RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 MRFAP1L1Q96HT8 127 aa13.13□□□□□ -0.31
CSTF3-205ENST00000524775 SENP7Q9BQF6 1050 aa13.13□□□□□ -0.31
CSTF3-205ENST00000524775 PAGR1Q9BTK6 254 aa13.13□□□□□ -0.31
CSTF3-205ENST00000524775 LRRC27Q9C0I9 530 aa13.13□□□□□ -0.31
CSTF3-205ENST00000524775 BCAS3Q9H6U6 928 aa13.13□□□□□ -0.31
CSTF3-205ENST00000524775 TBC1D22BQ9NU19 505 aa13.13□□□□□ -0.31
CSTF3-205ENST00000524775 RWDD2AQ9UIY3 292 aa13.13□□□□□ -0.31
CSTF3-205ENST00000524775 PASKQ96RG2 1323 aa13.13□□□□□ -0.31
CSTF3-205ENST00000524775 CCL15-CCL14A0A0B4J2E2 113 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 NPHP3-ACAD11A0A0J9YXS1 232 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 PDHXO00330 501 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 ZBTB39O15060 712 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 MAFGO15525 162 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 STAM2O75886 525 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 COPB2P35606 906 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 ALDH5A1P51649 535 aaPredicted RBP13.12□□□□□ -0.31
CSTF3-205ENST00000524775 ERVK-9P63128 1117 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 ERVK-24P63145 666 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 FANCCQ00597 558 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 CYP4A11Q02928 519 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 PDE4DQ08499 809 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 GIT2Q14161 759 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 CCL15Q16663 113 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.12□□□□□ -0.31
CSTF3-205ENST00000524775 GPBP1Q86WP2 473 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 NCAPG2Q86XI2 1143 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 ANKRD35Q8N283 1001 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 FAM43AQ8N2R8 423 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 ZNF526Q8TF50 670 aaPredicted RBP13.12□□□□□ -0.31
CSTF3-205ENST00000524775 GTF3C2Q8WUA4 911 aaPredicted RBP13.12□□□□□ -0.31
CSTF3-205ENST00000524775 NELFBQ8WX92 580 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 GTPBP4Q9BZE4 634 aaKnown RBP13.12□□□□□ -0.31
CSTF3-205ENST00000524775 TRIM5Q9C035 493 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 SAMSN1Q9NSI8 373 aaKnown RBP13.12□□□□□ -0.31
CSTF3-205ENST00000524775 MORF4L1Q9UBU8 362 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 DNM3Q9UQ16 869 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 CTNND2Q9UQB3 1225 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 NFE2L3Q9Y4A8 694 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 TELO2Q9Y4R8 837 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 NFASCO94856 1347 aa13.12□□□□□ -0.31
CSTF3-205ENST00000524775 ZNF236Q9UL36 1845 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 MGAMO43451 1857 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 CHMP2AO43633 222 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 COBLO75128 1261 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 EIF3JO75822 258 aaKnown RBP13.11□□□□□ -0.31
CSTF3-205ENST00000524775 STBD1O95210 358 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 LYPLA2O95372 231 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 PMS1P54277 932 aaKnown RBP13.11□□□□□ -0.31
CSTF3-205ENST00000524775 STX17P56962 302 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 PLCB2Q00722 1185 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 SP2Q02086 613 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 COASYQ13057 564 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 MKRN3Q13064 507 aaKnown RBP13.11□□□□□ -0.31
CSTF3-205ENST00000524775 PSMD2Q13200 908 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 HS1BP3Q53T59 392 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 KLHL10Q6JEL2 608 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 TTI2Q6NXR4 508 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 C1orf186Q6ZWK4 172 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 MIER3Q7Z3K6 550 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 NLRX1Q86UT6 975 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 IRF2BP1Q8IU81 584 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 NEK9Q8TD19 979 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 MORC4Q8TE76 937 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 DHTKD1Q96HY7 919 aaPredicted RBP13.11□□□□□ -0.31
CSTF3-205ENST00000524775 DUSP9Q99956 384 aaKnown RBP13.11□□□□□ -0.31
CSTF3-205ENST00000524775 PORCNQ9H237 461 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 MROH8Q9H579 483 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 EXOC1Q9NV70 894 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 INTS13Q9NVM9 706 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 PKD2L1Q9P0L9 805 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 PNMA3Q9UL41 463 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 MAPK8IP1Q9UQF2 711 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 ADGRA2Q96PE1 1338 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 SYNRGQ9UMZ2 1314 aa13.11□□□□□ -0.31
CSTF3-205ENST00000524775 POTEB2H3BUK9 544 aa13.1□□□□□ -0.31
CSTF3-205ENST00000524775 DDX39AO00148 427 aaKnown RBP13.1□□□□□ -0.31
CSTF3-205ENST00000524775 PAK1Q13153 545 aa13.1□□□□□ -0.31
CSTF3-205ENST00000524775 UGCGQ16739 394 aa13.1□□□□□ -0.31
CSTF3-205ENST00000524775 ZNF746Q6NUN9 644 aaPredicted RBP13.1□□□□□ -0.31
CSTF3-205ENST00000524775 RINT1Q6NUQ1 792 aa13.1□□□□□ -0.31
CSTF3-205ENST00000524775 RASAL3Q86YV0 1011 aa13.1□□□□□ -0.31
CSTF3-205ENST00000524775 TPH2Q8IWU9 490 aa13.1□□□□□ -0.31
CSTF3-205ENST00000524775 GLIS3Q8NEA6 775 aa13.1□□□□□ -0.31
CSTF3-205ENST00000524775 NAP1L5Q96NT1 182 aaPredicted RBP13.1□□□□□ -0.31
CSTF3-205ENST00000524775 NACC1Q96RE7 527 aa13.1□□□□□ -0.31
CSTF3-205ENST00000524775 RUSC1Q9BVN2 902 aa13.1□□□□□ -0.31
CSTF3-205ENST00000524775 FGFBP2Q9BYJ0 223 aa13.1□□□□□ -0.31
CSTF3-205ENST00000524775 XPO4Q9C0E2 1151 aaKnown RBP13.1□□□□□ -0.31
CSTF3-205ENST00000524775 SEMA6BQ9H3T3 888 aa13.1□□□□□ -0.31
CSTF3-205ENST00000524775 PANK4Q9NVE7 773 aa13.1□□□□□ -0.31
CSTF3-205ENST00000524775 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.1□□□□□ -0.31
CSTF3-205ENST00000524775 IFNKQ9P0W0 207 aa13.1□□□□□ -0.31
CSTF3-205ENST00000524775 TRIM49BA6NDI0 452 aa13.09□□□□□ -0.31
CSTF3-205ENST00000524775 SSBP05455 408 aaKnown RBP eCLIP13.09□□□□□ -0.31
CSTF3-205ENST00000524775 P4HBP07237 508 aaKnown RBP13.09□□□□□ -0.31
CSTF3-205ENST00000524775 CCNE1P24864 410 aa13.09□□□□□ -0.31
CSTF3-205ENST00000524775 HUNKP57058 714 aa13.09□□□□□ -0.31
CSTF3-205ENST00000524775 KRT76Q01546 638 aa13.09□□□□□ -0.31
CSTF3-205ENST00000524775 STXBP2Q15833 593 aa13.09□□□□□ -0.31
CSTF3-205ENST00000524775 CENPPQ6IPU0 288 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms