RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 FAM193AP78312 1265 aa19.43■□□□□ 0.7
USH1C-205ENST00000527020 IKQ13123 557 aaPredicted RBP19.43■□□□□ 0.7
USH1C-205ENST00000527020 WDR93Q6P2C0 686 aa19.43■□□□□ 0.7
USH1C-205ENST00000527020 CYP2W1Q8TAV3 490 aa19.43■□□□□ 0.7
USH1C-205ENST00000527020 VAV3Q9UKW4 847 aa19.43■□□□□ 0.7
USH1C-205ENST00000527020 RBBP6Q7Z6E9 1792 aaKnown RBP19.42■□□□□ 0.7
USH1C-205ENST00000527020 SPDYE3A6NKU9 549 aa19.42■□□□□ 0.7
USH1C-205ENST00000527020 H3BQF6 201 aa19.42■□□□□ 0.7
USH1C-205ENST00000527020 MSH4O15457 936 aa19.42■□□□□ 0.7
USH1C-205ENST00000527020 TLR2O60603 784 aa19.42■□□□□ 0.7
USH1C-205ENST00000527020 MAPK8IP2Q13387 824 aaPredicted RBP19.42■□□□□ 0.7
USH1C-205ENST00000527020 KIAA1755Q5JYT7 1200 aa19.42■□□□□ 0.7
USH1C-205ENST00000527020 ARHGAP27Q6ZUM4 889 aa19.42■□□□□ 0.7
USH1C-205ENST00000527020 SYT2Q8N9I0 419 aaPredicted RBP19.42■□□□□ 0.7
USH1C-205ENST00000527020 CSRNP1Q96S65 589 aa19.42■□□□□ 0.7
USH1C-205ENST00000527020 CEP72Q9P209 647 aa19.42■□□□□ 0.7
USH1C-205ENST00000527020 PRR12Q9ULL5 1215 aa19.42■□□□□ 0.7
USH1C-205ENST00000527020 AKR1B10O60218 316 aa19.42■□□□□ 0.7
USH1C-205ENST00000527020 ERLIN1O75477 346 aa19.42■□□□□ 0.7
USH1C-205ENST00000527020 GNA14O95837 355 aa19.42■□□□□ 0.7
USH1C-205ENST00000527020 HOXD13P35453 343 aa19.42■□□□□ 0.7
USH1C-205ENST00000527020 APBA1Q02410 837 aa19.42■□□□□ 0.7
USH1C-205ENST00000527020 PABPC4Q13310 644 aaKnown RBP eCLIP19.42■□□□□ 0.7
USH1C-205ENST00000527020 SPICE1Q8N0Z3 855 aa19.42■□□□□ 0.7
USH1C-205ENST00000527020 FAM20AQ96MK3 541 aa19.42■□□□□ 0.7
USH1C-205ENST00000527020 DEF6Q9H4E7 631 aa19.42■□□□□ 0.7
USH1C-205ENST00000527020 NLRC4Q9NPP4 1024 aa19.42■□□□□ 0.7
USH1C-205ENST00000527020 PJA2O43164 708 aa19.41■□□□□ 0.7
USH1C-205ENST00000527020 USO1O60763 962 aaKnown RBP19.41■□□□□ 0.7
USH1C-205ENST00000527020 MOCS3O95396 460 aa19.41■□□□□ 0.7
USH1C-205ENST00000527020 ECE1P42892 770 aa19.41■□□□□ 0.7
USH1C-205ENST00000527020 FAM83BQ5T0W9 1011 aa19.41■□□□□ 0.7
USH1C-205ENST00000527020 CC2D2BQ6DHV5 1058 aa19.41■□□□□ 0.7
USH1C-205ENST00000527020 EPM2AIP1Q7L775 607 aaPredicted RBP19.41■□□□□ 0.7
USH1C-205ENST00000527020 HDXQ7Z353 690 aa19.41■□□□□ 0.7
USH1C-205ENST00000527020 CACNA2D4Q7Z3S7 1137 aa19.41■□□□□ 0.7
USH1C-205ENST00000527020 TRIM58Q8NG06 486 aa19.41■□□□□ 0.7
USH1C-205ENST00000527020 CNKSR1Q969H4 720 aa19.41■□□□□ 0.7
USH1C-205ENST00000527020 REEP2Q9BRK0 252 aa19.41■□□□□ 0.7
USH1C-205ENST00000527020 LSM14BQ9BX40 385 aaKnown RBP19.41■□□□□ 0.7
USH1C-205ENST00000527020 SALL4Q9UJQ4 1053 aa19.41■□□□□ 0.7
USH1C-205ENST00000527020 KIF13BQ9NQT8 1826 aa19.41■□□□□ 0.7
USH1C-205ENST00000527020 SSU72P8A0A1W2PR75 194 aa19.4■□□□□ 0.7
USH1C-205ENST00000527020 KRT18P05783 430 aaKnown RBP19.4■□□□□ 0.7
USH1C-205ENST00000527020 TUBBP07437 444 aa19.4■□□□□ 0.7
USH1C-205ENST00000527020 CYP3A4P08684 503 aa19.4■□□□□ 0.7
USH1C-205ENST00000527020 GFPT1Q06210 699 aaPredicted RBP19.4■□□□□ 0.7
USH1C-205ENST00000527020 EDRF1Q3B7T1 1238 aa19.4■□□□□ 0.7
USH1C-205ENST00000527020 ERMNQ8TAM6 284 aa19.4■□□□□ 0.7
USH1C-205ENST00000527020 CRACR2AQ9BSW2 395 aa19.4■□□□□ 0.7
USH1C-205ENST00000527020 RNF216Q9NWF9 866 aaPredicted RBP19.4■□□□□ 0.7
USH1C-205ENST00000527020 SNX12Q9UMY4 172 aa19.4■□□□□ 0.7
USH1C-205ENST00000527020 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.4■□□□□ 0.7
USH1C-205ENST00000527020 PIK3CDO00329 1044 aa19.4■□□□□ 0.7
USH1C-205ENST00000527020 CKAP4Q07065 602 aaKnown RBP19.4■□□□□ 0.7
USH1C-205ENST00000527020 ADAM9Q13443 819 aa19.4■□□□□ 0.7
USH1C-205ENST00000527020 SFR1Q86XK3 245 aa19.4■□□□□ 0.7
USH1C-205ENST00000527020 MSL3Q8N5Y2 521 aaKnown RBP19.4■□□□□ 0.7
USH1C-205ENST00000527020 ZHX3Q9H4I2 956 aa19.4■□□□□ 0.7
USH1C-205ENST00000527020 DNM3Q9UQ16 869 aa19.4■□□□□ 0.7
USH1C-205ENST00000527020 JRKLQ9Y4A0 524 aa19.4■□□□□ 0.7
USH1C-205ENST00000527020 IGLV3-22A0A075B6J6 115 aa19.39■□□□□ 0.69
USH1C-205ENST00000527020 RBAK-RBAKDNI3L0D1 243 aa19.39■□□□□ 0.69
USH1C-205ENST00000527020 EML1O00423 815 aa19.39■□□□□ 0.69
USH1C-205ENST00000527020 TACC1O75410 805 aa19.39■□□□□ 0.69
USH1C-205ENST00000527020 MAGEA1P43355 309 aa19.39■□□□□ 0.69
USH1C-205ENST00000527020 PPP4R3CPQ6ZMV5 832 aa19.39■□□□□ 0.69
USH1C-205ENST00000527020 CREG2Q8IUH2 290 aa19.39■□□□□ 0.69
USH1C-205ENST00000527020 SYN2Q92777 582 aaPredicted RBP19.39■□□□□ 0.69
USH1C-205ENST00000527020 RPGRIP1Q96KN7 1286 aa19.39■□□□□ 0.69
USH1C-205ENST00000527020 SYNPO2Q9UMS6 1093 aa19.39■□□□□ 0.69
USH1C-205ENST00000527020 POLR2FP61218 127 aaKnown RBP19.39■□□□□ 0.69
USH1C-205ENST00000527020 CYP4A11Q02928 519 aa19.39■□□□□ 0.69
USH1C-205ENST00000527020 ACER1Q8TDN7 264 aa19.39■□□□□ 0.69
USH1C-205ENST00000527020 BCAS3Q9H6U6 928 aa19.39■□□□□ 0.69
USH1C-205ENST00000527020 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.39■□□□□ 0.69
USH1C-205ENST00000527020 JADE2Q9NQC1 790 aa19.39■□□□□ 0.69
USH1C-205ENST00000527020 FAM184BQ9ULE4 1060 aa19.39■□□□□ 0.69
USH1C-205ENST00000527020 TRAF3IP3Q9Y228 551 aa19.39■□□□□ 0.69
USH1C-205ENST00000527020 CYP2C19P33261 490 aa19.38■□□□□ 0.69
USH1C-205ENST00000527020 DPY19L2P1Q6NXN4 242 aa19.38■□□□□ 0.69
USH1C-205ENST00000527020 GBP3Q9H0R5 595 aa19.38■□□□□ 0.69
USH1C-205ENST00000527020 GANQ9H2C0 597 aa19.38■□□□□ 0.69
USH1C-205ENST00000527020 PDE11AQ9HCR9 933 aa19.38■□□□□ 0.69
USH1C-205ENST00000527020 RGPD3A6NKT7 1758 aaPredicted RBP19.38■□□□□ 0.69
USH1C-205ENST00000527020 RGPD4Q7Z3J3 1758 aa19.38■□□□□ 0.69
USH1C-205ENST00000527020 RSPH10B2B2RC85 870 aa19.37■□□□□ 0.69
USH1C-205ENST00000527020 TCP10L2B9ZVM9 353 aa19.37■□□□□ 0.69
USH1C-205ENST00000527020 PPIP5K2O43314 1243 aa19.37■□□□□ 0.69
USH1C-205ENST00000527020 RSPH10BP0C881 870 aa19.37■□□□□ 0.69
USH1C-205ENST00000527020 MYBP10242 640 aa19.37■□□□□ 0.69
USH1C-205ENST00000527020 NR2F2P24468 414 aa19.37■□□□□ 0.69
USH1C-205ENST00000527020 CASP8Q14790 479 aa19.37■□□□□ 0.69
USH1C-205ENST00000527020 SFMBT2Q5VUG0 894 aa19.37■□□□□ 0.69
USH1C-205ENST00000527020 COG1Q8WTW3 980 aa19.37■□□□□ 0.69
USH1C-205ENST00000527020 TBC1D5Q92609 795 aa19.37■□□□□ 0.69
USH1C-205ENST00000527020 POLR3CQ9BUI4 534 aaPredicted RBP19.37■□□□□ 0.69
USH1C-205ENST00000527020 RUSC1Q9BVN2 902 aa19.37■□□□□ 0.69
USH1C-205ENST00000527020 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.37■□□□□ 0.69
USH1C-205ENST00000527020 HERC5Q9UII4 1024 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms