RNA–Protein interactions for RNA: ENST00000528851.5

MS4A6A-208, Transcript of membrane spanning 4-domains A6A, human

TSL 1 (best) BASIC

Gene MS4A6A, Length 1,806 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MS4A6A-208	ENST00000528851	ANKRD33	Q7Z3H0	272 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	CYP2W1	Q8TAV3	490 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	SEPT1	Q8WYJ6	367 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	MBOAT7	Q96N66	472 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	SDF4	Q9BRK5	362 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	KATNAL1	Q9BW62	490 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	AGO4	Q9HCK5	861 aa	Known RBP	8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	GJB4	Q9NTQ9	266 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	LCT	P09848	1927 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	DCDC2C	A8MYV0	355 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	BTBD18	B2RXH4	712 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	TK2	O00142	265 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	NOP56	O00567	594 aa	Known RBP	8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	TLR3	O15455	904 aa	Known RBP	8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	ATG7	O95352	703 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	PTGS1	P23219	599 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	RTP1	P59025	263 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	NEK8	Q86SG6	692 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	DIS3L2	Q8IYB7	885 aa	Known RBP	8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	OXER1	Q8TDS5	423 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	KHSRP	Q92945	711 aa	Known RBP eCLIP	8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	TNFRSF25	Q93038	417 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	INTS4	Q96HW7	963 aa	Known RBP	8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	GPR20	Q99678	358 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	ZNF577	Q9BSK1	485 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	FOXP1	Q9H334	677 aa	Predicted RBP	8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	BCAS3	Q9H6U6	928 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	SMC3	Q9UQE7	1217 aa		8.8	□□□□□ -1
MS4A6A-208	ENST00000528851	GSTTP1	A0A1W2PQM5	241 aa		8.79	□□□□□ -1
MS4A6A-208	ENST00000528851	HAS3	O00219	553 aa		8.79	□□□□□ -1
MS4A6A-208	ENST00000528851	DHX15	O43143	795 aa	Known RBP	8.79	□□□□□ -1
MS4A6A-208	ENST00000528851	DTNB	O60941	627 aa		8.79	□□□□□ -1
MS4A6A-208	ENST00000528851	SUPT20HL2	P0C7V6	817 aa		8.79	□□□□□ -1
MS4A6A-208	ENST00000528851	TLE2	Q04725	743 aa		8.79	□□□□□ -1
MS4A6A-208	ENST00000528851	INF2	Q27J81	1249 aa		8.79	□□□□□ -1
MS4A6A-208	ENST00000528851	PRR16	Q569H4	304 aa		8.79	□□□□□ -1
MS4A6A-208	ENST00000528851	NFRKB	Q6P4R8	1299 aa		8.79	□□□□□ -1
MS4A6A-208	ENST00000528851	ADGRD1	Q6QNK2	874 aa		8.79	□□□□□ -1
MS4A6A-208	ENST00000528851	PIK3AP1	Q6ZUJ8	805 aa		8.79	□□□□□ -1
MS4A6A-208	ENST00000528851	SESTD1	Q86VW0	696 aa		8.79	□□□□□ -1
MS4A6A-208	ENST00000528851	TNPO1	Q92973	898 aa	Known RBP	8.79	□□□□□ -1
MS4A6A-208	ENST00000528851	RIT2	Q99578	217 aa		8.79	□□□□□ -1
MS4A6A-208	ENST00000528851	C16orf70	Q9BSU1	422 aa		8.79	□□□□□ -1
MS4A6A-208	ENST00000528851	SLC9A2	Q9UBY0	812 aa		8.79	□□□□□ -1
MS4A6A-208	ENST00000528851	ATP11B	Q9Y2G3	1177 aa		8.79	□□□□□ -1
MS4A6A-208	ENST00000528851	GRIN2D	O15399	1336 aa		8.79	□□□□□ -1
MS4A6A-208	ENST00000528851		H3BRB1	525 aa		8.78	□□□□□ -1
MS4A6A-208	ENST00000528851		K7ELQ4	463 aa	Predicted RBP	8.78	□□□□□ -1
MS4A6A-208	ENST00000528851	IPO5	O00410	1097 aa	Known RBP	8.78	□□□□□ -1
MS4A6A-208	ENST00000528851	TBX3	O15119	743 aa		8.78	□□□□□ -1
MS4A6A-208	ENST00000528851	SLC34A2	O95436	690 aa		8.78	□□□□□ -1
MS4A6A-208	ENST00000528851	GJB2	P29033	226 aa		8.78	□□□□□ -1
MS4A6A-208	ENST00000528851	NR5A1	Q13285	461 aa		8.78	□□□□□ -1
MS4A6A-208	ENST00000528851	NBPF20	Q3BBV1	942 aa		8.78	□□□□□ -1
MS4A6A-208	ENST00000528851	TRIM60	Q495X7	471 aa		8.78	□□□□□ -1
MS4A6A-208	ENST00000528851	KAT2B	Q92831	832 aa		8.78	□□□□□ -1
MS4A6A-208	ENST00000528851	LENG9	Q96B70	501 aa		8.78	□□□□□ -1
MS4A6A-208	ENST00000528851	FAM20A	Q96MK3	541 aa		8.78	□□□□□ -1
MS4A6A-208	ENST00000528851	TUT1	Q9H6E5	874 aa	Known RBP	8.78	□□□□□ -1
MS4A6A-208	ENST00000528851	JPH1	Q9HDC5	661 aa	Predicted RBP	8.78	□□□□□ -1
MS4A6A-208	ENST00000528851	PRKAG2	Q9UGJ0	569 aa		8.78	□□□□□ -1
MS4A6A-208	ENST00000528851	ARHGAP33	O14559	1287 aa		8.77	□□□□□ -1
MS4A6A-208	ENST00000528851	MSH4	O15457	936 aa		8.77	□□□□□ -1
MS4A6A-208	ENST00000528851	LGR5	O75473	907 aa		8.77	□□□□□ -1
MS4A6A-208	ENST00000528851	F2	P00734	622 aa		8.77	□□□□□ -1
MS4A6A-208	ENST00000528851	CD4	P01730	458 aa		8.77	□□□□□ -1
MS4A6A-208	ENST00000528851	PDIA4	P13667	645 aa	Known RBP	8.77	□□□□□ -1
MS4A6A-208	ENST00000528851	PDC	P20941	246 aa		8.77	□□□□□ -1
MS4A6A-208	ENST00000528851	U2AF2	P26368	475 aa	Known RBP eCLIP	8.77	□□□□□ -1
MS4A6A-208	ENST00000528851	TCF7	P36402	384 aa	Predicted RBP	8.77	□□□□□ -1
MS4A6A-208	ENST00000528851	PSEN2	P49810	448 aa		8.77	□□□□□ -1
MS4A6A-208	ENST00000528851	PSMC6	P62333	389 aa		8.77	□□□□□ -1
MS4A6A-208	ENST00000528851	KRT76	Q01546	638 aa		8.77	□□□□□ -1
MS4A6A-208	ENST00000528851	FAAP100	Q0VG06	881 aa		8.77	□□□□□ -1
MS4A6A-208	ENST00000528851	ITGB3BP	Q13352	177 aa	Predicted RBP	8.77	□□□□□ -1
MS4A6A-208	ENST00000528851	ORC2	Q13416	577 aa	Predicted RBP	8.77	□□□□□ -1
MS4A6A-208	ENST00000528851	LETM2	Q2VYF4	491 aa		8.77	□□□□□ -1
MS4A6A-208	ENST00000528851	LARP1B	Q659C4	914 aa	Known RBP	8.77	□□□□□ -1
MS4A6A-208	ENST00000528851	ZNF746	Q6NUN9	644 aa	Predicted RBP	8.77	□□□□□ -1
MS4A6A-208	ENST00000528851	PLPPR4	Q7Z2D5	763 aa		8.77	□□□□□ -1
MS4A6A-208	ENST00000528851	SLC5A5	Q92911	643 aa		8.77	□□□□□ -1
MS4A6A-208	ENST00000528851	SMARCAD1	Q9H4L7	1026 aa		8.77	□□□□□ -1
MS4A6A-208	ENST00000528851	DDX25	Q9UHL0	483 aa	Known RBP	8.77	□□□□□ -1
MS4A6A-208	ENST00000528851	TCEAL9	Q9UHQ7	104 aa		8.77	□□□□□ -1
MS4A6A-208	ENST00000528851	LRRC37A2	A6NM11	1700 aa		8.77	□□□□□ -1.01
MS4A6A-208	ENST00000528851	IGKV6D-21	A0A0A0MT36	114 aa		8.77	□□□□□ -1.01
MS4A6A-208	ENST00000528851	SORBS3	O60504	671 aa		8.77	□□□□□ -1.01
MS4A6A-208	ENST00000528851	CCNT1	O60563	726 aa	Known RBP	8.77	□□□□□ -1.01
MS4A6A-208	ENST00000528851	BAG4	O95429	457 aa	Known RBP	8.77	□□□□□ -1.01
MS4A6A-208	ENST00000528851	LGALS2	P05162	132 aa		8.77	□□□□□ -1.01
MS4A6A-208	ENST00000528851	CLTB	P09497	229 aa		8.77	□□□□□ -1.01
MS4A6A-208	ENST00000528851	SLC26A2	P50443	739 aa		8.77	□□□□□ -1.01
MS4A6A-208	ENST00000528851	GUCY1B3	Q02153	619 aa		8.77	□□□□□ -1.01
MS4A6A-208	ENST00000528851	GNL2	Q13823	731 aa	Known RBP	8.77	□□□□□ -1.01
MS4A6A-208	ENST00000528851	MFSD10	Q14728	455 aa		8.77	□□□□□ -1.01
MS4A6A-208	ENST00000528851	KIAA0753	Q2KHM9	967 aa		8.77	□□□□□ -1.01
MS4A6A-208	ENST00000528851	EARS2	Q5JPH6	523 aa	Known RBP	8.77	□□□□□ -1.01
MS4A6A-208	ENST00000528851	ABHD15	Q6UXT9	468 aa		8.77	□□□□□ -1.01
MS4A6A-208	ENST00000528851	FAM126B	Q8IXS8	530 aa		8.77	□□□□□ -1.01
MS4A6A-208	ENST00000528851	SMAP1	Q8IYB5	467 aa	Predicted RBP	8.77	□□□□□ -1.01

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms