RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 PRKD3O94806 890 aa6.36□□□□□ -1.39
USP47-206ENST00000525367 GLI4P10075 376 aa6.36□□□□□ -1.39
USP47-206ENST00000525367 CPEP16870 476 aa6.36□□□□□ -1.39
USP47-206ENST00000525367 GDNFP39905 211 aa6.36□□□□□ -1.39
USP47-206ENST00000525367 CYP4F8P98187 520 aa6.36□□□□□ -1.39
USP47-206ENST00000525367 SART3Q15020 963 aaKnown RBP6.36□□□□□ -1.39
USP47-206ENST00000525367 BICRALQ6AI39 1079 aa6.36□□□□□ -1.39
USP47-206ENST00000525367 OTOP1Q7RTM1 612 aa6.36□□□□□ -1.39
USP47-206ENST00000525367 SPATS2Q86XZ4 545 aaKnown RBP6.36□□□□□ -1.39
USP47-206ENST00000525367 OXR1Q8N573 874 aa6.36□□□□□ -1.39
USP47-206ENST00000525367 RNF32Q9H0A6 362 aa6.36□□□□□ -1.39
USP47-206ENST00000525367 PRDM16Q9HAZ2 1276 aa6.36□□□□□ -1.39
USP47-206ENST00000525367 APOBEC2Q9Y235 224 aaKnown RBP6.36□□□□□ -1.39
USP47-206ENST00000525367 ZKSCAN5Q9Y2L8 839 aa6.36□□□□□ -1.39
USP47-206ENST00000525367 GSTA4O15217 222 aa6.35□□□□□ -1.39
USP47-206ENST00000525367 BRINP1O60477 761 aa6.35□□□□□ -1.39
USP47-206ENST00000525367 SLC9A1P19634 815 aa6.35□□□□□ -1.39
USP47-206ENST00000525367 LSSP48449 732 aa6.35□□□□□ -1.39
USP47-206ENST00000525367 IRF9Q00978 393 aa6.35□□□□□ -1.39
USP47-206ENST00000525367 SPIRE1Q08AE8 756 aa6.35□□□□□ -1.39
USP47-206ENST00000525367 HDAC1Q13547 482 aaPredicted RBP6.35□□□□□ -1.39
USP47-206ENST00000525367 PPP2R5AQ15172 486 aa6.35□□□□□ -1.39
USP47-206ENST00000525367 ATP13A4Q4VNC1 1196 aa6.35□□□□□ -1.39
USP47-206ENST00000525367 MROH9Q5TGP6 573 aa6.35□□□□□ -1.39
USP47-206ENST00000525367 FYB2Q5VWT5 728 aa6.35□□□□□ -1.39
USP47-206ENST00000525367 RNF219Q5W0B1 726 aaPredicted RBP6.35□□□□□ -1.39
USP47-206ENST00000525367 RIOX2Q8IUF8 465 aa6.35□□□□□ -1.39
USP47-206ENST00000525367 SPPL2CQ8IUH8 684 aa6.35□□□□□ -1.39
USP47-206ENST00000525367 CNTD1Q8N815 330 aa6.35□□□□□ -1.39
USP47-206ENST00000525367 RC3H2Q9HBD1 1191 aaKnown RBP6.35□□□□□ -1.39
USP47-206ENST00000525367 SLC6A20Q9NP91 592 aa6.35□□□□□ -1.39
USP47-206ENST00000525367 DSEQ9UL01 958 aa6.35□□□□□ -1.39
USP47-206ENST00000525367 SRPK3Q9UPE1 567 aa6.35□□□□□ -1.39
USP47-206ENST00000525367 SLC12A8A0AV02 714 aa6.34□□□□□ -1.39
USP47-206ENST00000525367 ZC3H12DA2A288 527 aaKnown RBP6.34□□□□□ -1.39
USP47-206ENST00000525367 SGSM2O43147 1006 aa6.34□□□□□ -1.39
USP47-206ENST00000525367 WNT11O96014 354 aa6.34□□□□□ -1.39
USP47-206ENST00000525367 KRT18P05783 430 aaKnown RBP6.34□□□□□ -1.39
USP47-206ENST00000525367 DBHP09172 617 aa6.34□□□□□ -1.39
USP47-206ENST00000525367 KPNA1P52294 538 aaPredicted RBP6.34□□□□□ -1.39
USP47-206ENST00000525367 GP2P55259 537 aaKnown RBP6.34□□□□□ -1.39
USP47-206ENST00000525367 ITKQ08881 620 aa6.34□□□□□ -1.39
USP47-206ENST00000525367 TTF1Q15361 905 aaPredicted RBP6.34□□□□□ -1.39
USP47-206ENST00000525367 NR0B2Q15466 257 aa6.34□□□□□ -1.39
USP47-206ENST00000525367 NFE2Q16621 373 aaPredicted RBP6.34□□□□□ -1.39
USP47-206ENST00000525367 STEAP3Q658P3 488 aa6.34□□□□□ -1.39
USP47-206ENST00000525367 TMED8Q6PL24 325 aaPredicted RBP6.34□□□□□ -1.39
USP47-206ENST00000525367 HHIPL2Q6UWX4 724 aa6.34□□□□□ -1.39
USP47-206ENST00000525367 HDGFL2Q7Z4V5 671 aaPredicted RBP6.34□□□□□ -1.39
USP47-206ENST00000525367 TICAM2Q86XR7 235 aa6.34□□□□□ -1.39
USP47-206ENST00000525367 ABI1Q8IZP0 508 aa6.34□□□□□ -1.39
USP47-206ENST00000525367 UHMK1Q8TAS1 419 aaKnown RBP6.34□□□□□ -1.39
USP47-206ENST00000525367 MYLIPQ8WY64 445 aa6.34□□□□□ -1.39
USP47-206ENST00000525367 TSR2Q969E8 191 aaKnown RBP6.34□□□□□ -1.39
USP47-206ENST00000525367 BOCQ9BWV1 1114 aa6.34□□□□□ -1.39
USP47-206ENST00000525367 BCAS3Q9H6U6 928 aa6.34□□□□□ -1.39
USP47-206ENST00000525367 TNFRSF12AQ9NP84 129 aa6.34□□□□□ -1.39
USP47-206ENST00000525367 TRHDEQ9UKU6 1024 aa6.34□□□□□ -1.39
USP47-206ENST00000525367 PLA2G2DQ9UNK4 145 aa6.34□□□□□ -1.39
USP47-206ENST00000525367 COMMD10Q9Y6G5 202 aa6.34□□□□□ -1.39
USP47-206ENST00000525367 A0A1W2PQJ5 194 aa6.33□□□□□ -1.4
USP47-206ENST00000525367 TSPAN6O43657 245 aa6.33□□□□□ -1.4
USP47-206ENST00000525367 ZEB2O60315 1214 aa6.33□□□□□ -1.4
USP47-206ENST00000525367 GNALP38405 381 aa6.33□□□□□ -1.4
USP47-206ENST00000525367 UBE4AQ14139 1066 aa6.33□□□□□ -1.4
USP47-206ENST00000525367 TSHZ1Q6ZSZ6 1077 aa6.33□□□□□ -1.4
USP47-206ENST00000525367 NECAB2Q7Z6G3 386 aa6.33□□□□□ -1.4
USP47-206ENST00000525367 CMIPQ8IY22 773 aa6.33□□□□□ -1.4
USP47-206ENST00000525367 KIAA1958Q8N8K9 716 aa6.33□□□□□ -1.4
USP47-206ENST00000525367 CLRN3Q8NCR9 226 aa6.33□□□□□ -1.4
USP47-206ENST00000525367 ELF4Q99607 663 aaPredicted RBP6.33□□□□□ -1.4
USP47-206ENST00000525367 PALD1Q9ULE6 856 aa6.33□□□□□ -1.4
USP47-206ENST00000525367 FAM90A27PA6NNH2 459 aa6.32□□□□□ -1.4
USP47-206ENST00000525367 NUDT19A8MXV4 375 aa6.32□□□□□ -1.4
USP47-206ENST00000525367 TADA3O75528 432 aa6.32□□□□□ -1.4
USP47-206ENST00000525367 PTX3P26022 381 aaPredicted RBP6.32□□□□□ -1.4
USP47-206ENST00000525367 KIF11P52732 1056 aa6.32□□□□□ -1.4
USP47-206ENST00000525367 GRIN1Q05586 938 aa6.32□□□□□ -1.4
USP47-206ENST00000525367 TUSC3Q13454 348 aa6.32□□□□□ -1.4
USP47-206ENST00000525367 HLTFQ14527 1009 aaKnown RBP eCLIP6.32□□□□□ -1.4
USP47-206ENST00000525367 FIGNQ5HY92 759 aa6.32□□□□□ -1.4
USP47-206ENST00000525367 EMC4Q5J8M3 183 aa6.32□□□□□ -1.4
USP47-206ENST00000525367 IQSEC1Q6DN90 963 aa6.32□□□□□ -1.4
USP47-206ENST00000525367 ESRP1Q6NXG1 681 aaKnown RBP6.32□□□□□ -1.4
USP47-206ENST00000525367 KCTD1Q719H9 257 aa6.32□□□□□ -1.4
USP47-206ENST00000525367 ARRDC4Q8NCT1 418 aa6.32□□□□□ -1.4
USP47-206ENST00000525367 AGBL5Q8NDL9 886 aa6.32□□□□□ -1.4
USP47-206ENST00000525367 CLEC4DQ8WXI8 215 aa6.32□□□□□ -1.4
USP47-206ENST00000525367 UBA5Q9GZZ9 404 aa6.32□□□□□ -1.4
USP47-206ENST00000525367 MYOTQ9UBF9 498 aa6.32□□□□□ -1.4
USP47-206ENST00000525367 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.31□□□□□ -1.4
USP47-206ENST00000525367 RASSF10A6NK89 507 aa6.31□□□□□ -1.4
USP47-206ENST00000525367 H7C1D1 291 aa6.31□□□□□ -1.4
USP47-206ENST00000525367 KRIT1O00522 736 aa6.31□□□□□ -1.4
USP47-206ENST00000525367 GABRDO14764 452 aa6.31□□□□□ -1.4
USP47-206ENST00000525367 PNLIPP16233 465 aa6.31□□□□□ -1.4
USP47-206ENST00000525367 SLC6A11P48066 632 aa6.31□□□□□ -1.4
USP47-206ENST00000525367 ARHGAP44Q17R89 818 aa6.31□□□□□ -1.4
USP47-206ENST00000525367 ABCB5Q2M3G0 1257 aa6.31□□□□□ -1.4
USP47-206ENST00000525367 BROXQ5VW32 411 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms