RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 TRIM71Q2Q1W2 868 aaKnown RBP22.02■■□□□ 1.12
CAPN1-211ENST00000527739 PPP2R2DQ66LE6 453 aa22.02■■□□□ 1.12
CAPN1-211ENST00000527739 RUFY3Q7L099 469 aa22.02■■□□□ 1.12
CAPN1-211ENST00000527739 SERINC5Q86VE9 423 aa22.02■■□□□ 1.12
CAPN1-211ENST00000527739 CYP2W1Q8TAV3 490 aa22.02■■□□□ 1.12
CAPN1-211ENST00000527739 GLG1Q92896 1179 aa22.02■■□□□ 1.12
CAPN1-211ENST00000527739 PHKBQ93100 1093 aa22.02■■□□□ 1.12
CAPN1-211ENST00000527739 SLC9A7Q96T83 725 aa22.02■■□□□ 1.12
CAPN1-211ENST00000527739 CYP46A1Q9Y6A2 500 aa22.02■■□□□ 1.12
CAPN1-211ENST00000527739 MYH7BA7E2Y1 1941 aa22.02■■□□□ 1.11
CAPN1-211ENST00000527739 RSPH10B2B2RC85 870 aa22.01■■□□□ 1.11
CAPN1-211ENST00000527739 KIF28PB7ZC32 967 aa22.01■■□□□ 1.11
CAPN1-211ENST00000527739 RSPH10BP0C881 870 aa22.01■■□□□ 1.11
CAPN1-211ENST00000527739 GPNMBQ14956 572 aa22.01■■□□□ 1.11
CAPN1-211ENST00000527739 SLC26A6Q9BXS9 759 aa22.01■■□□□ 1.11
CAPN1-211ENST00000527739 C6orf50Q9HD87 102 aa22.01■■□□□ 1.11
CAPN1-211ENST00000527739 KCNH7Q9NS40 1196 aa22.01■■□□□ 1.11
CAPN1-211ENST00000527739 MYO9BQ13459 2157 aa22■■□□□ 1.11
CAPN1-211ENST00000527739 GSTTP1A0A1W2PQM5 241 aa22■■□□□ 1.11
CAPN1-211ENST00000527739 RBAK-RBAKDNI3L0D1 243 aa22■■□□□ 1.11
CAPN1-211ENST00000527739 PRPF3O43395 683 aaKnown RBP22■■□□□ 1.11
CAPN1-211ENST00000527739 BAIAP3O94812 1187 aa22■■□□□ 1.11
CAPN1-211ENST00000527739 MARK3P27448 753 aa22■■□□□ 1.11
CAPN1-211ENST00000527739 PDIA3P30101 505 aaKnown RBP22■■□□□ 1.11
CAPN1-211ENST00000527739 AP3B2Q13367 1082 aa22■■□□□ 1.11
CAPN1-211ENST00000527739 CNKSR3Q6P9H4 555 aa22■■□□□ 1.11
CAPN1-211ENST00000527739 PHOSPHO2Q8TCD6 241 aa22■■□□□ 1.11
CAPN1-211ENST00000527739 CCDC12Q8WUD4 166 aaPredicted RBP22■■□□□ 1.11
CAPN1-211ENST00000527739 SDF4Q9BRK5 362 aa22■■□□□ 1.11
CAPN1-211ENST00000527739 LARP6Q9BRS8 491 aaKnown RBP22■■□□□ 1.11
CAPN1-211ENST00000527739 ZBED2Q9BTP6 218 aa22■■□□□ 1.11
CAPN1-211ENST00000527739 NCOA5Q9HCD5 579 aaKnown RBP22■■□□□ 1.11
CAPN1-211ENST00000527739 ZSWIM6Q9HCJ5 1215 aa22■■□□□ 1.11
CAPN1-211ENST00000527739 JPH1Q9HDC5 661 aaPredicted RBP22■■□□□ 1.11
CAPN1-211ENST00000527739 EPB41L2O43491 1005 aaKnown RBP21.99■■□□□ 1.11
CAPN1-211ENST00000527739 CTSHP09668 335 aa21.99■■□□□ 1.11
CAPN1-211ENST00000527739 ARP10275 920 aa21.99■■□□□ 1.11
CAPN1-211ENST00000527739 IKBKEQ14164 716 aa21.99■■□□□ 1.11
CAPN1-211ENST00000527739 CEP55Q53EZ4 464 aa21.99■■□□□ 1.11
CAPN1-211ENST00000527739 HERC6Q8IVU3 1022 aa21.99■■□□□ 1.11
CAPN1-211ENST00000527739 TEX2Q8IWB9 1127 aa21.99■■□□□ 1.11
CAPN1-211ENST00000527739 FBXL16Q8N461 479 aa21.99■■□□□ 1.11
CAPN1-211ENST00000527739 AGXT2Q9BYV1 514 aa21.99■■□□□ 1.11
CAPN1-211ENST00000527739 UPF3BQ9BZI7 483 aaKnown RBP21.99■■□□□ 1.11
CAPN1-211ENST00000527739 SLC9A2Q9UBY0 812 aa21.99■■□□□ 1.11
CAPN1-211ENST00000527739 SCN5AQ14524 2016 aa21.99■■□□□ 1.11
CAPN1-211ENST00000527739 TNFRSF10AO00220 468 aa21.98■■□□□ 1.11
CAPN1-211ENST00000527739 CXCL10P02778 98 aa21.98■■□□□ 1.11
CAPN1-211ENST00000527739 CA3P07451 260 aa21.98■■□□□ 1.11
CAPN1-211ENST00000527739 PKN1Q16512 942 aa21.98■■□□□ 1.11
CAPN1-211ENST00000527739 TRAF7Q6Q0C0 670 aa21.98■■□□□ 1.11
CAPN1-211ENST00000527739 SMARCAD1Q9H4L7 1026 aa21.98■■□□□ 1.11
CAPN1-211ENST00000527739 AZI2Q9H6S1 392 aa21.98■■□□□ 1.11
CAPN1-211ENST00000527739 ERAP1Q9NZ08 941 aa21.98■■□□□ 1.11
CAPN1-211ENST00000527739 THEGQ9P2T0 379 aa21.98■■□□□ 1.11
CAPN1-211ENST00000527739 TLL1O43897 1013 aa21.97■■□□□ 1.11
CAPN1-211ENST00000527739 LGR5O75473 907 aa21.97■■□□□ 1.11
CAPN1-211ENST00000527739 GNA11P29992 359 aa21.97■■□□□ 1.11
CAPN1-211ENST00000527739 SREBF1P36956 1147 aa21.97■■□□□ 1.11
CAPN1-211ENST00000527739 CLK2P49760 499 aaKnown RBP21.97■■□□□ 1.11
CAPN1-211ENST00000527739 WDR5P61964 334 aaKnown RBP21.97■■□□□ 1.11
CAPN1-211ENST00000527739 PPFIA1Q13136 1202 aa21.97■■□□□ 1.11
CAPN1-211ENST00000527739 TOB2Q14106 344 aaPredicted RBP21.97■■□□□ 1.11
CAPN1-211ENST00000527739 TCTN1Q2MV58 587 aa21.97■■□□□ 1.11
CAPN1-211ENST00000527739 ERICH6BQ5W0A0 696 aa21.97■■□□□ 1.11
CAPN1-211ENST00000527739 TMCO2Q7Z6W1 182 aaPredicted RBP21.97■■□□□ 1.11
CAPN1-211ENST00000527739 LMBR1Q8WVP7 490 aa21.97■■□□□ 1.11
CAPN1-211ENST00000527739 ATXN2LQ8WWM7 1075 aaKnown RBP21.97■■□□□ 1.11
CAPN1-211ENST00000527739 ASB2Q96Q27 587 aa21.97■■□□□ 1.11
CAPN1-211ENST00000527739 UIMC1Q96RL1 719 aa21.97■■□□□ 1.11
CAPN1-211ENST00000527739 CERS4Q9HA82 394 aa21.97■■□□□ 1.11
CAPN1-211ENST00000527739 PDRG1Q9NUG6 133 aa21.97■■□□□ 1.11
CAPN1-211ENST00000527739 NRCAMQ92823 1304 aa21.97■■□□□ 1.11
CAPN1-211ENST00000527739 REV3LO60673 3130 aa21.97■■□□□ 1.11
CAPN1-211ENST00000527739 ABHD14A-ACY1A0A1B0GW23 586 aa21.96■■□□□ 1.11
CAPN1-211ENST00000527739 DDX39AO00148 427 aaKnown RBP21.96■■□□□ 1.11
CAPN1-211ENST00000527739 CPLX1O14810 134 aa21.96■■□□□ 1.11
CAPN1-211ENST00000527739 CENPBP07199 599 aaPredicted RBP21.96■■□□□ 1.11
CAPN1-211ENST00000527739 HOXC8P31273 242 aa21.96■■□□□ 1.11
CAPN1-211ENST00000527739 IGBP1P78318 339 aa21.96■■□□□ 1.11
CAPN1-211ENST00000527739 STK3Q13188 491 aa21.96■■□□□ 1.11
CAPN1-211ENST00000527739 MBTPS1Q14703 1052 aa21.96■■□□□ 1.11
CAPN1-211ENST00000527739 FAM117BQ6P1L5 589 aa21.96■■□□□ 1.11
CAPN1-211ENST00000527739 PLA2G4DQ86XP0 818 aa21.96■■□□□ 1.11
CAPN1-211ENST00000527739 REXO1Q8N1G1 1221 aaKnown RBP21.96■■□□□ 1.11
CAPN1-211ENST00000527739 ZMYND12Q9H0C1 365 aa21.96■■□□□ 1.11
CAPN1-211ENST00000527739 AGO4Q9HCK5 861 aaKnown RBP21.96■■□□□ 1.11
CAPN1-211ENST00000527739 EMSYQ7Z589 1322 aa21.96■■□□□ 1.11
CAPN1-211ENST00000527739 RFXAPO00287 272 aa21.95■■□□□ 1.1
CAPN1-211ENST00000527739 MEIS1O00470 390 aa21.95■■□□□ 1.1
CAPN1-211ENST00000527739 IFNAR1P17181 557 aa21.95■■□□□ 1.1
CAPN1-211ENST00000527739 DEFB103AP81534 67 aa21.95■■□□□ 1.1
CAPN1-211ENST00000527739 SSRP1Q08945 709 aaKnown RBP21.95■■□□□ 1.1
CAPN1-211ENST00000527739 NTRK3Q16288 839 aa21.95■■□□□ 1.1
CAPN1-211ENST00000527739 TRIM22Q8IYM9 498 aa21.95■■□□□ 1.1
CAPN1-211ENST00000527739 MICALL1Q8N3F8 863 aa21.95■■□□□ 1.1
CAPN1-211ENST00000527739 DBF4BQ8NFT6 615 aa21.95■■□□□ 1.1
CAPN1-211ENST00000527739 RNF26Q9BY78 433 aaPredicted RBP21.95■■□□□ 1.1
CAPN1-211ENST00000527739 TM6SF1Q9BZW5 370 aa21.95■■□□□ 1.1
CAPN1-211ENST00000527739 VPS54Q9P1Q0 977 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms