RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 KCNG4Q8TDN1 519 aa18.62■□□□□ 0.57
CAPN1-205ENST00000526954 AFG1LQ8WV93 481 aa18.62■□□□□ 0.57
CAPN1-205ENST00000526954 SEPT1Q8WYJ6 367 aa18.62■□□□□ 0.57
CAPN1-205ENST00000526954 TCEAL9Q9UHQ7 104 aa18.62■□□□□ 0.57
CAPN1-205ENST00000526954 FBXO2Q9UK22 296 aaPredicted RBP18.62■□□□□ 0.57
CAPN1-205ENST00000526954 SRPRBQ9Y5M8 271 aaKnown RBP18.62■□□□□ 0.57
CAPN1-205ENST00000526954 ELP1O95163 1332 aa18.62■□□□□ 0.57
CAPN1-205ENST00000526954 GSTTP1A0A1W2PQM5 241 aa18.61■□□□□ 0.57
CAPN1-205ENST00000526954 WDR64B1ANS9 1081 aa18.61■□□□□ 0.57
CAPN1-205ENST00000526954 NOP56O00567 594 aaKnown RBP18.61■□□□□ 0.57
CAPN1-205ENST00000526954 SORBS3O60504 671 aa18.61■□□□□ 0.57
CAPN1-205ENST00000526954 PPFIA4O75335 1185 aa18.61■□□□□ 0.57
CAPN1-205ENST00000526954 MYCP01106 439 aaPredicted RBP18.61■□□□□ 0.57
CAPN1-205ENST00000526954 CAPN2P17655 700 aa18.61■□□□□ 0.57
CAPN1-205ENST00000526954 NCLP19338 710 aaKnown RBP18.61■□□□□ 0.57
CAPN1-205ENST00000526954 CPT1AP50416 773 aa18.61■□□□□ 0.57
CAPN1-205ENST00000526954 JAK3P52333 1124 aa18.61■□□□□ 0.57
CAPN1-205ENST00000526954 FSCN1Q16658 493 aaKnown RBP18.61■□□□□ 0.57
CAPN1-205ENST00000526954 BRDTQ58F21 947 aaPredicted RBP18.61■□□□□ 0.57
CAPN1-205ENST00000526954 ABHD15Q6UXT9 468 aa18.61■□□□□ 0.57
CAPN1-205ENST00000526954 LEO1Q8WVC0 666 aaPredicted RBP18.61■□□□□ 0.57
CAPN1-205ENST00000526954 SPATA32Q96LK8 384 aa18.61■□□□□ 0.57
CAPN1-205ENST00000526954 DEFB118Q96PH6 123 aa18.61■□□□□ 0.57
CAPN1-205ENST00000526954 RAB34Q9BZG1 259 aa18.61■□□□□ 0.57
CAPN1-205ENST00000526954 CRISPLD2Q9H0B8 497 aa18.61■□□□□ 0.57
CAPN1-205ENST00000526954 DISC1Q9NRI5 854 aa18.61■□□□□ 0.57
CAPN1-205ENST00000526954 OGDHLQ9ULD0 1010 aa18.61■□□□□ 0.57
CAPN1-205ENST00000526954 TELO2Q9Y4R8 837 aa18.61■□□□□ 0.57
CAPN1-205ENST00000526954 MYH9P35579 1960 aaKnown RBP18.61■□□□□ 0.57
CAPN1-205ENST00000526954 IGKV6D-21A0A0A0MT36 114 aa18.6■□□□□ 0.57
CAPN1-205ENST00000526954 VWA3AA6NCI4 1184 aa18.6■□□□□ 0.57
CAPN1-205ENST00000526954 EML1O00423 815 aa18.6■□□□□ 0.57
CAPN1-205ENST00000526954 PGK1P00558 417 aa18.6■□□□□ 0.57
CAPN1-205ENST00000526954 MMP3P08254 477 aa18.6■□□□□ 0.57
CAPN1-205ENST00000526954 C6orf222P0C671 652 aaPredicted RBP18.6■□□□□ 0.57
CAPN1-205ENST00000526954 MARCKSP29966 332 aaPredicted RBP18.6■□□□□ 0.57
CAPN1-205ENST00000526954 COL13A1Q5TAT6 717 aaPredicted RBP18.6■□□□□ 0.57
CAPN1-205ENST00000526954 CCSAPQ6IQ19 270 aaPredicted RBP18.6■□□□□ 0.57
CAPN1-205ENST00000526954 MIS18BP1Q6P0N0 1132 aa18.6■□□□□ 0.57
CAPN1-205ENST00000526954 MIER3Q7Z3K6 550 aa18.6■□□□□ 0.57
CAPN1-205ENST00000526954 KRI1Q8N9T8 703 aaKnown RBP18.6■□□□□ 0.57
CAPN1-205ENST00000526954 ARRDC4Q8NCT1 418 aa18.6■□□□□ 0.57
CAPN1-205ENST00000526954 AK8Q96MA6 479 aa18.6■□□□□ 0.57
CAPN1-205ENST00000526954 PCDHA10Q9Y5I2 948 aa18.6■□□□□ 0.57
CAPN1-205ENST00000526954 MYADML2A6NDP7 307 aa18.59■□□□□ 0.57
CAPN1-205ENST00000526954 CHMP2AO43633 222 aa18.59■□□□□ 0.57
CAPN1-205ENST00000526954 KPNA6O60684 536 aa18.59■□□□□ 0.57
CAPN1-205ENST00000526954 SGPL1O95470 568 aa18.59■□□□□ 0.57
CAPN1-205ENST00000526954 SUPT20HL2P0C7V6 817 aa18.59■□□□□ 0.57
CAPN1-205ENST00000526954 TCF7P36402 384 aaPredicted RBP18.59■□□□□ 0.57
CAPN1-205ENST00000526954 LONP1P36776 959 aaKnown RBP18.59■□□□□ 0.57
CAPN1-205ENST00000526954 SP4Q02446 784 aa18.59■□□□□ 0.57
CAPN1-205ENST00000526954 LRRC41Q15345 812 aa18.59■□□□□ 0.57
CAPN1-205ENST00000526954 EPHA7Q15375 998 aa18.59■□□□□ 0.57
CAPN1-205ENST00000526954 DGKDQ16760 1214 aa18.59■□□□□ 0.57
CAPN1-205ENST00000526954 RNF180Q86T96 592 aa18.59■□□□□ 0.57
CAPN1-205ENST00000526954 LRWD1Q9UFC0 647 aa18.59■□□□□ 0.57
CAPN1-205ENST00000526954 STK24Q9Y6E0 443 aa18.59■□□□□ 0.57
CAPN1-205ENST00000526954 POTEMA6NI47 508 aa18.58■□□□□ 0.56
CAPN1-205ENST00000526954 ZEB2O60315 1214 aa18.58■□□□□ 0.56
CAPN1-205ENST00000526954 LGR5O75473 907 aa18.58■□□□□ 0.56
CAPN1-205ENST00000526954 PSAPP07602 524 aa18.58■□□□□ 0.56
CAPN1-205ENST00000526954 GJA8P48165 433 aa18.58■□□□□ 0.56
CAPN1-205ENST00000526954 IRX5P78411 483 aaPredicted RBP18.58■□□□□ 0.56
CAPN1-205ENST00000526954 BEX3Q00994 111 aa18.58■□□□□ 0.56
CAPN1-205ENST00000526954 GRIN1Q05586 938 aa18.58■□□□□ 0.56
CAPN1-205ENST00000526954 GNASQ5JWF2 1037 aa18.58■□□□□ 0.56
CAPN1-205ENST00000526954 NCAPH2Q6IBW4 605 aa18.58■□□□□ 0.56
CAPN1-205ENST00000526954 ZNF579Q8NAF0 562 aaKnown RBP18.58■□□□□ 0.56
CAPN1-205ENST00000526954 PCSK9Q8NBP7 692 aaKnown RBP18.58■□□□□ 0.56
CAPN1-205ENST00000526954 U2AF1L4Q8WU68 220 aaKnown RBP18.58■□□□□ 0.56
CAPN1-205ENST00000526954 TSEN34Q9BSV6 310 aaKnown RBP18.58■□□□□ 0.56
CAPN1-205ENST00000526954 TMEM106CQ9BVX2 250 aa18.58■□□□□ 0.56
CAPN1-205ENST00000526954 PCDHA7Q9UN72 937 aa18.58■□□□□ 0.56
CAPN1-205ENST00000526954 SAMM50Q9Y512 469 aa18.58■□□□□ 0.56
CAPN1-205ENST00000526954 EMSYQ7Z589 1322 aa18.57■□□□□ 0.56
CAPN1-205ENST00000526954 CUTAO60888 179 aa18.57■□□□□ 0.56
CAPN1-205ENST00000526954 AXDND1Q5T1B0 1012 aaPredicted RBP18.57■□□□□ 0.56
CAPN1-205ENST00000526954 PLPPR4Q7Z2D5 763 aa18.57■□□□□ 0.56
CAPN1-205ENST00000526954 ERMNQ8TAM6 284 aa18.57■□□□□ 0.56
CAPN1-205ENST00000526954 NEK9Q8TD19 979 aa18.57■□□□□ 0.56
CAPN1-205ENST00000526954 AFAP1L1Q8TED9 768 aa18.57■□□□□ 0.56
CAPN1-205ENST00000526954 CLIC6Q96NY7 704 aa18.57■□□□□ 0.56
CAPN1-205ENST00000526954 PCYT2Q99447 389 aa18.57■□□□□ 0.56
CAPN1-205ENST00000526954 HSD17B14Q9BPX1 270 aa18.57■□□□□ 0.56
CAPN1-205ENST00000526954 CSRNP2Q9H175 543 aa18.57■□□□□ 0.56
CAPN1-205ENST00000526954 DNM1LO00429 736 aa18.56■□□□□ 0.56
CAPN1-205ENST00000526954 LGALS2P05162 132 aa18.56■□□□□ 0.56
CAPN1-205ENST00000526954 P4HBP07237 508 aaKnown RBP18.56■□□□□ 0.56
CAPN1-205ENST00000526954 ME1P48163 572 aa18.56■□□□□ 0.56
CAPN1-205ENST00000526954 KCNA10Q16322 511 aa18.56■□□□□ 0.56
CAPN1-205ENST00000526954 CSPP1Q1MSJ5 1256 aa18.56■□□□□ 0.56
CAPN1-205ENST00000526954 CCDC60Q8IWA6 550 aaPredicted RBP18.56■□□□□ 0.56
CAPN1-205ENST00000526954 EIF2AK1Q9BQI3 630 aaKnown RBP18.56■□□□□ 0.56
CAPN1-205ENST00000526954 C16orf70Q9BSU1 422 aa18.56■□□□□ 0.56
CAPN1-205ENST00000526954 POLR3CQ9BUI4 534 aaPredicted RBP18.56■□□□□ 0.56
CAPN1-205ENST00000526954 SMARCAD1Q9H4L7 1026 aa18.56■□□□□ 0.56
CAPN1-205ENST00000526954 GDPD2Q9HCC8 539 aa18.56■□□□□ 0.56
CAPN1-205ENST00000526954 MAFBQ9Y5Q3 323 aaPredicted RBP18.56■□□□□ 0.56
CAPN1-205ENST00000526954 SCN10AQ9Y5Y9 1956 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms