RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 CCP110O43303 1012 aa18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 MUTP22033 750 aa18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 COPB1P53618 953 aaKnown RBP18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 TBX2Q13207 712 aaPredicted RBP18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 BAATQ14032 418 aaPredicted RBP18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 PGM5Q15124 567 aa18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 PTPN21Q16825 1174 aa18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 TPH2Q8IWU9 490 aa18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 IL31RAQ8NI17 732 aa18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 CDCA5Q96FF9 252 aa18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 DUSP9Q99956 384 aaKnown RBP18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 JADE2Q9NQC1 790 aa18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 ZC3H4Q9UPT8 1303 aaKnown RBP18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 GLTPD2A6NH11 291 aa18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 SLITRK3O94933 977 aa18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 EYA4O95677 639 aa18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 MTMR1Q13613 665 aa18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 TTLL12Q14166 644 aaPredicted RBP18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 CTTNQ14247 550 aaKnown RBP18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 EPHA7Q15375 998 aa18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 HERC4Q5GLZ8 1057 aaPredicted RBP18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 FAM26FQ5R3K3 315 aa18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 IRF2BP1Q8IU81 584 aa18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 ANKRD13AQ8IZ07 590 aa18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 DYDC2Q96IM9 177 aa18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 VPS16Q9H269 839 aa18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 PXMP2Q9NR77 195 aa18.01■□□□□ 0.47
SNRNP35-204ENST00000527158 SPDYE16A6NNV3 312 aaPredicted RBP18■□□□□ 0.47
SNRNP35-204ENST00000527158 FGFR1OPO95684 399 aaKnown RBP18■□□□□ 0.47
SNRNP35-204ENST00000527158 MYCLP12524 364 aaPredicted RBP18■□□□□ 0.47
SNRNP35-204ENST00000527158 MRPS9P82933 396 aaKnown RBP18■□□□□ 0.47
SNRNP35-204ENST00000527158 PPATQ06203 517 aa18■□□□□ 0.47
SNRNP35-204ENST00000527158 PLS1Q14651 629 aa18■□□□□ 0.47
SNRNP35-204ENST00000527158 ARSHQ5FYA8 562 aa18■□□□□ 0.47
SNRNP35-204ENST00000527158 XRRA1Q6P2D8 792 aa18■□□□□ 0.47
SNRNP35-204ENST00000527158 MYOCDQ8IZQ8 938 aa18■□□□□ 0.47
SNRNP35-204ENST00000527158 TSC1Q92574 1164 aa18■□□□□ 0.47
SNRNP35-204ENST00000527158 PDCD2LQ9BRP1 358 aa18■□□□□ 0.47
SNRNP35-204ENST00000527158 MAF1Q9H063 256 aa18■□□□□ 0.47
SNRNP35-204ENST00000527158 BHMT2Q9H2M3 363 aa18■□□□□ 0.47
SNRNP35-204ENST00000527158 SEMA6BQ9H3T3 888 aa18■□□□□ 0.47
SNRNP35-204ENST00000527158 UNC45AQ9H3U1 944 aa18■□□□□ 0.47
SNRNP35-204ENST00000527158 TAB2Q9NYJ8 693 aa18■□□□□ 0.47
SNRNP35-204ENST00000527158 NPHP3-ACAD11A0A0J9YXS1 232 aa18■□□□□ 0.47
SNRNP35-204ENST00000527158 KIF20AO95235 890 aa18■□□□□ 0.47
SNRNP35-204ENST00000527158 LRRC63Q05C16 580 aa18■□□□□ 0.47
SNRNP35-204ENST00000527158 ERO1BQ86YB8 467 aa18■□□□□ 0.47
SNRNP35-204ENST00000527158 CCAR2Q8N163 923 aaKnown RBP18■□□□□ 0.47
SNRNP35-204ENST00000527158 ACAD9Q9H845 621 aa18■□□□□ 0.47
SNRNP35-204ENST00000527158 ELP3Q9H9T3 547 aa18■□□□□ 0.47
SNRNP35-204ENST00000527158 AGO4Q9HCK5 861 aaKnown RBP18■□□□□ 0.47
SNRNP35-204ENST00000527158 PARP14Q460N5 1801 aa17.99■□□□□ 0.47
SNRNP35-204ENST00000527158 IQCA1LA6NCM1 817 aa17.99■□□□□ 0.47
SNRNP35-204ENST00000527158 NCBP1Q09161 790 aaKnown RBP17.99■□□□□ 0.47
SNRNP35-204ENST00000527158 RAD51AP2Q09MP3 1159 aa17.99■□□□□ 0.47
SNRNP35-204ENST00000527158 UTP14CQ5TAP6 766 aaKnown RBP17.99■□□□□ 0.47
SNRNP35-204ENST00000527158 B3GNT9Q6UX72 402 aa17.99■□□□□ 0.47
SNRNP35-204ENST00000527158 PPFIBP1Q86W92 1011 aa17.99■□□□□ 0.47
SNRNP35-204ENST00000527158 KIF18AQ8NI77 898 aa17.99■□□□□ 0.47
SNRNP35-204ENST00000527158 NEK9Q8TD19 979 aa17.99■□□□□ 0.47
SNRNP35-204ENST00000527158 TSG101Q99816 390 aa17.99■□□□□ 0.47
SNRNP35-204ENST00000527158 ZHX3Q9H4I2 956 aa17.99■□□□□ 0.47
SNRNP35-204ENST00000527158 TBC1D22BQ9NU19 505 aa17.99■□□□□ 0.47
SNRNP35-204ENST00000527158 FRMD3A2A2Y4 597 aa17.98■□□□□ 0.47
SNRNP35-204ENST00000527158 GRIN3BO60391 1043 aa17.98■□□□□ 0.47
SNRNP35-204ENST00000527158 PBX1P40424 430 aa17.98■□□□□ 0.47
SNRNP35-204ENST00000527158 CACNB1Q02641 598 aaPredicted RBP17.98■□□□□ 0.47
SNRNP35-204ENST00000527158 GIT2Q14161 759 aa17.98■□□□□ 0.47
SNRNP35-204ENST00000527158 CNKSR2Q8WXI2 1034 aa17.98■□□□□ 0.47
SNRNP35-204ENST00000527158 NACC1Q96RE7 527 aa17.98■□□□□ 0.47
SNRNP35-204ENST00000527158 PKD2L1Q9P0L9 805 aa17.98■□□□□ 0.47
SNRNP35-204ENST00000527158 CCND2P30279 289 aa17.98■□□□□ 0.47
SNRNP35-204ENST00000527158 LRRC41Q15345 812 aa17.98■□□□□ 0.47
SNRNP35-204ENST00000527158 EAPPQ56P03 285 aaPredicted RBP17.98■□□□□ 0.47
SNRNP35-204ENST00000527158 TREML2Q5T2D2 321 aa17.98■□□□□ 0.47
SNRNP35-204ENST00000527158 FOXR2Q6PJQ5 311 aa17.98■□□□□ 0.47
SNRNP35-204ENST00000527158 NSUN6Q8TEA1 469 aaKnown RBP17.98■□□□□ 0.47
SNRNP35-204ENST00000527158 OTUD5Q96G74 571 aa17.98■□□□□ 0.47
SNRNP35-204ENST00000527158 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.98■□□□□ 0.473e-11■■■□□ 17.2
SNRNP35-204ENST00000527158 DDX39AO00148 427 aaKnown RBP17.97■□□□□ 0.47
SNRNP35-204ENST00000527158 CXCL11O14625 94 aa17.97■□□□□ 0.47
SNRNP35-204ENST00000527158 TPM1P09493 284 aa17.97■□□□□ 0.47
SNRNP35-204ENST00000527158 UBXN1Q04323 297 aa17.97■□□□□ 0.47
SNRNP35-204ENST00000527158 GADL1Q6ZQY3 521 aa17.97■□□□□ 0.47
SNRNP35-204ENST00000527158 MIER3Q7Z3K6 550 aa17.97■□□□□ 0.47
SNRNP35-204ENST00000527158 PROCA1Q8NCQ7 364 aaPredicted RBP17.97■□□□□ 0.47
SNRNP35-204ENST00000527158 PIGOQ8TEQ8 1089 aa17.97■□□□□ 0.47
SNRNP35-204ENST00000527158 TBC1D7Q9P0N9 293 aa17.97■□□□□ 0.47
SNRNP35-204ENST00000527158 PCDHA2Q9Y5H9 948 aa17.97■□□□□ 0.47
SNRNP35-204ENST00000527158 RLFQ13129 1914 aa17.97■□□□□ 0.47
SNRNP35-204ENST00000527158 ITIH6Q6UXX5 1313 aa17.97■□□□□ 0.47
SNRNP35-204ENST00000527158 RBBP6Q7Z6E9 1792 aaKnown RBP17.97■□□□□ 0.47
SNRNP35-204ENST00000527158 AKR1B15C9JRZ8 316 aaPredicted RBP17.97■□□□□ 0.47
SNRNP35-204ENST00000527158 IRF6O14896 467 aa17.97■□□□□ 0.47
SNRNP35-204ENST00000527158 MB21D1Q8N884 522 aa17.97■□□□□ 0.47
SNRNP35-204ENST00000527158 REEP2Q9BRK0 252 aa17.97■□□□□ 0.47
SNRNP35-204ENST00000527158 TUBGCP2Q9BSJ2 902 aa17.97■□□□□ 0.47
SNRNP35-204ENST00000527158 TMX1Q9H3N1 280 aa17.97■□□□□ 0.47
SNRNP35-204ENST00000527158 TAF1DQ9H5J8 278 aaPredicted RBP17.97■□□□□ 0.47
SNRNP35-204ENST00000527158 CYP39A1Q9NYL5 469 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms