RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 LINC01599Q8WXQ3 324 aa15.89■□□□□ 0.13
SSRP1-203ENST00000526696 SUPT16HQ9Y5B9 1047 aaKnown RBP15.89■□□□□ 0.13
SSRP1-203ENST00000526696 MRVI1Q9Y6F6 885 aa15.89■□□□□ 0.13
SSRP1-203ENST00000526696 C2CD4DB7Z1M9 353 aa15.88■□□□□ 0.13
SSRP1-203ENST00000526696 LMNAP02545 664 aaKnown RBP15.88■□□□□ 0.13
SSRP1-203ENST00000526696 GHRP10912 638 aa15.88■□□□□ 0.13
SSRP1-203ENST00000526696 NPR3P17342 541 aa15.88■□□□□ 0.13
SSRP1-203ENST00000526696 DUSP6Q16828 381 aa15.88■□□□□ 0.13
SSRP1-203ENST00000526696 USH1GQ495M9 461 aa15.88■□□□□ 0.13
SSRP1-203ENST00000526696 NSUN6Q8TEA1 469 aaKnown RBP15.88■□□□□ 0.13
SSRP1-203ENST00000526696 NEK1Q96PY6 1258 aa15.88■□□□□ 0.13
SSRP1-203ENST00000526696 EHMT1Q9H9B1 1298 aa15.88■□□□□ 0.13
SSRP1-203ENST00000526696 CACNA1IQ9P0X4 2223 aa15.87■□□□□ 0.13
SSRP1-203ENST00000526696 TSPY2A6NKD2 308 aa15.87■□□□□ 0.13
SSRP1-203ENST00000526696 PPFIA3O75145 1194 aa15.87■□□□□ 0.13
SSRP1-203ENST00000526696 ASGR2P07307 311 aa15.87■□□□□ 0.13
SSRP1-203ENST00000526696 GNAT2P19087 354 aa15.87■□□□□ 0.13
SSRP1-203ENST00000526696 ADAM17P78536 824 aa15.87■□□□□ 0.13
SSRP1-203ENST00000526696 LPIN1Q14693 890 aa15.87■□□□□ 0.13
SSRP1-203ENST00000526696 PAN2Q504Q3 1202 aaKnown RBP15.87■□□□□ 0.13
SSRP1-203ENST00000526696 PPP4R3BQ5MIZ7 849 aa15.87■□□□□ 0.13
SSRP1-203ENST00000526696 CELF3Q5SZQ8 465 aaKnown RBP15.87■□□□□ 0.13
SSRP1-203ENST00000526696 ANKRD54Q6NXT1 300 aa15.87■□□□□ 0.13
SSRP1-203ENST00000526696 TMEM184AQ6ZMB5 413 aa15.87■□□□□ 0.13
SSRP1-203ENST00000526696 CCDC105Q8IYK2 499 aa15.87■□□□□ 0.13
SSRP1-203ENST00000526696 CMTR2Q8IYT2 770 aaKnown RBP15.87■□□□□ 0.13
SSRP1-203ENST00000526696 KCNG4Q8TDN1 519 aa15.87■□□□□ 0.13
SSRP1-203ENST00000526696 SPATA33Q96N06 139 aa15.87■□□□□ 0.13
SSRP1-203ENST00000526696 IWS1Q96ST2 819 aa15.87■□□□□ 0.13
SSRP1-203ENST00000526696 RMDN3Q96TC7 470 aa15.87■□□□□ 0.13
SSRP1-203ENST00000526696 BCAS3Q9H6U6 928 aa15.87■□□□□ 0.13
SSRP1-203ENST00000526696 TSHZ2Q9NRE2 1034 aa15.87■□□□□ 0.13
SSRP1-203ENST00000526696 SETD4Q9NVD3 440 aa15.87■□□□□ 0.13
SSRP1-203ENST00000526696 H3BRB1 525 aa15.86■□□□□ 0.13
SSRP1-203ENST00000526696 EIF3JO75822 258 aaKnown RBP15.86■□□□□ 0.13
SSRP1-203ENST00000526696 EIF2AK2P19525 551 aaKnown RBP15.86■□□□□ 0.13
SSRP1-203ENST00000526696 GATMP50440 423 aa15.86■□□□□ 0.13
SSRP1-203ENST00000526696 ERVFC1P60507 584 aa15.86■□□□□ 0.13
SSRP1-203ENST00000526696 SP2Q02086 613 aa15.86■□□□□ 0.13
SSRP1-203ENST00000526696 CTDSPL2Q05D32 466 aa15.86■□□□□ 0.13
SSRP1-203ENST00000526696 RTN4RL1Q86UN2 441 aaPredicted RBP15.86■□□□□ 0.13
SSRP1-203ENST00000526696 SIRT2Q8IXJ6 389 aa15.86■□□□□ 0.13
SSRP1-203ENST00000526696 DCLK2Q8N568 766 aa15.86■□□□□ 0.13
SSRP1-203ENST00000526696 FLCNQ8NFG4 579 aa15.86■□□□□ 0.13
SSRP1-203ENST00000526696 TMEM47Q9BQJ4 181 aa15.86■□□□□ 0.13
SSRP1-203ENST00000526696 TUT1Q9H6E5 874 aaKnown RBP15.86■□□□□ 0.13
SSRP1-203ENST00000526696 RALYQ9UKM9 306 aaKnown RBP15.86■□□□□ 0.13
SSRP1-203ENST00000526696 ANKRD11Q6UB99 2663 aaPredicted RBP15.86■□□□□ 0.13
SSRP1-203ENST00000526696 DOCK5Q9H7D0 1870 aa15.85■□□□□ 0.13
SSRP1-203ENST00000526696 FOXP2O15409 715 aa15.85■□□□□ 0.13
SSRP1-203ENST00000526696 RNF113AO15541 343 aaKnown RBP15.85■□□□□ 0.13
SSRP1-203ENST00000526696 GGPS1O95749 300 aa15.85■□□□□ 0.13
SSRP1-203ENST00000526696 LGALS2P05162 132 aa15.85■□□□□ 0.13
SSRP1-203ENST00000526696 NR3C2P08235 984 aa15.85■□□□□ 0.13
SSRP1-203ENST00000526696 PDHBP11177 359 aa15.85■□□□□ 0.13
SSRP1-203ENST00000526696 AOC1P19801 751 aa15.85■□□□□ 0.13
SSRP1-203ENST00000526696 TECP42680 631 aa15.85■□□□□ 0.13
SSRP1-203ENST00000526696 MGAT3Q09327 533 aa15.85■□□□□ 0.13
SSRP1-203ENST00000526696 ST3GAL2Q16842 350 aa15.85■□□□□ 0.13
SSRP1-203ENST00000526696 RSPO4Q2I0M5 234 aaPredicted RBP15.85■□□□□ 0.13
SSRP1-203ENST00000526696 KBTBD3Q8NAB2 608 aa15.85■□□□□ 0.13
SSRP1-203ENST00000526696 GPKOWQ92917 476 aaPredicted RBP eCLIP15.85■□□□□ 0.13
SSRP1-203ENST00000526696 SEC62Q99442 399 aaKnown RBP15.85■□□□□ 0.13
SSRP1-203ENST00000526696 CPVLQ9H3G5 476 aa15.85■□□□□ 0.13
SSRP1-203ENST00000526696 MFSD1Q9H3U5 465 aa15.85■□□□□ 0.13
SSRP1-203ENST00000526696 POMKQ9H5K3 350 aa15.85■□□□□ 0.13
SSRP1-203ENST00000526696 PNMA2Q9UL42 364 aa15.85■□□□□ 0.13
SSRP1-203ENST00000526696 R4GN57 208 aa15.85■□□□□ 0.13
SSRP1-203ENST00000526696 LOXHD1Q8IVV2 1947 aa15.85■□□□□ 0.13
SSRP1-203ENST00000526696 MYH6P13533 1939 aa15.84■□□□□ 0.13
SSRP1-203ENST00000526696 ZNF316A6NFI3 1004 aaPredicted RBP15.84■□□□□ 0.13
SSRP1-203ENST00000526696 FSCN2O14926 492 aa15.84■□□□□ 0.13
SSRP1-203ENST00000526696 SLC3A2P08195 630 aaKnown RBP15.84■□□□□ 0.13
SSRP1-203ENST00000526696 ZNF543Q08ER8 600 aa15.84■□□□□ 0.13
SSRP1-203ENST00000526696 FTSJ3Q8IY81 847 aaKnown RBP15.84■□□□□ 0.13
SSRP1-203ENST00000526696 DTWD2Q8NBA8 298 aa15.84■□□□□ 0.13
SSRP1-203ENST00000526696 MICAL1Q8TDZ2 1067 aa15.84■□□□□ 0.13
SSRP1-203ENST00000526696 CDCA3Q99618 268 aaPredicted RBP15.84■□□□□ 0.13
SSRP1-203ENST00000526696 PXMP2Q9NR77 195 aa15.84■□□□□ 0.13
SSRP1-203ENST00000526696 NR2E1Q9Y466 385 aa15.84■□□□□ 0.13
SSRP1-203ENST00000526696 ZFYVE26Q68DK2 2539 aa15.84■□□□□ 0.13
SSRP1-203ENST00000526696 FNDC1Q4ZHG4 1894 aaPredicted RBP15.83■□□□□ 0.12
SSRP1-203ENST00000526696 RANBP6O60518 1105 aaKnown RBP15.83■□□□□ 0.12
SSRP1-203ENST00000526696 UBA1P22314 1058 aaKnown RBP15.83■□□□□ 0.12
SSRP1-203ENST00000526696 ARHGEF16Q5VV41 709 aa15.83■□□□□ 0.12
SSRP1-203ENST00000526696 RUFY4Q6ZNE9 571 aa15.83■□□□□ 0.12
SSRP1-203ENST00000526696 CYP2W1Q8TAV3 490 aa15.83■□□□□ 0.12
SSRP1-203ENST00000526696 NAPBQ9H115 298 aa15.83■□□□□ 0.12
SSRP1-203ENST00000526696 AGO3Q9H9G7 860 aaKnown RBP15.83■□□□□ 0.12
SSRP1-203ENST00000526696 TELO2Q9Y4R8 837 aa15.83■□□□□ 0.12
SSRP1-203ENST00000526696 TOP1P11387 765 aaKnown RBP15.82■□□□□ 0.12
SSRP1-203ENST00000526696 COL9A2Q14055 689 aaPredicted RBP15.82■□□□□ 0.12
SSRP1-203ENST00000526696 FBXO47Q5MNV8 452 aa15.82■□□□□ 0.12
SSRP1-203ENST00000526696 LLGL2Q6P1M3 1020 aa15.82■□□□□ 0.12
SSRP1-203ENST00000526696 LMBR1Q8WVP7 490 aa15.82■□□□□ 0.12
SSRP1-203ENST00000526696 SEMA4AQ9H3S1 761 aa15.82■□□□□ 0.12
SSRP1-203ENST00000526696 LIMD1Q9UGP4 676 aa15.82■□□□□ 0.12
SSRP1-203ENST00000526696 RAB11FIP3O75154 756 aa15.81■□□□□ 0.12
SSRP1-203ENST00000526696 SNHG28P0DPA3 235 aa15.81■□□□□ 0.12
SSRP1-203ENST00000526696 TRIM50Q86XT4 487 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms