KLRC1P26715 233 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 RPA1P27694 616 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 HOXD13P35453 343 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 IRAK1P51617 712 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 FKBP1AP62942 108 aaKnown RBP9.21□□□□□ -0.94
CSTF3-208ENST00000528865 DDR1Q08345 913 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 KCNH2Q12809 1159 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 PICALMQ13492 652 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 ASIC2Q16515 512 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 CDC37Q16543 378 aaPredicted RBP9.21□□□□□ -0.94
CSTF3-208ENST00000528865 NFIL3Q16649 462 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 CCDC181Q5TID7 509 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 FOXR1Q6PIV2 292 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 CATSPER3Q86XQ3 398 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 CLEC10AQ8IUN9 316 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 SIAH1Q8IUQ4 282 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 GSPT2Q8IYD1 628 aaKnown RBP9.21□□□□□ -0.94
CSTF3-208ENST00000528865 ANKRD13CQ8N6S4 541 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 TSEN2Q8NCE0 465 aaKnown RBP9.21□□□□□ -0.94
CSTF3-208ENST00000528865 ERMNQ8TAM6 284 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 ETNPPLQ8TBG4 499 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 SCFD2Q8WU76 684 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 RIN2Q8WYP3 895 aaPredicted RBP9.21□□□□□ -0.94
CSTF3-208ENST00000528865 PBKQ96KB5 322 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 FAM20AQ96MK3 541 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 INPP4AQ96PE3 977 aaPredicted RBP9.21□□□□□ -0.94
CSTF3-208ENST00000528865 KANSL2Q9H9L4 492 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 RBM12Q9NTZ6 932 aaKnown RBP9.21□□□□□ -0.94
CSTF3-208ENST00000528865 LCMT1Q9UIC8 334 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 USP21Q9UK80 565 aa9.21□□□□□ -0.94
CSTF3-208ENST00000528865 A0A087X0T9 212 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 NPHP3-ACAD11A0A0J9YXS1 232 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 POTEB3A0JP26 581 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 GTPBP10A4D1E9 387 aaKnown RBP9.2□□□□□ -0.94
CSTF3-208ENST00000528865 GOLGA6CA6NDK9 693 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 POTECB2RU33 542 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 PPEF1O14829 653 aaPredicted RBP9.2□□□□□ -0.94
CSTF3-208ENST00000528865 SLC16A3O15427 465 aaKnown RBP9.2□□□□□ -0.94
CSTF3-208ENST00000528865 BUB1O43683 1085 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 CALUO43852 315 aaPredicted RBP9.2□□□□□ -0.94
CSTF3-208ENST00000528865 GFPT2O94808 682 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 FAM228BP0C875 321 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 GOLGA6DP0CG33 693 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 SLC16A2P36021 539 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 EIF6P56537 245 aaKnown RBP9.2□□□□□ -0.94
CSTF3-208ENST00000528865 CORO7P57737 925 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 HDLBPQ00341 1268 aaKnown RBP9.2□□□□□ -0.94
CSTF3-208ENST00000528865 KLHL30Q0D2K2 578 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 EPHA7Q15375 998 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 KNOP1Q1ED39 458 aaKnown RBP9.2□□□□□ -0.94
CSTF3-208ENST00000528865 TDRD12Q587J7 1177 aaKnown RBP9.2□□□□□ -0.94
CSTF3-208ENST00000528865 SLC27A3Q5K4L6 730 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 SLFN13Q68D06 897 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 C8orf74Q6P047 294 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 TATDN1Q6P1N9 297 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 POTEBQ6S5H4 581 aa9.2□□□□□ -0.94
CSTF3-208ENST00000528865 BTNL9Q6UXG8 535 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms