RNA–Protein interactions for RNA: ENST00000527004.5

FOXRED1-207, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 5

Gene FOXRED1, Length 1,760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-207ENST00000527004 TRPM4Q8TD43 1214 aa17.58■□□□□ 0.41
FOXRED1-207ENST00000527004 DNAJC7Q99615 494 aa17.58■□□□□ 0.41
FOXRED1-207ENST00000527004 NPHP3-ACAD11A0A0J9YXS1 232 aa17.58■□□□□ 0.4
FOXRED1-207ENST00000527004 SOWAHDA6NJG2 315 aa17.58■□□□□ 0.4
FOXRED1-207ENST00000527004 IPO5O00410 1097 aaKnown RBP17.58■□□□□ 0.4
FOXRED1-207ENST00000527004 VWA5AO00534 786 aa17.58■□□□□ 0.4
FOXRED1-207ENST00000527004 CYP4A11Q02928 519 aa17.58■□□□□ 0.4
FOXRED1-207ENST00000527004 TRIM65Q6PJ69 517 aa17.58■□□□□ 0.4
FOXRED1-207ENST00000527004 GLIS3Q8NEA6 775 aa17.58■□□□□ 0.4
FOXRED1-207ENST00000527004 SYTL5Q8TDW5 730 aaPredicted RBP17.58■□□□□ 0.4
FOXRED1-207ENST00000527004 SCFD1Q8WVM8 642 aa17.58■□□□□ 0.4
FOXRED1-207ENST00000527004 ZKSCAN4Q969J2 545 aaPredicted RBP17.58■□□□□ 0.4
FOXRED1-207ENST00000527004 REEP2Q9BRK0 252 aa17.58■□□□□ 0.4
FOXRED1-207ENST00000527004 MAF1Q9H063 256 aa17.58■□□□□ 0.4
FOXRED1-207ENST00000527004 BHMT2Q9H2M3 363 aa17.58■□□□□ 0.4
FOXRED1-207ENST00000527004 GGA3Q9NZ52 723 aa17.58■□□□□ 0.4
FOXRED1-207ENST00000527004 RGL1Q9NZL6 768 aa17.58■□□□□ 0.4
FOXRED1-207ENST00000527004 KCND2Q9NZV8 630 aa17.58■□□□□ 0.4
FOXRED1-207ENST00000527004 COL20A1Q9P218 1284 aa17.58■□□□□ 0.4
FOXRED1-207ENST00000527004 UBIAD1Q9Y5Z9 338 aa17.58■□□□□ 0.4
FOXRED1-207ENST00000527004 ADGRG1Q9Y653 693 aa17.58■□□□□ 0.4
FOXRED1-207ENST00000527004 A0A1W2PQJ5 194 aa17.57■□□□□ 0.4
FOXRED1-207ENST00000527004 TTC26A0AVF1 554 aa17.57■□□□□ 0.4
FOXRED1-207ENST00000527004 ITGB5P18084 799 aa17.57■□□□□ 0.4
FOXRED1-207ENST00000527004 EDRF1Q3B7T1 1238 aa17.57■□□□□ 0.4
FOXRED1-207ENST00000527004 RAD9BQ6WBX8 426 aa17.57■□□□□ 0.4
FOXRED1-207ENST00000527004 ZC3H3Q8IXZ2 948 aaKnown RBP17.57■□□□□ 0.4
FOXRED1-207ENST00000527004 NACC1Q96RE7 527 aa17.57■□□□□ 0.4
FOXRED1-207ENST00000527004 TTYH3Q9C0H2 523 aa17.57■□□□□ 0.4
FOXRED1-207ENST00000527004 KCTD10Q9H3F6 313 aa17.57■□□□□ 0.4
FOXRED1-207ENST00000527004 NDST4Q9H3R1 872 aa17.57■□□□□ 0.4
FOXRED1-207ENST00000527004 ADAMTS5Q9UNA0 930 aa17.57■□□□□ 0.4
FOXRED1-207ENST00000527004 COL4A3BPQ9Y5P4 624 aa17.57■□□□□ 0.4
FOXRED1-207ENST00000527004 DOCK1Q14185 1865 aa17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 RNF225M0QZC1 329 aaPredicted RBP17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 GAP43P17677 238 aa17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 MARSP56192 900 aaKnown RBP17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 DGKZQ13574 1117 aa17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 SYCP1Q15431 976 aa17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 TSR1Q2NL82 804 aaKnown RBP17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 RINT1Q6NUQ1 792 aa17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 SYT10Q6XYQ8 523 aa17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 TPH2Q8IWU9 490 aa17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 EEF2KMTQ96G04 330 aa17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 DYDC2Q96IM9 177 aa17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 SPON1Q9HCB6 807 aa17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 JADE2Q9NQC1 790 aa17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 ZHX2Q9Y6X8 837 aa17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 TRAF5O00463 557 aa17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 HIRAP54198 1017 aaPredicted RBP17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 CTTNQ14247 550 aaKnown RBP17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 BMT2Q1RMZ1 405 aa17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 MUM1L1Q5H9M0 696 aa17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 XRRA1Q6P2D8 792 aa17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 EPM2AIP1Q7L775 607 aaPredicted RBP17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 TRERF1Q96PN7 1200 aa17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 UNC45AQ9H3U1 944 aa17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 L2HGDHQ9H9P8 463 aa17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 OLFML3Q9NRN5 406 aa17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 KCNH7Q9NS40 1196 aa17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 TBC1D7Q9P0N9 293 aa17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 TRAF3IP3Q9Y228 551 aa17.56■□□□□ 0.4
FOXRED1-207ENST00000527004 TBCAO75347 108 aaKnown RBP17.55■□□□□ 0.4
FOXRED1-207ENST00000527004 TRIM21P19474 475 aaKnown RBP17.55■□□□□ 0.4
FOXRED1-207ENST00000527004 DSG3P32926 999 aa17.55■□□□□ 0.4
FOXRED1-207ENST00000527004 EPS15P42566 896 aa17.55■□□□□ 0.4
FOXRED1-207ENST00000527004 RPS6P62753 249 aaKnown RBP17.55■□□□□ 0.4
FOXRED1-207ENST00000527004 ZBED6P86452 979 aa17.55■□□□□ 0.4
FOXRED1-207ENST00000527004 CACNB1Q02641 598 aaPredicted RBP17.55■□□□□ 0.4
FOXRED1-207ENST00000527004 COG2Q14746 738 aa17.55■□□□□ 0.4
FOXRED1-207ENST00000527004 MTF1Q14872 753 aa17.55■□□□□ 0.4
FOXRED1-207ENST00000527004 RNF207Q6ZRF8 634 aa17.55■□□□□ 0.4
FOXRED1-207ENST00000527004 C1orf186Q6ZWK4 172 aa17.55■□□□□ 0.4
FOXRED1-207ENST00000527004 ZHX3Q9H4I2 956 aa17.55■□□□□ 0.4
FOXRED1-207ENST00000527004 ATP2A1O14983 1001 aa17.54■□□□□ 0.4
FOXRED1-207ENST00000527004 CHMP2AO43633 222 aa17.54■□□□□ 0.4
FOXRED1-207ENST00000527004 ERVK-24P63145 666 aa17.54■□□□□ 0.4
FOXRED1-207ENST00000527004 RAD51AP2Q09MP3 1159 aa17.54■□□□□ 0.4
FOXRED1-207ENST00000527004 KNOP1Q1ED39 458 aaKnown RBP17.54■□□□□ 0.4
FOXRED1-207ENST00000527004 TKFCQ3LXA3 575 aa17.54■□□□□ 0.4
FOXRED1-207ENST00000527004 PRAMEF18Q5VWM3 479 aa17.54■□□□□ 0.4
FOXRED1-207ENST00000527004 SFR1Q86XK3 245 aa17.54■□□□□ 0.4
FOXRED1-207ENST00000527004 ZNF397Q8NF99 534 aaPredicted RBP17.54■□□□□ 0.4
FOXRED1-207ENST00000527004 REPS2Q8NFH8 660 aa17.54■□□□□ 0.4
FOXRED1-207ENST00000527004 ATG4CQ96DT6 458 aa17.54■□□□□ 0.4
FOXRED1-207ENST00000527004 RUSC1Q9BVN2 902 aa17.54■□□□□ 0.4
FOXRED1-207ENST00000527004 FGFBP2Q9BYJ0 223 aa17.54■□□□□ 0.4
FOXRED1-207ENST00000527004 TBC1D22BQ9NU19 505 aa17.54■□□□□ 0.4
FOXRED1-207ENST00000527004 DNAI1Q9UI46 699 aa17.54■□□□□ 0.4
FOXRED1-207ENST00000527004 MYPNQ86TC9 1320 aa17.54■□□□□ 0.4
FOXRED1-207ENST00000527004 SMCHD1A6NHR9 2005 aa17.53■□□□□ 0.4
FOXRED1-207ENST00000527004 RASSF10A6NK89 507 aa17.53■□□□□ 0.4
FOXRED1-207ENST00000527004 PDXKO00764 312 aa17.53■□□□□ 0.4
FOXRED1-207ENST00000527004 MRPS9P82933 396 aaKnown RBP17.53■□□□□ 0.4
FOXRED1-207ENST00000527004 CDK17Q00537 523 aa17.53■□□□□ 0.4
FOXRED1-207ENST00000527004 MEA1Q16626 185 aa17.53■□□□□ 0.4
FOXRED1-207ENST00000527004 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.53■□□□□ 0.41e-7■■□□□ 11.5
FOXRED1-207ENST00000527004 TAAR1Q96RJ0 339 aa17.53■□□□□ 0.4
FOXRED1-207ENST00000527004 DESI2Q9BSY9 194 aa17.53■□□□□ 0.4
FOXRED1-207ENST00000527004 EDEM3Q9BZQ6 932 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms