RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 CASKIN2Q8WXE0 1202 aa8.17□□□□□ -1.1
SOX6-208ENST00000527619 TSC22D3Q99576 134 aa8.17□□□□□ -1.1
SOX6-208ENST00000527619 MLXIPQ9HAP2 919 aa8.17□□□□□ -1.1
SOX6-208ENST00000527619 SLAIN2Q9P270 581 aa8.17□□□□□ -1.1
SOX6-208ENST00000527619 RNF14Q9UBS8 474 aa8.17□□□□□ -1.1
SOX6-208ENST00000527619 PDS5AQ29RF7 1337 aaKnown RBP8.17□□□□□ -1.1
SOX6-208ENST00000527619 GOLGA8AA7E2F4 631 aa8.17□□□□□ -1.1
SOX6-208ENST00000527619 H7C1D1 291 aa8.17□□□□□ -1.1
SOX6-208ENST00000527619 ZBTB43O43298 467 aa8.17□□□□□ -1.1
SOX6-208ENST00000527619 FGFR1OPO95684 399 aaKnown RBP8.17□□□□□ -1.1
SOX6-208ENST00000527619 ATP4AP20648 1035 aa8.17□□□□□ -1.1
SOX6-208ENST00000527619 ATICP31939 592 aa8.17□□□□□ -1.1
SOX6-208ENST00000527619 CDK17Q00537 523 aa8.17□□□□□ -1.1
SOX6-208ENST00000527619 AIMP1Q12904 312 aaKnown RBP8.17□□□□□ -1.1
SOX6-208ENST00000527619 EIF2B5Q13144 721 aaKnown RBP8.17□□□□□ -1.1
SOX6-208ENST00000527619 BTG3Q14201 252 aaPredicted RBP8.17□□□□□ -1.1
SOX6-208ENST00000527619 GCKRQ14397 625 aa8.17□□□□□ -1.1
SOX6-208ENST00000527619 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.17□□□□□ -1.1
SOX6-208ENST00000527619 ODF2Q5BJF6 829 aa8.17□□□□□ -1.1
SOX6-208ENST00000527619 ZCCHC8Q6NZY4 707 aaKnown RBP8.17□□□□□ -1.1
SOX6-208ENST00000527619 RIC3Q7Z5B4 369 aa8.17□□□□□ -1.1
SOX6-208ENST00000527619 TBC1D1Q86TI0 1168 aaPredicted RBP8.17□□□□□ -1.1
SOX6-208ENST00000527619 MICU3Q86XE3 530 aa8.17□□□□□ -1.1
SOX6-208ENST00000527619 TEX9Q8N6V9 391 aa8.17□□□□□ -1.1
SOX6-208ENST00000527619 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.17□□□□□ -1.1
SOX6-208ENST00000527619 UIMC1Q96RL1 719 aa8.17□□□□□ -1.1
SOX6-208ENST00000527619 PSMB7Q99436 277 aa8.17□□□□□ -1.1
SOX6-208ENST00000527619 SLC26A6Q9BXS9 759 aa8.17□□□□□ -1.1
SOX6-208ENST00000527619 TTYH3Q9C0H2 523 aa8.17□□□□□ -1.1
SOX6-208ENST00000527619 PANK4Q9NVE7 773 aa8.17□□□□□ -1.1
SOX6-208ENST00000527619 VPS54Q9P1Q0 977 aa8.17□□□□□ -1.1
SOX6-208ENST00000527619 XIRP1Q702N8 1843 aaKnown RBP8.16□□□□□ -1.1
SOX6-208ENST00000527619 ZSCAN5CA6NGD5 496 aaPredicted RBP8.16□□□□□ -1.1
SOX6-208ENST00000527619 PHF20L1A8MW92 1017 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 BACH1O14867 736 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 LSM1O15116 133 aaKnown RBP8.16□□□□□ -1.1
SOX6-208ENST00000527619 GNAT1P11488 350 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 HOXC9P31274 260 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 NEK2P51955 445 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 ITIH4Q14624 930 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 CCDC38Q502W7 563 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 SLC7A5P1Q8MH63 180 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 GBP7Q8N8V2 638 aaPredicted RBP8.16□□□□□ -1.1
SOX6-208ENST00000527619 NGDNQ8NEJ9 315 aaKnown RBP8.16□□□□□ -1.1
SOX6-208ENST00000527619 GIMAP1Q8WWP7 306 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 EPSTI1Q96J88 318 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 MOV10L1Q9BXT6 1211 aaKnown RBP8.16□□□□□ -1.1
SOX6-208ENST00000527619 OSBPL1AQ9BXW6 950 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 RPAP3Q9H6T3 665 aaPredicted RBP8.16□□□□□ -1.1
SOX6-208ENST00000527619 QPCTLQ9NXS2 382 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 PAIP2BQ9ULR5 123 aaKnown RBP8.16□□□□□ -1.1
SOX6-208ENST00000527619 F8W031 263 aaPredicted RBP8.16□□□□□ -1.1
SOX6-208ENST00000527619 H0YGN5 161 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 STXBP3O00186 592 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 BBOX1O75936 387 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 IFIT1P09914 478 aaKnown RBP8.16□□□□□ -1.1
SOX6-208ENST00000527619 EEF1GP26641 437 aaKnown RBP8.16□□□□□ -1.1
SOX6-208ENST00000527619 HSD17B3P37058 310 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 SCNN1AP37088 669 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 CTCFP49711 727 aaPredicted RBP8.16□□□□□ -1.1
SOX6-208ENST00000527619 DNM2P50570 870 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 USP11P51784 963 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 IFI16Q16666 785 aaKnown RBP8.16□□□□□ -1.1
SOX6-208ENST00000527619 PARP10Q53GL7 1025 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 APLFQ8IW19 511 aaPredicted RBP8.16□□□□□ -1.1
SOX6-208ENST00000527619 SYMPKQ92797 1274 aaKnown RBP8.16□□□□□ -1.1
SOX6-208ENST00000527619 HPS3Q969F9 1004 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 CHMP6Q96FZ7 201 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 CCDC42Q96M95 316 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 ANKRD27Q96NW4 1050 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 IFIH1Q9BYX4 1025 aaKnown RBP8.16□□□□□ -1.1
SOX6-208ENST00000527619 KCNMB3Q9NPA1 279 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 AGPAT5Q9NUQ2 364 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 TUBA8Q9NY65 449 aaPredicted RBP8.16□□□□□ -1.1
SOX6-208ENST00000527619 CNOT8Q9UFF9 292 aaKnown RBP8.16□□□□□ -1.1
SOX6-208ENST00000527619 IP6K2Q9UHH9 426 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 TSKSQ9UJT2 592 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 CROTQ9UKG9 612 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 KCNJ14Q9UNX9 436 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 PCDHA13Q9Y5I0 950 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 NFS1Q9Y697 457 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 LMO7Q8WWI1 1683 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 UBE2Q2LH0YL09 131 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 ZNF263O14978 683 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 NCK2O43639 380 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 TBC1D12O60347 775 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 SRGNP10124 158 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 NQO1P15559 274 aaKnown RBP8.16□□□□□ -1.1
SOX6-208ENST00000527619 PSMD7P51665 324 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 CCNG1P51959 295 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 ZNF844Q08AG5 666 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 SEPT2Q15019 361 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 RABL6Q3YEC7 729 aaPredicted RBP8.16□□□□□ -1.1
SOX6-208ENST00000527619 ZNF658Q5TYW1 1059 aaPredicted RBP8.16□□□□□ -1.1
SOX6-208ENST00000527619 DPY19L2Q6NUT2 758 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 NEK10Q6ZWH5 1172 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 CACNA2D4Q7Z3S7 1137 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 IRF2BP1Q8IU81 584 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 GALNT15Q8N3T1 639 aa8.16□□□□□ -1.1
SOX6-208ENST00000527619 VMP1Q96GC9 406 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms