RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 GSTTP1A0A1W2PQM5 241 aa16.26■□□□□ 0.19
CAPN1-216ENST00000528739 ADAMTS3O15072 1205 aa16.26■□□□□ 0.19
CAPN1-216ENST00000528739 TREHO43280 583 aa16.26■□□□□ 0.19
CAPN1-216ENST00000528739 CKBP12277 381 aa16.26■□□□□ 0.19
CAPN1-216ENST00000528739 XBP1P17861 261 aa16.26■□□□□ 0.19
CAPN1-216ENST00000528739 FAM109BQ6ICB4 259 aaPredicted RBP16.26■□□□□ 0.19
CAPN1-216ENST00000528739 SMARCAD1Q9H4L7 1026 aa16.26■□□□□ 0.19
CAPN1-216ENST00000528739 AGO4Q9HCK5 861 aaKnown RBP16.26■□□□□ 0.19
CAPN1-216ENST00000528739 SH3GLB2Q9NR46 395 aa16.26■□□□□ 0.19
CAPN1-216ENST00000528739 ERAP1Q9NZ08 941 aa16.26■□□□□ 0.19
CAPN1-216ENST00000528739 CXXC1Q9P0U4 656 aaPredicted RBP16.26■□□□□ 0.19
CAPN1-216ENST00000528739 MSRAQ9UJ68 235 aa16.26■□□□□ 0.19
CAPN1-216ENST00000528739 SCN10AQ9Y5Y9 1956 aa16.26■□□□□ 0.19
CAPN1-216ENST00000528739 MEIS1O00470 390 aa16.25■□□□□ 0.19
CAPN1-216ENST00000528739 BACH1O14867 736 aa16.25■□□□□ 0.19
CAPN1-216ENST00000528739 DTNBO60941 627 aa16.25■□□□□ 0.19
CAPN1-216ENST00000528739 DNAJB2P25686 324 aa16.25■□□□□ 0.19
CAPN1-216ENST00000528739 IGBP1P78318 339 aa16.25■□□□□ 0.19
CAPN1-216ENST00000528739 PRR16Q569H4 304 aa16.25■□□□□ 0.19
CAPN1-216ENST00000528739 DHX38Q92620 1227 aaKnown RBP16.25■□□□□ 0.19
CAPN1-216ENST00000528739 TIFAQ96CG3 184 aa16.25■□□□□ 0.19
CAPN1-216ENST00000528739 ZNF577Q9BSK1 485 aa16.25■□□□□ 0.19
CAPN1-216ENST00000528739 MTMR10Q9NXD2 777 aa16.25■□□□□ 0.19
CAPN1-216ENST00000528739 PCDHA4Q9UN74 947 aa16.25■□□□□ 0.19
CAPN1-216ENST00000528739 FAM86B1E9PN63 330 aa16.24■□□□□ 0.19
CAPN1-216ENST00000528739 PFKFB2O60825 505 aa16.24■□□□□ 0.19
CAPN1-216ENST00000528739 FAM86B2P0C5J1 330 aa16.24■□□□□ 0.19
CAPN1-216ENST00000528739 PBX2P40425 430 aa16.24■□□□□ 0.19
CAPN1-216ENST00000528739 ACTR2P61160 394 aa16.24■□□□□ 0.19
CAPN1-216ENST00000528739 PPFIA1Q13136 1202 aa16.24■□□□□ 0.19
CAPN1-216ENST00000528739 HIC1Q14526 733 aa16.24■□□□□ 0.19
CAPN1-216ENST00000528739 ZNF618Q5T7W0 954 aa16.24■□□□□ 0.19
CAPN1-216ENST00000528739 BLIDQ8IZY5 108 aa16.24■□□□□ 0.19
CAPN1-216ENST00000528739 NECAB1Q8N987 351 aa16.24■□□□□ 0.19
CAPN1-216ENST00000528739 TNPO1Q92973 898 aaKnown RBP16.24■□□□□ 0.19
CAPN1-216ENST00000528739 AIFM3Q96NN9 605 aa16.24■□□□□ 0.19
CAPN1-216ENST00000528739 CTAGE1Q96RT6 745 aa16.24■□□□□ 0.19
CAPN1-216ENST00000528739 SEMA6BQ9H3T3 888 aa16.24■□□□□ 0.19
CAPN1-216ENST00000528739 TRPC6Q9Y210 931 aa16.24■□□□□ 0.19
CAPN1-216ENST00000528739 NFASCO94856 1347 aa16.23■□□□□ 0.19
CAPN1-216ENST00000528739 RSPH10B2B2RC85 870 aa16.23■□□□□ 0.19
CAPN1-216ENST00000528739 PARNO95453 639 aaKnown RBP16.23■□□□□ 0.19
CAPN1-216ENST00000528739 CYP3A4P08684 503 aa16.23■□□□□ 0.19
CAPN1-216ENST00000528739 CTSHP09668 335 aa16.23■□□□□ 0.19
CAPN1-216ENST00000528739 RSPH10BP0C881 870 aa16.23■□□□□ 0.19
CAPN1-216ENST00000528739 ATP2A2P16615 1042 aaKnown RBP16.23■□□□□ 0.19
CAPN1-216ENST00000528739 KCNJ6P48051 423 aa16.23■□□□□ 0.19
CAPN1-216ENST00000528739 STAT5BP51692 787 aa16.23■□□□□ 0.19
CAPN1-216ENST00000528739 RABGGTBP53611 331 aa16.23■□□□□ 0.19
CAPN1-216ENST00000528739 SETQ01105 290 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-216ENST00000528739 ITGB3BPQ13352 177 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-216ENST00000528739 NIPA1Q7RTP0 329 aa16.23■□□□□ 0.19
CAPN1-216ENST00000528739 WNT8BQ93098 351 aa16.23■□□□□ 0.19
CAPN1-216ENST00000528739 PBX4Q9BYU1 374 aa16.23■□□□□ 0.19
CAPN1-216ENST00000528739 C22orf23Q9BZE7 217 aa16.23■□□□□ 0.19
CAPN1-216ENST00000528739 ORC3Q9UBD5 711 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-216ENST00000528739 KCNJ14Q9UNX9 436 aa16.23■□□□□ 0.19
CAPN1-216ENST00000528739 SAMM50Q9Y512 469 aa16.23■□□□□ 0.19
CAPN1-216ENST00000528739 NRCAMQ92823 1304 aa16.22■□□□□ 0.19
CAPN1-216ENST00000528739 IPO5O00410 1097 aaKnown RBP16.22■□□□□ 0.19
CAPN1-216ENST00000528739 RAB30Q15771 203 aa16.22■□□□□ 0.19
CAPN1-216ENST00000528739 GRIK4Q16099 956 aa16.22■□□□□ 0.19
CAPN1-216ENST00000528739 RASIP1Q5U651 963 aa16.22■□□□□ 0.19
CAPN1-216ENST00000528739 FAM160B1Q5W0V3 765 aa16.22■□□□□ 0.19
CAPN1-216ENST00000528739 MIS18BP1Q6P0N0 1132 aa16.22■□□□□ 0.19
CAPN1-216ENST00000528739 TRMT1LQ7Z2T5 733 aaKnown RBP16.22■□□□□ 0.19
CAPN1-216ENST00000528739 SERINC5Q86VE9 423 aa16.22■□□□□ 0.19
CAPN1-216ENST00000528739 CKAP2LQ8IYA6 745 aa16.22■□□□□ 0.19
CAPN1-216ENST00000528739 TBCKQ8TEA7 893 aa16.22■□□□□ 0.19
CAPN1-216ENST00000528739 LMBR1Q8WVP7 490 aa16.22■□□□□ 0.19
CAPN1-216ENST00000528739 WASF1Q92558 559 aa16.22■□□□□ 0.19
CAPN1-216ENST00000528739 FOSBP53539 338 aa16.21■□□□□ 0.19
CAPN1-216ENST00000528739 ME3Q16798 604 aa16.21■□□□□ 0.19
CAPN1-216ENST00000528739 GALNT17Q6IS24 598 aa16.21■□□□□ 0.19
CAPN1-216ENST00000528739 RSPH3Q86UC2 560 aa16.21■□□□□ 0.19
CAPN1-216ENST00000528739 ZBED2Q9BTP6 218 aa16.21■□□□□ 0.19
CAPN1-216ENST00000528739 NKX2-4Q9H2Z4 354 aa16.21■□□□□ 0.19
CAPN1-216ENST00000528739 ZNF576Q9H609 170 aa16.21■□□□□ 0.19
CAPN1-216ENST00000528739 SLC28A3Q9HAS3 691 aa16.21■□□□□ 0.19
CAPN1-216ENST00000528739 TBC1D22BQ9NU19 505 aa16.21■□□□□ 0.19
CAPN1-216ENST00000528739 IGLV3-22A0A075B6J6 115 aa16.2■□□□□ 0.18
CAPN1-216ENST00000528739 CCDC194A0A1B0GVG4 234 aa16.2■□□□□ 0.18
CAPN1-216ENST00000528739 KIF28PB7ZC32 967 aa16.2■□□□□ 0.18
CAPN1-216ENST00000528739 NBNO60934 754 aa16.2■□□□□ 0.18
CAPN1-216ENST00000528739 USP11P51784 963 aa16.2■□□□□ 0.18
CAPN1-216ENST00000528739 RBL2Q08999 1139 aa16.2■□□□□ 0.18
CAPN1-216ENST00000528739 IKBKEQ14164 716 aa16.2■□□□□ 0.18
CAPN1-216ENST00000528739 NONOQ15233 471 aaKnown RBP eCLIP16.2■□□□□ 0.18
CAPN1-216ENST00000528739 TRIM71Q2Q1W2 868 aaKnown RBP16.2■□□□□ 0.18
CAPN1-216ENST00000528739 SWSAP1Q6NVH7 229 aa16.2■□□□□ 0.18
CAPN1-216ENST00000528739 PDXDC2PQ6P474 469 aa16.2■□□□□ 0.18
CAPN1-216ENST00000528739 CNKSR3Q6P9H4 555 aa16.2■□□□□ 0.18
CAPN1-216ENST00000528739 MYLIPQ8WY64 445 aa16.2■□□□□ 0.18
CAPN1-216ENST00000528739 PCYT2Q99447 389 aa16.2■□□□□ 0.18
CAPN1-216ENST00000528739 CDX2Q99626 313 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-216ENST00000528739 TTYH1Q9H313 450 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-216ENST00000528739 ZNF302Q9NR11 478 aa16.2■□□□□ 0.18
CAPN1-216ENST00000528739 TUBE1Q9UJT0 475 aa16.2■□□□□ 0.18
CAPN1-216ENST00000528739 EMSYQ7Z589 1322 aa16.19■□□□□ 0.18
CAPN1-216ENST00000528739 TMEM265A0A087WTH1 108 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms