RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 NAT1P18440 290 aa5.53□□□□□ -1.52
CD44-219ENST00000525685 HSD3B2P26439 372 aa5.53□□□□□ -1.52
CD44-219ENST00000525685 GUCY1A3Q02108 690 aa5.53□□□□□ -1.52
CD44-219ENST00000525685 TEPPQ6URK8 271 aa5.53□□□□□ -1.52
CD44-219ENST00000525685 MAMDC2Q7Z304 686 aaPredicted RBP5.53□□□□□ -1.52
CD44-219ENST00000525685 PHOSPHO1Q8TCT1 267 aa5.53□□□□□ -1.52
CD44-219ENST00000525685 DDX1Q92499 740 aaKnown RBP5.53□□□□□ -1.52
CD44-219ENST00000525685 KISS1RQ969F8 398 aaPredicted RBP5.53□□□□□ -1.52
CD44-219ENST00000525685 JAM3Q9BX67 310 aa5.53□□□□□ -1.52
CD44-219ENST00000525685 KRTAP4-11Q9BYQ6 195 aa5.53□□□□□ -1.52
CD44-219ENST00000525685 SMOC1Q9H4F8 434 aa5.53□□□□□ -1.52
CD44-219ENST00000525685 TRAF6Q9Y4K3 522 aa5.53□□□□□ -1.52
CD44-219ENST00000525685 KRIT1O00522 736 aa5.52□□□□□ -1.53
CD44-219ENST00000525685 PLD2O14939 933 aa5.52□□□□□ -1.53
CD44-219ENST00000525685 CNR2P34972 360 aa5.52□□□□□ -1.53
CD44-219ENST00000525685 KRTAP10-2P60368 255 aa5.52□□□□□ -1.53
CD44-219ENST00000525685 GPR85P60893 370 aa5.52□□□□□ -1.53
CD44-219ENST00000525685 PLP2Q04941 152 aa5.52□□□□□ -1.53
CD44-219ENST00000525685 RGL3Q3MIN7 710 aa5.52□□□□□ -1.53
CD44-219ENST00000525685 FAM26FQ5R3K3 315 aa5.52□□□□□ -1.53
CD44-219ENST00000525685 STYK1Q6J9G0 422 aa5.52□□□□□ -1.53
CD44-219ENST00000525685 CYP4F22Q6NT55 531 aa5.52□□□□□ -1.53
CD44-219ENST00000525685 LBX2Q6XYB7 198 aa5.52□□□□□ -1.53
CD44-219ENST00000525685 PIP4K2CQ8TBX8 421 aa5.52□□□□□ -1.53
CD44-219ENST00000525685 ZFYVE21Q9BQ24 234 aa5.52□□□□□ -1.53
CD44-219ENST00000525685 MRPL4Q9BYD3 311 aaKnown RBP5.52□□□□□ -1.53
CD44-219ENST00000525685 NCOA5Q9HCD5 579 aaKnown RBP5.52□□□□□ -1.53
CD44-219ENST00000525685 SLC6A20Q9NP91 592 aa5.52□□□□□ -1.53
CD44-219ENST00000525685 HSPBP1Q9NZL4 362 aa5.52□□□□□ -1.53
CD44-219ENST00000525685 ASH2LQ9UBL3 628 aa5.52□□□□□ -1.53
CD44-219ENST00000525685 WASF3Q9UPY6 502 aa5.52□□□□□ -1.53
CD44-219ENST00000525685 CD2APQ9Y5K6 639 aa5.52□□□□□ -1.53
CD44-219ENST00000525685 MAFKO60675 156 aa5.51□□□□□ -1.53
CD44-219ENST00000525685 ZNF28P17035 718 aa5.51□□□□□ -1.53
CD44-219ENST00000525685 EFEMP1Q12805 493 aa5.51□□□□□ -1.53
CD44-219ENST00000525685 KIZQ2M2Z5 673 aa5.51□□□□□ -1.53
CD44-219ENST00000525685 EP400NLQ6ZTU2 488 aa5.51□□□□□ -1.53
CD44-219ENST00000525685 OTOP3Q7RTS5 596 aa5.51□□□□□ -1.53
CD44-219ENST00000525685 PRRT2Q7Z6L0 340 aaPredicted RBP5.51□□□□□ -1.53
CD44-219ENST00000525685 ZC3H7AQ8IWR0 971 aaKnown RBP5.51□□□□□ -1.53
CD44-219ENST00000525685 FEZ1Q99689 392 aa5.51□□□□□ -1.53
CD44-219ENST00000525685 KCNJ15Q99712 375 aa5.51□□□□□ -1.53
CD44-219ENST00000525685 PCDHA9Q9Y5H5 950 aa5.51□□□□□ -1.53
CD44-219ENST00000525685 PCDHA8Q9Y5H6 950 aa5.51□□□□□ -1.53
CD44-219ENST00000525685 DDX3XO00571 662 aaKnown RBP eCLIP5.5□□□□□ -1.53
CD44-219ENST00000525685 ENPP3O14638 875 aa5.5□□□□□ -1.53
CD44-219ENST00000525685 OPA1O60313 960 aa5.5□□□□□ -1.53
CD44-219ENST00000525685 CRTAMO95727 393 aa5.5□□□□□ -1.53
CD44-219ENST00000525685 SRGAP2CP0DJJ0 459 aa5.5□□□□□ -1.53
CD44-219ENST00000525685 GRK2P25098 689 aa5.5□□□□□ -1.53
CD44-219ENST00000525685 GRK3P35626 688 aa5.5□□□□□ -1.53
CD44-219ENST00000525685 ST5P78524 1137 aa5.5□□□□□ -1.53
CD44-219ENST00000525685 NFKB2Q00653 900 aa5.5□□□□□ -1.53
CD44-219ENST00000525685 PAK1Q13153 545 aa5.5□□□□□ -1.53
CD44-219ENST00000525685 PABPC4Q13310 644 aaKnown RBP eCLIP5.5□□□□□ -1.53
CD44-219ENST00000525685 FNDC3BQ53EP0 1204 aaKnown RBP5.5□□□□□ -1.53
CD44-219ENST00000525685 MCTP2Q6DN12 878 aa5.5□□□□□ -1.53
CD44-219ENST00000525685 TRIM48Q8IWZ4 208 aa5.5□□□□□ -1.53
CD44-219ENST00000525685 TXNDC5Q8NBS9 432 aaKnown RBP5.5□□□□□ -1.53
CD44-219ENST00000525685 TTLL11Q8NHH1 800 aa5.5□□□□□ -1.53
CD44-219ENST00000525685 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.5□□□□□ -1.53
CD44-219ENST00000525685 ZSWIM3Q96MP5 696 aa5.5□□□□□ -1.53
CD44-219ENST00000525685 SLC52A2Q9HAB3 445 aa5.5□□□□□ -1.53
CD44-219ENST00000525685 CATSPERZQ9NTU4 200 aa5.5□□□□□ -1.53
CD44-219ENST00000525685 CNOT11Q9UKZ1 510 aaKnown RBP5.5□□□□□ -1.53
CD44-219ENST00000525685 ASXL2Q76L83 1435 aa5.49□□□□□ -1.53
CD44-219ENST00000525685 NESP48681 1621 aa5.49□□□□□ -1.53
CD44-219ENST00000525685 LOC105371045A0A1W2PR82 267 aa5.49□□□□□ -1.53
CD44-219ENST00000525685 MROH6A6NGR9 719 aa5.49□□□□□ -1.53
CD44-219ENST00000525685 FAM47E-STBD1D6RA91 191 aa5.49□□□□□ -1.53
CD44-219ENST00000525685 SLC27A2O14975 620 aa5.49□□□□□ -1.53
CD44-219ENST00000525685 GSTA4O15217 222 aa5.49□□□□□ -1.53
CD44-219ENST00000525685 FLT3P36888 993 aa5.49□□□□□ -1.53
CD44-219ENST00000525685 KIAA2012Q0VF49 1180 aa5.49□□□□□ -1.53
CD44-219ENST00000525685 TKFCQ3LXA3 575 aa5.49□□□□□ -1.53
CD44-219ENST00000525685 FAM47CQ5HY64 1035 aa5.49□□□□□ -1.53
CD44-219ENST00000525685 HABP4Q5JVS0 413 aaKnown RBP5.49□□□□□ -1.53
CD44-219ENST00000525685 CNNM4Q6P4Q7 775 aa5.49□□□□□ -1.53
CD44-219ENST00000525685 BRAPQ7Z569 592 aa5.49□□□□□ -1.53
CD44-219ENST00000525685 PROSER1Q86XN7 944 aa5.49□□□□□ -1.53
CD44-219ENST00000525685 DHX37Q8IY37 1157 aaKnown RBP5.49□□□□□ -1.53
CD44-219ENST00000525685 CLEC4DQ8WXI8 215 aa5.49□□□□□ -1.53
CD44-219ENST00000525685 CLIC6Q96NY7 704 aa5.49□□□□□ -1.53
CD44-219ENST00000525685 TMEM209Q96SK2 561 aa5.49□□□□□ -1.53
CD44-219ENST00000525685 PDGFDQ9GZP0 370 aaPredicted RBP5.49□□□□□ -1.53
CD44-219ENST00000525685 LAMC3Q9Y6N6 1575 aa5.49□□□□□ -1.53
CD44-219ENST00000525685 C9orf118A6NHY6 69 aa5.48□□□□□ -1.53
CD44-219ENST00000525685 SOD2P04179 222 aa5.48□□□□□ -1.53
CD44-219ENST00000525685 ITGB3P05106 788 aa5.48□□□□□ -1.53
CD44-219ENST00000525685 ADRB1P08588 477 aa5.48□□□□□ -1.53
CD44-219ENST00000525685 C6orf222P0C671 652 aaPredicted RBP5.48□□□□□ -1.53
CD44-219ENST00000525685 GNAT1P11488 350 aa5.48□□□□□ -1.53
CD44-219ENST00000525685 COL6A2P12110 1019 aa5.48□□□□□ -1.53
CD44-219ENST00000525685 CANXP27824 592 aaKnown RBP5.48□□□□□ -1.53
CD44-219ENST00000525685 IL13P35225 146 aa5.48□□□□□ -1.53
CD44-219ENST00000525685 DNM2P50570 870 aa5.48□□□□□ -1.53
CD44-219ENST00000525685 NEK4P51957 841 aa5.48□□□□□ -1.53
CD44-219ENST00000525685 GYS2P54840 703 aa5.48□□□□□ -1.53
CD44-219ENST00000525685 MLLT6P55198 1093 aaPredicted RBP5.48□□□□□ -1.53
CD44-219ENST00000525685 SPATS1Q496A3 300 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms