RNA–Protein interactions for RNA: ENST00000528246.5

MSRA-210, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 1 (best) BASIC

Gene MSRA, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-210ENST00000528246 SMIM5Q71RC9 77 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 FRMD5Q7Z6J6 570 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 TXNRD3Q86VQ6 643 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 BCAS4Q8TDM0 211 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 HDAC7Q8WUI4 952 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 RIN2Q8WYP3 895 aaPredicted RBP11.29□□□□□ -0.6
MSRA-210ENST00000528246 CEP95Q96GE4 821 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 MTMR4Q9NYA4 1195 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 GTPBP10A4D1E9 387 aaKnown RBP11.29□□□□□ -0.6
MSRA-210ENST00000528246 CCDC188H7C350 402 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 TBX3O15119 743 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 EDIL3O43854 480 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 TLR2O60603 784 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 ZMYND10O75800 440 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 BTDP43251 543 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 RHBDL3P58872 404 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 GNGT1P63211 74 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 GFPT1Q06210 699 aaPredicted RBP11.29□□□□□ -0.6
MSRA-210ENST00000528246 GABPAQ06546 454 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 DRP2Q13474 957 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 PPP2R5EQ16537 467 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 CCDC40Q4G0X9 1142 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 SWT1Q5T5J6 900 aaKnown RBP11.29□□□□□ -0.6
MSRA-210ENST00000528246 USP17L2Q6R6M4 530 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 MMS22LQ6ZRQ5 1243 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 TEX11Q8IYF3 940 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 USP38Q8NB14 1042 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 SMCR8Q8TEV9 937 aaPredicted RBP11.29□□□□□ -0.6
MSRA-210ENST00000528246 LMBR1Q8WVP7 490 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 CUL5Q93034 780 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 LRRC45Q96CN5 670 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 ZIM3Q96PE6 472 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 ISCUQ9H1K1 167 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 GANQ9H2C0 597 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 KCTD10Q9H3F6 313 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 PANK4Q9NVE7 773 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 BIN2Q9UBW5 565 aaPredicted RBP11.29□□□□□ -0.6
MSRA-210ENST00000528246 SALL4Q9UJQ4 1053 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 TRAF3IP3Q9Y228 551 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.29□□□□□ -0.6
MSRA-210ENST00000528246 FAM169AQ9Y6X4 670 aa11.29□□□□□ -0.6
MSRA-210ENST00000528246 GREB1LQ9C091 1923 aaPredicted RBP11.28□□□□□ -0.6
MSRA-210ENST00000528246 TRAF5O00463 557 aa11.28□□□□□ -0.6
MSRA-210ENST00000528246 SLC37A4O43826 429 aa11.28□□□□□ -0.6
MSRA-210ENST00000528246 ERLIN2O94905 339 aa11.28□□□□□ -0.6
MSRA-210ENST00000528246 HEXIM1O94992 359 aaKnown RBP11.28□□□□□ -0.6
MSRA-210ENST00000528246 GOLGA8HP0CJ92 632 aa11.28□□□□□ -0.6
MSRA-210ENST00000528246 HMGB2P26583 209 aaKnown RBP11.28□□□□□ -0.6
MSRA-210ENST00000528246 BIRC3Q13489 604 aa11.28□□□□□ -0.6
MSRA-210ENST00000528246 MTMR3Q13615 1198 aa11.28□□□□□ -0.6
MSRA-210ENST00000528246 PLCB4Q15147 1175 aa11.28□□□□□ -0.6
MSRA-210ENST00000528246 TDRD12Q587J7 1177 aaKnown RBP11.28□□□□□ -0.6
MSRA-210ENST00000528246 TTMPQ5BVD1 217 aa11.28□□□□□ -0.6
MSRA-210ENST00000528246 ARMC9Q7Z3E5 817 aa11.28□□□□□ -0.6
MSRA-210ENST00000528246 AMIGO3Q86WK7 504 aa11.28□□□□□ -0.6
MSRA-210ENST00000528246 GSPT2Q8IYD1 628 aaKnown RBP11.28□□□□□ -0.6
MSRA-210ENST00000528246 SLFN12Q8IYM2 578 aa11.28□□□□□ -0.6
MSRA-210ENST00000528246 TSEN2Q8NCE0 465 aaKnown RBP11.28□□□□□ -0.6
MSRA-210ENST00000528246 SLC44A5Q8NCS7 719 aa11.28□□□□□ -0.6
MSRA-210ENST00000528246 SCFD2Q8WU76 684 aa11.28□□□□□ -0.6
MSRA-210ENST00000528246 ATP6V1G3Q96LB4 118 aa11.28□□□□□ -0.6
MSRA-210ENST00000528246 CEP89Q96ST8 783 aa11.28□□□□□ -0.6
MSRA-210ENST00000528246 EPN3Q9H201 632 aa11.28□□□□□ -0.6
MSRA-210ENST00000528246 TAF1DQ9H5J8 278 aaPredicted RBP11.28□□□□□ -0.6
MSRA-210ENST00000528246 DDX25Q9UHL0 483 aaKnown RBP11.28□□□□□ -0.6
MSRA-210ENST00000528246 TTC7AQ9ULT0 858 aaPredicted RBP11.28□□□□□ -0.6
MSRA-210ENST00000528246 DIS3Q9Y2L1 958 aaKnown RBP11.28□□□□□ -0.6
MSRA-210ENST00000528246 CETN3O15182 167 aa11.27□□□□□ -0.61
MSRA-210ENST00000528246 SLC16A3O15427 465 aaKnown RBP11.27□□□□□ -0.61
MSRA-210ENST00000528246 PALMO75781 387 aa11.27□□□□□ -0.61
MSRA-210ENST00000528246 FSBPO95073 299 aa11.27□□□□□ -0.61
MSRA-210ENST00000528246 GLI1P08151 1106 aa11.27□□□□□ -0.61
MSRA-210ENST00000528246 KLHL30Q0D2K2 578 aa11.27□□□□□ -0.61
MSRA-210ENST00000528246 ASIC2Q16515 512 aa11.27□□□□□ -0.61
MSRA-210ENST00000528246 NFIL3Q16649 462 aa11.27□□□□□ -0.61
MSRA-210ENST00000528246 BMT2Q1RMZ1 405 aa11.27□□□□□ -0.61
MSRA-210ENST00000528246 TMC4Q7Z404 712 aa11.27□□□□□ -0.61
MSRA-210ENST00000528246 TAX1BP1Q86VP1 789 aa11.27□□□□□ -0.61
MSRA-210ENST00000528246 PACS2Q86VP3 889 aa11.27□□□□□ -0.61
MSRA-210ENST00000528246 MAPKAPK5Q8IW41 473 aa11.27□□□□□ -0.61
MSRA-210ENST00000528246 SYCE1Q8N0S2 351 aa11.27□□□□□ -0.61
MSRA-210ENST00000528246 FLAD1Q8NFF5 587 aa11.27□□□□□ -0.61
MSRA-210ENST00000528246 NLGN2Q8NFZ4 835 aa11.27□□□□□ -0.61
MSRA-210ENST00000528246 SEC14L1Q92503 715 aa11.27□□□□□ -0.61
MSRA-210ENST00000528246 TAF4BQ92750 862 aa11.27□□□□□ -0.61
MSRA-210ENST00000528246 HAS1Q92839 578 aa11.27□□□□□ -0.61
MSRA-210ENST00000528246 TANGO6Q9C0B7 1094 aa11.27□□□□□ -0.61
MSRA-210ENST00000528246 SLITRK6Q9H5Y7 841 aa11.27□□□□□ -0.61
MSRA-210ENST00000528246 METTL14Q9HCE5 456 aaKnown RBP11.27□□□□□ -0.61
MSRA-210ENST00000528246 CD209Q9NNX6 404 aa11.27□□□□□ -0.61
MSRA-210ENST00000528246 ANKIB1Q9P2G1 1089 aa11.27□□□□□ -0.61
MSRA-210ENST00000528246 NENFQ9UMX5 172 aa11.27□□□□□ -0.61
MSRA-210ENST00000528246 PCDHA12Q9UN75 941 aa11.27□□□□□ -0.61
MSRA-210ENST00000528246 MYH10P35580 1976 aa11.27□□□□□ -0.61
MSRA-210ENST00000528246 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.26□□□□□ -0.61
MSRA-210ENST00000528246 ZNF233A6NK53 670 aa11.26□□□□□ -0.61
MSRA-210ENST00000528246 USP17L5A8MUK1 530 aa11.26□□□□□ -0.61
MSRA-210ENST00000528246 NKRFO15226 690 aaKnown RBP eCLIP11.26□□□□□ -0.61
MSRA-210ENST00000528246 TDP2O95551 362 aa11.26□□□□□ -0.61
MSRA-210ENST00000528246 TTLL1O95922 423 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms