RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 AMNQ9BXJ7 453 aa11.5□□□□□ -0.57
CAPN1-210ENST00000527699 KRT23Q9C075 422 aa11.5□□□□□ -0.57
CAPN1-210ENST00000527699 MLXIPQ9HAP2 919 aa11.5□□□□□ -0.57
CAPN1-210ENST00000527699 RTEL1Q9NZ71 1219 aa11.5□□□□□ -0.57
CAPN1-210ENST00000527699 MAD2L2Q9UI95 211 aa11.5□□□□□ -0.57
CAPN1-210ENST00000527699 PCDHA1Q9Y5I3 950 aa11.5□□□□□ -0.57
CAPN1-210ENST00000527699 CEP250Q9BV73 2442 aa11.49□□□□□ -0.57
CAPN1-210ENST00000527699 USP24Q9UPU5 2620 aa11.49□□□□□ -0.57
CAPN1-210ENST00000527699 LINC01553A4QN01 128 aa11.49□□□□□ -0.57
CAPN1-210ENST00000527699 MBTPS2O43462 519 aa11.49□□□□□ -0.57
CAPN1-210ENST00000527699 HSD17B4P51659 736 aa11.49□□□□□ -0.57
CAPN1-210ENST00000527699 NUBP1P53384 320 aa11.49□□□□□ -0.57
CAPN1-210ENST00000527699 PTK7Q13308 1070 aa11.49□□□□□ -0.57
CAPN1-210ENST00000527699 IKBKEQ14164 716 aa11.49□□□□□ -0.57
CAPN1-210ENST00000527699 CELF3Q5SZQ8 465 aaKnown RBP11.49□□□□□ -0.57
CAPN1-210ENST00000527699 UTP14CQ5TAP6 766 aaKnown RBP11.49□□□□□ -0.57
CAPN1-210ENST00000527699 TRAF7Q6Q0C0 670 aa11.49□□□□□ -0.57
CAPN1-210ENST00000527699 RPAINQ86UA6 219 aa11.49□□□□□ -0.57
CAPN1-210ENST00000527699 SESTD1Q86VW0 696 aa11.49□□□□□ -0.57
CAPN1-210ENST00000527699 SMC5Q8IY18 1101 aa11.49□□□□□ -0.57
CAPN1-210ENST00000527699 DBF4BQ8NFT6 615 aa11.49□□□□□ -0.57
CAPN1-210ENST00000527699 PPTC7Q8NI37 304 aa11.49□□□□□ -0.57
CAPN1-210ENST00000527699 MRPL38Q96DV4 380 aaKnown RBP11.49□□□□□ -0.57
CAPN1-210ENST00000527699 DSCC1Q9BVC3 393 aa11.49□□□□□ -0.57
CAPN1-210ENST00000527699 SH2B1Q9NRF2 756 aaPredicted RBP11.49□□□□□ -0.57
CAPN1-210ENST00000527699 TAF6LQ9Y6J9 622 aa11.49□□□□□ -0.57
CAPN1-210ENST00000527699 GPR179Q6PRD1 2367 aa11.49□□□□□ -0.57
CAPN1-210ENST00000527699 ZNF292O60281 2723 aa11.49□□□□□ -0.57
CAPN1-210ENST00000527699 MYO7AQ13402 2215 aa11.48□□□□□ -0.57
CAPN1-210ENST00000527699 C17orf102A2RUQ5 167 aa11.48□□□□□ -0.57
CAPN1-210ENST00000527699 HAS3O00219 553 aa11.48□□□□□ -0.57
CAPN1-210ENST00000527699 ZBTB5O15062 677 aa11.48□□□□□ -0.57
CAPN1-210ENST00000527699 TREHO43280 583 aa11.48□□□□□ -0.57
CAPN1-210ENST00000527699 GJB5O95377 273 aa11.48□□□□□ -0.57
CAPN1-210ENST00000527699 F2P00734 622 aa11.48□□□□□ -0.57
CAPN1-210ENST00000527699 CXCL10P02778 98 aa11.48□□□□□ -0.57
CAPN1-210ENST00000527699 HOXB3P14651 431 aaPredicted RBP11.48□□□□□ -0.57
CAPN1-210ENST00000527699 UBA1P22314 1058 aaKnown RBP11.48□□□□□ -0.57
CAPN1-210ENST00000527699 PTH1RQ03431 593 aa11.48□□□□□ -0.57
CAPN1-210ENST00000527699 SEC23AQ15436 765 aa11.48□□□□□ -0.57
CAPN1-210ENST00000527699 MYSM1Q5VVJ2 828 aa11.48□□□□□ -0.57
CAPN1-210ENST00000527699 ATP6V0A1Q93050 837 aa11.48□□□□□ -0.57
CAPN1-210ENST00000527699 RAD9AQ99638 391 aa11.48□□□□□ -0.57
CAPN1-210ENST00000527699 KATNAL1Q9BW62 490 aa11.48□□□□□ -0.57
CAPN1-210ENST00000527699 SETXQ7Z333 2677 aaKnown RBP11.47□□□□□ -0.57
CAPN1-210ENST00000527699 MYH7BA7E2Y1 1941 aa11.47□□□□□ -0.57
CAPN1-210ENST00000527699 ABHD14A-ACY1A0A1B0GW23 586 aa11.47□□□□□ -0.57
CAPN1-210ENST00000527699 RSPH10B2B2RC85 870 aa11.47□□□□□ -0.57
CAPN1-210ENST00000527699 GCOM1H8Y6P7 765 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-210ENST00000527699 IFIT3O14879 490 aaKnown RBP11.47□□□□□ -0.57
CAPN1-210ENST00000527699 LGR5O75473 907 aa11.47□□□□□ -0.57
CAPN1-210ENST00000527699 PDGFBP01127 241 aaPredicted RBP11.47□□□□□ -0.57
CAPN1-210ENST00000527699 RSPH10BP0C881 870 aa11.47□□□□□ -0.57
CAPN1-210ENST00000527699 POLR2MP0CAP2 368 aa11.47□□□□□ -0.57
CAPN1-210ENST00000527699 SMIM10L2AP0DMW4 78 aa11.47□□□□□ -0.57
CAPN1-210ENST00000527699 SMIM10L2BP0DMW5 78 aa11.47□□□□□ -0.57
CAPN1-210ENST00000527699 PDE4AP27815 886 aa11.47□□□□□ -0.57
CAPN1-210ENST00000527699 CCND2P30279 289 aa11.47□□□□□ -0.57
CAPN1-210ENST00000527699 CYFIP1Q7L576 1253 aa11.47□□□□□ -0.57
CAPN1-210ENST00000527699 TRIM50Q86XT4 487 aa11.47□□□□□ -0.57
CAPN1-210ENST00000527699 RAB11FIP4Q86YS3 637 aa11.47□□□□□ -0.57
CAPN1-210ENST00000527699 C16orf70Q9BSU1 422 aa11.47□□□□□ -0.57
CAPN1-210ENST00000527699 MYL10Q9BUA6 226 aa11.47□□□□□ -0.57
CAPN1-210ENST00000527699 CNNM2Q9H8M5 875 aa11.47□□□□□ -0.57
CAPN1-210ENST00000527699 SETD4Q9NVD3 440 aa11.47□□□□□ -0.57
CAPN1-210ENST00000527699 KIAA1217Q5T5P2 1943 aa11.47□□□□□ -0.57
CAPN1-210ENST00000527699 LAMA4Q16363 1823 aa11.46□□□□□ -0.57
CAPN1-210ENST00000527699 HIP1O00291 1037 aa11.46□□□□□ -0.57
CAPN1-210ENST00000527699 AMHP03971 560 aa11.46□□□□□ -0.57
CAPN1-210ENST00000527699 LGALS2P05162 132 aa11.46□□□□□ -0.57
CAPN1-210ENST00000527699 IRX6P78412 446 aaPredicted RBP11.46□□□□□ -0.57
CAPN1-210ENST00000527699 SMAD4Q13485 552 aaKnown RBP11.46□□□□□ -0.57
CAPN1-210ENST00000527699 GRM4Q14833 912 aa11.46□□□□□ -0.57
CAPN1-210ENST00000527699 ZBTB33Q86T24 672 aa11.46□□□□□ -0.57
CAPN1-210ENST00000527699 VSIG10LQ86VR7 867 aa11.46□□□□□ -0.57
CAPN1-210ENST00000527699 EMID1Q96A84 441 aaPredicted RBP11.46□□□□□ -0.57
CAPN1-210ENST00000527699 ASIC4Q96FT7 647 aa11.46□□□□□ -0.57
CAPN1-210ENST00000527699 RNPEPQ9H4A4 650 aa11.46□□□□□ -0.57
CAPN1-210ENST00000527699 OSBPL3Q9H4L5 887 aa11.46□□□□□ -0.57
CAPN1-210ENST00000527699 NSUN3Q9H649 340 aaKnown RBP11.46□□□□□ -0.57
CAPN1-210ENST00000527699 PKD2L1Q9P0L9 805 aa11.46□□□□□ -0.57
CAPN1-210ENST00000527699 MYH6P13533 1939 aa11.45□□□□□ -0.58
CAPN1-210ENST00000527699 PALM3A6NDB9 673 aaPredicted RBP11.45□□□□□ -0.58
CAPN1-210ENST00000527699 H3BRB1 525 aa11.45□□□□□ -0.58
CAPN1-210ENST00000527699 NOP56O00567 594 aaKnown RBP11.45□□□□□ -0.58
CAPN1-210ENST00000527699 CYTH3O43739 400 aa11.45□□□□□ -0.58
CAPN1-210ENST00000527699 PPFIA4O75335 1185 aa11.45□□□□□ -0.58
CAPN1-210ENST00000527699 CYP21A2P08686 494 aa11.45□□□□□ -0.58
CAPN1-210ENST00000527699 GSPT1P15170 499 aaKnown RBP11.45□□□□□ -0.58
CAPN1-210ENST00000527699 IBSPP21815 317 aaPredicted RBP11.45□□□□□ -0.58
CAPN1-210ENST00000527699 MRPS9P82933 396 aaKnown RBP11.45□□□□□ -0.58
CAPN1-210ENST00000527699 RBL2Q08999 1139 aa11.45□□□□□ -0.58
CAPN1-210ENST00000527699 WTAPQ15007 396 aa11.45□□□□□ -0.58
CAPN1-210ENST00000527699 USP17L6PQ6QN14 398 aa11.45□□□□□ -0.58
CAPN1-210ENST00000527699 STOX1Q6ZVD7 989 aa11.45□□□□□ -0.58
CAPN1-210ENST00000527699 CMTR1Q8N1G2 835 aaKnown RBP11.45□□□□□ -0.58
CAPN1-210ENST00000527699 ZBTB10Q96DT7 871 aa11.45□□□□□ -0.58
CAPN1-210ENST00000527699 MTMR8Q96EF0 704 aa11.45□□□□□ -0.58
CAPN1-210ENST00000527699 TUT1Q9H6E5 874 aaKnown RBP11.45□□□□□ -0.58
CAPN1-210ENST00000527699 hCG_1642624A0A1W2PR95 340 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms