RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 AKAP17AQ02040 695 aaKnown RBP13.29□□□□□ -0.28
HIF3A-209ENST00000525854 MCTP2Q6DN12 878 aa13.29□□□□□ -0.28
HIF3A-209ENST00000525854 LMBR1Q8WVP7 490 aa13.29□□□□□ -0.28
HIF3A-209ENST00000525854 GLG1Q92896 1179 aa13.29□□□□□ -0.28
HIF3A-209ENST00000525854 SDF4Q9BRK5 362 aa13.29□□□□□ -0.28
HIF3A-209ENST00000525854 ZBED2Q9BTP6 218 aa13.29□□□□□ -0.28
HIF3A-209ENST00000525854 ANO3Q9BYT9 981 aa13.29□□□□□ -0.28
HIF3A-209ENST00000525854 SMARCAD1Q9H4L7 1026 aa13.29□□□□□ -0.28
HIF3A-209ENST00000525854 JPH1Q9HDC5 661 aaPredicted RBP13.29□□□□□ -0.28
HIF3A-209ENST00000525854 KCNH7Q9NS40 1196 aa13.29□□□□□ -0.28
HIF3A-209ENST00000525854 SETD4Q9NVD3 440 aa13.29□□□□□ -0.28
HIF3A-209ENST00000525854 PKD2L1Q9P0L9 805 aa13.29□□□□□ -0.28
HIF3A-209ENST00000525854 MYO9BQ13459 2157 aa13.29□□□□□ -0.28
HIF3A-209ENST00000525854 SCN5AQ14524 2016 aa13.29□□□□□ -0.28
HIF3A-209ENST00000525854 CUL9Q8IWT3 2517 aa13.28□□□□□ -0.28
HIF3A-209ENST00000525854 GSTTP1A0A1W2PQM5 241 aa13.28□□□□□ -0.28
HIF3A-209ENST00000525854 ESYT2A0FGR8 921 aa13.28□□□□□ -0.28
HIF3A-209ENST00000525854 ZNF76P36508 570 aa13.28□□□□□ -0.28
HIF3A-209ENST00000525854 SREBF1P36956 1147 aa13.28□□□□□ -0.28
HIF3A-209ENST00000525854 PPFIA1Q13136 1202 aa13.28□□□□□ -0.28
HIF3A-209ENST00000525854 MBTPS1Q14703 1052 aa13.28□□□□□ -0.28
HIF3A-209ENST00000525854 CEP55Q53EZ4 464 aa13.28□□□□□ -0.28
HIF3A-209ENST00000525854 TAF2Q6P1X5 1199 aa13.28□□□□□ -0.28
HIF3A-209ENST00000525854 TNPO1Q92973 898 aaKnown RBP13.28□□□□□ -0.28
HIF3A-209ENST00000525854 AGXT2Q9BYV1 514 aa13.28□□□□□ -0.28
HIF3A-209ENST00000525854 C6orf50Q9HD87 102 aa13.28□□□□□ -0.28
HIF3A-209ENST00000525854 SLC9A2Q9UBY0 812 aa13.28□□□□□ -0.28
HIF3A-209ENST00000525854 TELO2Q9Y4R8 837 aa13.28□□□□□ -0.28
HIF3A-209ENST00000525854 TRIP12Q14669 1992 aaPredicted RBP13.28□□□□□ -0.28
HIF3A-209ENST00000525854 NFASCO94856 1347 aa13.28□□□□□ -0.28
HIF3A-209ENST00000525854 NID2Q14112 1375 aa13.28□□□□□ -0.28
HIF3A-209ENST00000525854 CDH23Q9H251 3354 aa13.28□□□□□ -0.28
HIF3A-209ENST00000525854 PRPF3O43395 683 aaKnown RBP13.27□□□□□ -0.29
HIF3A-209ENST00000525854 GNA11P29992 359 aa13.27□□□□□ -0.29
HIF3A-209ENST00000525854 CLK2P49760 499 aaKnown RBP13.27□□□□□ -0.29
HIF3A-209ENST00000525854 ADAM17P78536 824 aa13.27□□□□□ -0.29
HIF3A-209ENST00000525854 ADGRE1Q14246 886 aa13.27□□□□□ -0.29
HIF3A-209ENST00000525854 NIPA1Q7RTP0 329 aa13.27□□□□□ -0.29
HIF3A-209ENST00000525854 RSPH3Q86UC2 560 aa13.27□□□□□ -0.29
HIF3A-209ENST00000525854 CYP2W1Q8TAV3 490 aa13.27□□□□□ -0.29
HIF3A-209ENST00000525854 SEPT8Q92599 483 aa13.27□□□□□ -0.29
HIF3A-209ENST00000525854 PGBD1Q96JS3 809 aa13.27□□□□□ -0.29
HIF3A-209ENST00000525854 AZI2Q9H6S1 392 aa13.27□□□□□ -0.29
HIF3A-209ENST00000525854 CYP46A1Q9Y6A2 500 aa13.27□□□□□ -0.29
HIF3A-209ENST00000525854 TET1Q8NFU7 2136 aa13.27□□□□□ -0.29
HIF3A-209ENST00000525854 MEIS1O00470 390 aa13.26□□□□□ -0.29
HIF3A-209ENST00000525854 GTPBP6O43824 516 aaPredicted RBP13.26□□□□□ -0.29
HIF3A-209ENST00000525854 GJB5O95377 273 aa13.26□□□□□ -0.29
HIF3A-209ENST00000525854 AMHP03971 560 aa13.26□□□□□ -0.29
HIF3A-209ENST00000525854 RPLP2P05387 115 aaKnown RBP13.26□□□□□ -0.29
HIF3A-209ENST00000525854 CTSHP09668 335 aa13.26□□□□□ -0.29
HIF3A-209ENST00000525854 MARK3P27448 753 aa13.26□□□□□ -0.29
HIF3A-209ENST00000525854 EVCP57679 992 aa13.26□□□□□ -0.29
HIF3A-209ENST00000525854 DEFB103AP81534 67 aa13.26□□□□□ -0.29
HIF3A-209ENST00000525854 TAP1Q03518 808 aa13.26□□□□□ -0.29
HIF3A-209ENST00000525854 GRIK4Q16099 956 aa13.26□□□□□ -0.29
HIF3A-209ENST00000525854 PLEKHG4Q58EX7 1191 aa13.26□□□□□ -0.29
HIF3A-209ENST00000525854 FAM26DQ5JW98 314 aa13.26□□□□□ -0.29
HIF3A-209ENST00000525854 JAKMIP3Q5VZ66 844 aa13.26□□□□□ -0.29
HIF3A-209ENST00000525854 RUFY3Q7L099 469 aa13.26□□□□□ -0.29
HIF3A-209ENST00000525854 RPAINQ86UA6 219 aa13.26□□□□□ -0.29
HIF3A-209ENST00000525854 REXO1Q8N1G1 1221 aaKnown RBP13.26□□□□□ -0.29
HIF3A-209ENST00000525854 USP38Q8NB14 1042 aa13.26□□□□□ -0.29
HIF3A-209ENST00000525854 CCDC148Q8NFR7 591 aa13.26□□□□□ -0.29
HIF3A-209ENST00000525854 DBF4BQ8NFT6 615 aa13.26□□□□□ -0.29
HIF3A-209ENST00000525854 PPM1EQ8WY54 764 aa13.26□□□□□ -0.29
HIF3A-209ENST00000525854 RAD9AQ99638 391 aa13.26□□□□□ -0.29
HIF3A-209ENST00000525854 RNF26Q9BY78 433 aaPredicted RBP13.26□□□□□ -0.29
HIF3A-209ENST00000525854 ZMYND12Q9H0C1 365 aa13.26□□□□□ -0.29
HIF3A-209ENST00000525854 AGO4Q9HCK5 861 aaKnown RBP13.26□□□□□ -0.29
HIF3A-209ENST00000525854 TMEM260Q9NX78 707 aa13.26□□□□□ -0.29
HIF3A-209ENST00000525854 RRN3P2A6NIE6 340 aa13.25□□□□□ -0.29
HIF3A-209ENST00000525854 ARP10275 920 aa13.25□□□□□ -0.29
HIF3A-209ENST00000525854 IFNAR1P17181 557 aa13.25□□□□□ -0.29
HIF3A-209ENST00000525854 PDIA3P30101 505 aaKnown RBP13.25□□□□□ -0.29
HIF3A-209ENST00000525854 ACTR2P61160 394 aa13.25□□□□□ -0.29
HIF3A-209ENST00000525854 TCTN1Q2MV58 587 aa13.25□□□□□ -0.29
HIF3A-209ENST00000525854 ERICH6BQ5W0A0 696 aa13.25□□□□□ -0.29
HIF3A-209ENST00000525854 PLPPR4Q7Z2D5 763 aa13.25□□□□□ -0.29
HIF3A-209ENST00000525854 BICD2Q8TD16 824 aa13.25□□□□□ -0.29
HIF3A-209ENST00000525854 ARNTL2Q8WYA1 636 aa13.25□□□□□ -0.29
HIF3A-209ENST00000525854 APBB2Q92870 758 aa13.25□□□□□ -0.29
HIF3A-209ENST00000525854 TM6SF1Q9BZW5 370 aa13.25□□□□□ -0.29
HIF3A-209ENST00000525854 TSPYL2Q9H2G4 693 aaPredicted RBP13.25□□□□□ -0.29
HIF3A-209ENST00000525854 ZSWIM6Q9HCJ5 1215 aa13.25□□□□□ -0.29
HIF3A-209ENST00000525854 TUBE1Q9UJT0 475 aa13.25□□□□□ -0.29
HIF3A-209ENST00000525854 A0A0C4DFX4 3053 aa13.25□□□□□ -0.29
HIF3A-209ENST00000525854 MBLAC1A4D2B0 266 aaPredicted RBP13.24□□□□□ -0.29
HIF3A-209ENST00000525854 CYP3A4P08684 503 aa13.24□□□□□ -0.29
HIF3A-209ENST00000525854 POU3F3P20264 500 aaPredicted RBP13.24□□□□□ -0.29
HIF3A-209ENST00000525854 SLC26A2P50443 739 aa13.24□□□□□ -0.29
HIF3A-209ENST00000525854 STAT5BP51692 787 aa13.24□□□□□ -0.29
HIF3A-209ENST00000525854 SETQ01105 290 aaPredicted RBP13.24□□□□□ -0.29
HIF3A-209ENST00000525854 ITGB3BPQ13352 177 aaPredicted RBP13.24□□□□□ -0.29
HIF3A-209ENST00000525854 CCDC85BQ15834 202 aaPredicted RBP13.24□□□□□ -0.29
HIF3A-209ENST00000525854 NTRK3Q16288 839 aa13.24□□□□□ -0.29
HIF3A-209ENST00000525854 PKN1Q16512 942 aa13.24□□□□□ -0.29
HIF3A-209ENST00000525854 TMCO2Q7Z6W1 182 aaPredicted RBP13.24□□□□□ -0.29
HIF3A-209ENST00000525854 PLA2G4DQ86XP0 818 aa13.24□□□□□ -0.29
HIF3A-209ENST00000525854 TRIM22Q8IYM9 498 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms