RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 CSPP1Q1MSJ5 1256 aa13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 TPRNQ4KMQ1 711 aa13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 ADALQ6DHV7 355 aa13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 NCAPH2Q6IBW4 605 aa13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 SHC4Q6S5L8 630 aa13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 METTL7BQ6UX53 244 aa13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 DHX37Q8IY37 1157 aaKnown RBP13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 ZNF579Q8NAF0 562 aaKnown RBP13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 MLXIPQ9HAP2 919 aa13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 LRWD1Q9UFC0 647 aa13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 NKRFO15226 690 aaKnown RBP eCLIP13.68□□□□□ -0.22
TRAF3IP2-211ENST00000528599 GH1P01241 217 aa13.68□□□□□ -0.22
TRAF3IP2-211ENST00000528599 CCL5P13501 91 aa13.68□□□□□ -0.22
TRAF3IP2-211ENST00000528599 ACTR2P61160 394 aa13.68□□□□□ -0.22
TRAF3IP2-211ENST00000528599 KRT76Q01546 638 aa13.68□□□□□ -0.22
TRAF3IP2-211ENST00000528599 HSDL1Q3SXM5 330 aa13.68□□□□□ -0.22
TRAF3IP2-211ENST00000528599 ZNF746Q6NUN9 644 aaPredicted RBP13.68□□□□□ -0.22
TRAF3IP2-211ENST00000528599 EPSTI1Q96J88 318 aa13.68□□□□□ -0.22
TRAF3IP2-211ENST00000528599 LMBRD1Q9NUN5 540 aa13.68□□□□□ -0.22
TRAF3IP2-211ENST00000528599 GSTTP1A0A1W2PQM5 241 aa13.67□□□□□ -0.22
TRAF3IP2-211ENST00000528599 DYNC1LI2O43237 492 aaPredicted RBP13.67□□□□□ -0.22
TRAF3IP2-211ENST00000528599 LAMC2Q13753 1193 aa13.67□□□□□ -0.22
TRAF3IP2-211ENST00000528599 MIER3Q7Z3K6 550 aa13.67□□□□□ -0.22
TRAF3IP2-211ENST00000528599 SYMPKQ92797 1274 aaKnown RBP13.67□□□□□ -0.22
TRAF3IP2-211ENST00000528599 EMID1Q96A84 441 aaPredicted RBP13.67□□□□□ -0.22
TRAF3IP2-211ENST00000528599 AK8Q96MA6 479 aa13.67□□□□□ -0.22
TRAF3IP2-211ENST00000528599 SPATA33Q96N06 139 aa13.67□□□□□ -0.22
TRAF3IP2-211ENST00000528599 MMTAG2Q9BU76 263 aaKnown RBP13.67□□□□□ -0.22
TRAF3IP2-211ENST00000528599 RAB34Q9BZG1 259 aa13.67□□□□□ -0.22
TRAF3IP2-211ENST00000528599 PAK6Q9NQU5 681 aaPredicted RBP13.67□□□□□ -0.22
TRAF3IP2-211ENST00000528599 DISC1Q9NRI5 854 aa13.67□□□□□ -0.22
TRAF3IP2-211ENST00000528599 A0A1W2PQ27 194 aa13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 A0A1W2PQ64 194 aa13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 A0A1W2PQD8 194 aa13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 DUSP11O75319 330 aaKnown RBP13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 ATG7O95352 703 aa13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 IRX5P78411 483 aaPredicted RBP13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 RESP18Q5W5W9 173 aa13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 ABHD15Q6UXT9 468 aa13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 TLK2Q86UE8 772 aa13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 OR6J1Q8NGC5 347 aa13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 AFG1LQ8WV93 481 aa13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 GPR20Q99678 358 aa13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 RNF208Q9H0X6 261 aa13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 FRMPD3Q5JV73 1810 aa13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 WDR64B1ANS9 1081 aa13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 EN2P19622 333 aaPredicted RBP13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 PTMSP20962 102 aa13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 CMA1P23946 247 aa13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 SFNP31947 248 aa13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 JAK3P52333 1124 aa13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 EPHA7Q15375 998 aa13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 SMAP1Q8IYB5 467 aaPredicted RBP13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 HSD17B14Q9BPX1 270 aa13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 EIF2AK1Q9BQI3 630 aaKnown RBP13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 GOLPH3LQ9H4A5 285 aa13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 HMX1Q9NP08 348 aaPredicted RBP13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 RGL1Q9NZL6 768 aa13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 DDX20Q9UHI6 824 aaKnown RBP13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 TCEAL9Q9UHQ7 104 aa13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 Q9Y3F1 56 aa13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 SAMM50Q9Y512 469 aa13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 PCDHA10Q9Y5I2 948 aa13.66□□□□□ -0.22
TRAF3IP2-211ENST00000528599 A0A1B0GVL5 298 aa13.65□□□□□ -0.22
TRAF3IP2-211ENST00000528599 GOLGA6L4A6NEF3 574 aa13.65□□□□□ -0.22
TRAF3IP2-211ENST00000528599 DDX11L8A8MPP1 907 aa13.65□□□□□ -0.22
TRAF3IP2-211ENST00000528599 GOLGA6L22H0YM25 854 aa13.65□□□□□ -0.22
TRAF3IP2-211ENST00000528599 NOP56O00567 594 aaKnown RBP13.65□□□□□ -0.22
TRAF3IP2-211ENST00000528599 CTAGE5O15320 804 aa13.65□□□□□ -0.22
TRAF3IP2-211ENST00000528599 MED24O75448 989 aa13.65□□□□□ -0.22
TRAF3IP2-211ENST00000528599 SUPT20HL2P0C7V6 817 aa13.65□□□□□ -0.22
TRAF3IP2-211ENST00000528599 SPATA31C1P0DKV0 1188 aa13.65□□□□□ -0.22
TRAF3IP2-211ENST00000528599 UBA7P41226 1012 aa13.65□□□□□ -0.22
TRAF3IP2-211ENST00000528599 GSE1Q14687 1217 aa13.65□□□□□ -0.22
TRAF3IP2-211ENST00000528599 CABP7Q86V35 215 aa13.65□□□□□ -0.22
TRAF3IP2-211ENST00000528599 FSIP1Q8NA03 581 aa13.65□□□□□ -0.22
TRAF3IP2-211ENST00000528599 RDM1Q8NG50 284 aa13.65□□□□□ -0.22
TRAF3IP2-211ENST00000528599 PPTC7Q8NI37 304 aa13.65□□□□□ -0.22
TRAF3IP2-211ENST00000528599 SNX29Q8TEQ0 813 aa13.65□□□□□ -0.22
TRAF3IP2-211ENST00000528599 SEPT1Q8WYJ6 367 aa13.65□□□□□ -0.22
TRAF3IP2-211ENST00000528599 DYDC2Q96IM9 177 aa13.65□□□□□ -0.22
TRAF3IP2-211ENST00000528599 CCSER1Q9C0I3 900 aa13.65□□□□□ -0.22
TRAF3IP2-211ENST00000528599 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.65□□□□□ -0.22
TRAF3IP2-211ENST00000528599 A0A087X0B3 334 aa13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 IGKV6D-21A0A0A0MT36 114 aa13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 A6NJR5 290 aa13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 SLITRK3O94933 977 aa13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 PGK1P00558 417 aa13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 RARBP10826 455 aa13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 DEKP35659 375 aaKnown RBP13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 TCF7P36402 384 aaPredicted RBP13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 CCT6AP40227 531 aaKnown RBP13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 GJA9P57773 515 aa13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 UBE2HP62256 183 aa13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 CYP4A11Q02928 519 aa13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 KARSQ15046 597 aaKnown RBP13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 ECM1Q16610 540 aa13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 UGCGQ16739 394 aa13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 KRT79Q5XKE5 535 aa13.64□□□□□ -0.23
TRAF3IP2-211ENST00000528599 LHX8Q68G74 356 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms