RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 DIO2Q92813 273 aa6.16□□□□□ -1.42
CSDE1-211ENST00000525970 SPATA25Q9BR10 227 aa6.16□□□□□ -1.42
CSDE1-211ENST00000525970 TNPO3Q9Y5L0 923 aaKnown RBP6.16□□□□□ -1.42
CSDE1-211ENST00000525970 K7ESM1 405 aa6.15□□□□□ -1.42
CSDE1-211ENST00000525970 MCL1Q07820 350 aa6.15□□□□□ -1.42
CSDE1-211ENST00000525970 ZNF460Q14592 562 aa6.15□□□□□ -1.42
CSDE1-211ENST00000525970 SLC9A5Q14940 896 aa6.15□□□□□ -1.42
CSDE1-211ENST00000525970 INF2Q27J81 1249 aa6.15□□□□□ -1.42
CSDE1-211ENST00000525970 SLC35F1Q5T1Q4 408 aa6.15□□□□□ -1.42
CSDE1-211ENST00000525970 E4F1Q66K89 784 aaPredicted RBP6.15□□□□□ -1.42
CSDE1-211ENST00000525970 MBLAC2Q68D91 279 aa6.15□□□□□ -1.42
CSDE1-211ENST00000525970 WWC2Q6AWC2 1192 aa6.15□□□□□ -1.42
CSDE1-211ENST00000525970 PKN3Q6P5Z2 889 aa6.15□□□□□ -1.42
CSDE1-211ENST00000525970 HHIPL2Q6UWX4 724 aa6.15□□□□□ -1.42
CSDE1-211ENST00000525970 LHFPL2Q6ZUX7 228 aa6.15□□□□□ -1.42
CSDE1-211ENST00000525970 PPIL6Q8IXY8 311 aa6.15□□□□□ -1.42
CSDE1-211ENST00000525970 NETO2Q8NC67 525 aa6.15□□□□□ -1.42
CSDE1-211ENST00000525970 ATL2Q8NHH9 583 aa6.15□□□□□ -1.42
CSDE1-211ENST00000525970 CPA5Q8WXQ8 436 aa6.15□□□□□ -1.42
CSDE1-211ENST00000525970 PTPRN2Q92932 1015 aa6.15□□□□□ -1.42
CSDE1-211ENST00000525970 ORAI3Q9BRQ5 295 aa6.15□□□□□ -1.42
CSDE1-211ENST00000525970 GABBR1Q9UBS5 961 aa6.15□□□□□ -1.42
CSDE1-211ENST00000525970 NDOR1Q9UHB4 597 aa6.15□□□□□ -1.42
CSDE1-211ENST00000525970 TMEFF2Q9UIK5 374 aaPredicted RBP6.15□□□□□ -1.42
CSDE1-211ENST00000525970 PALD1Q9ULE6 856 aa6.15□□□□□ -1.42
CSDE1-211ENST00000525970 PLA2G2DQ9UNK4 145 aa6.15□□□□□ -1.42
CSDE1-211ENST00000525970 MYRFQ9Y2G1 1151 aa6.15□□□□□ -1.42
CSDE1-211ENST00000525970 A0A1B0GTL3 188 aa6.14□□□□□ -1.43
CSDE1-211ENST00000525970 TCRBV16S1A1N1A0A5B0 115 aa6.14□□□□□ -1.43
CSDE1-211ENST00000525970 BLACEA4D250 179 aa6.14□□□□□ -1.43
CSDE1-211ENST00000525970 GPR39O43194 453 aa6.14□□□□□ -1.43
CSDE1-211ENST00000525970 TSPAN6O43657 245 aa6.14□□□□□ -1.43
CSDE1-211ENST00000525970 PPP1R11O60927 126 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-211ENST00000525970 FUCA1P04066 466 aa6.14□□□□□ -1.43
CSDE1-211ENST00000525970 DLX2Q07687 328 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-211ENST00000525970 ZNF827Q17R98 1081 aa6.14□□□□□ -1.43
CSDE1-211ENST00000525970 RNF219Q5W0B1 726 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-211ENST00000525970 MAMDC2Q7Z304 686 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-211ENST00000525970 CERS3Q8IU89 383 aa6.14□□□□□ -1.43
CSDE1-211ENST00000525970 CARFQ8N187 725 aa6.14□□□□□ -1.43
CSDE1-211ENST00000525970 KREMEN2Q8NCW0 462 aa6.14□□□□□ -1.43
CSDE1-211ENST00000525970 ZNF526Q8TF50 670 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-211ENST00000525970 LEO1Q8WVC0 666 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-211ENST00000525970 TSR2Q969E8 191 aaKnown RBP6.14□□□□□ -1.43
CSDE1-211ENST00000525970 PEX11GQ96HA9 241 aa6.14□□□□□ -1.43
CSDE1-211ENST00000525970 CHAMP1Q96JM3 812 aa6.14□□□□□ -1.43
CSDE1-211ENST00000525970 POLR3GLQ9BT43 218 aa6.14□□□□□ -1.43
CSDE1-211ENST00000525970 MARCH2Q9P0N8 246 aa6.14□□□□□ -1.43
CSDE1-211ENST00000525970 TCEAL9Q9UHQ7 104 aa6.14□□□□□ -1.43
CSDE1-211ENST00000525970 NUDT5Q9UKK9 219 aa6.14□□□□□ -1.43
CSDE1-211ENST00000525970 TIMM13Q9Y5L4 95 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-211ENST00000525970 ARID4BQ4LE39 1312 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-211ENST00000525970 MYO1BO43795 1136 aa6.13□□□□□ -1.43
CSDE1-211ENST00000525970 NOBOXO60393 691 aa6.13□□□□□ -1.43
CSDE1-211ENST00000525970 KATNA1O75449 491 aa6.13□□□□□ -1.43
CSDE1-211ENST00000525970 CPEP16870 476 aa6.13□□□□□ -1.43
CSDE1-211ENST00000525970 BPIP17213 487 aa6.13□□□□□ -1.43
CSDE1-211ENST00000525970 KCNA6P17658 529 aa6.13□□□□□ -1.43
CSDE1-211ENST00000525970 IGFALSP35858 605 aa6.13□□□□□ -1.43
CSDE1-211ENST00000525970 GJA9P57773 515 aa6.13□□□□□ -1.43
CSDE1-211ENST00000525970 KCNAB2Q13303 367 aa6.13□□□□□ -1.43
CSDE1-211ENST00000525970 MTMR1Q13613 665 aa6.13□□□□□ -1.43
CSDE1-211ENST00000525970 ACBD5Q5T8D3 534 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-211ENST00000525970 DENND5AQ6IQ26 1287 aa6.13□□□□□ -1.43
CSDE1-211ENST00000525970 USP53Q70EK8 1073 aa6.13□□□□□ -1.43
CSDE1-211ENST00000525970 CCDC103Q8IW40 242 aa6.13□□□□□ -1.43
CSDE1-211ENST00000525970 ADGRG2Q8IZP9 1017 aa6.13□□□□□ -1.43
CSDE1-211ENST00000525970 DPF3Q92784 378 aa6.13□□□□□ -1.43
CSDE1-211ENST00000525970 TMPRSS5Q9H3S3 457 aa6.13□□□□□ -1.43
CSDE1-211ENST00000525970 SLC5A4Q9NY91 659 aa6.13□□□□□ -1.43
CSDE1-211ENST00000525970 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.13□□□□□ -1.431e-6■■■□□ 16.8
CSDE1-211ENST00000525970 RIPOR2Q9Y4F9 1068 aa6.13□□□□□ -1.43
CSDE1-211ENST00000525970 PCDHA2Q9Y5H9 948 aa6.13□□□□□ -1.43
CSDE1-211ENST00000525970 ASXL2Q76L83 1435 aa6.13□□□□□ -1.43
CSDE1-211ENST00000525970 ARNTLO00327 626 aa6.12□□□□□ -1.43
CSDE1-211ENST00000525970 BRINP1O60477 761 aa6.12□□□□□ -1.43
CSDE1-211ENST00000525970 RASGRP1O95267 797 aa6.12□□□□□ -1.43
CSDE1-211ENST00000525970 ZBTB7AO95365 584 aa6.12□□□□□ -1.43
CSDE1-211ENST00000525970 LCP1P13796 627 aa6.12□□□□□ -1.43
CSDE1-211ENST00000525970 LTBRP36941 435 aa6.12□□□□□ -1.43
CSDE1-211ENST00000525970 MC3RP41968 323 aa6.12□□□□□ -1.43
CSDE1-211ENST00000525970 RPL11P62913 178 aaKnown RBP6.12□□□□□ -1.43
CSDE1-211ENST00000525970 STRN3Q13033 797 aa6.12□□□□□ -1.43
CSDE1-211ENST00000525970 STAT4Q14765 748 aa6.12□□□□□ -1.43
CSDE1-211ENST00000525970 STYK1Q6J9G0 422 aa6.12□□□□□ -1.43
CSDE1-211ENST00000525970 CEP68Q76N32 757 aa6.12□□□□□ -1.43
CSDE1-211ENST00000525970 WDR66Q8TBY9 1149 aa6.12□□□□□ -1.43
CSDE1-211ENST00000525970 GPR20Q99678 358 aa6.12□□□□□ -1.43
CSDE1-211ENST00000525970 MTA3Q9BTC8 594 aa6.12□□□□□ -1.43
CSDE1-211ENST00000525970 TRIM8Q9BZR9 551 aa6.12□□□□□ -1.43
CSDE1-211ENST00000525970 RXFP1Q9HBX9 757 aa6.12□□□□□ -1.43
CSDE1-211ENST00000525970 PLEKHD1A6NEE1 506 aa6.11□□□□□ -1.43
CSDE1-211ENST00000525970 C22orf46C9J442 243 aa6.11□□□□□ -1.43
CSDE1-211ENST00000525970 PRC1O43663 620 aa6.11□□□□□ -1.43
CSDE1-211ENST00000525970 OPA1O60313 960 aa6.11□□□□□ -1.43
CSDE1-211ENST00000525970 NTRK1P04629 796 aa6.11□□□□□ -1.43
CSDE1-211ENST00000525970 BCL6P41182 706 aa6.11□□□□□ -1.43
CSDE1-211ENST00000525970 NEK2P51955 445 aa6.11□□□□□ -1.43
CSDE1-211ENST00000525970 GTF2A2P52657 109 aa6.11□□□□□ -1.43
CSDE1-211ENST00000525970 CACNB2Q08289 660 aaPredicted RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms