RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 GNA14O95837 355 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 POTEIP0CG38 1075 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 ARP10275 920 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 CETPP11597 493 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 ATP1A3P13637 1013 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 CD44P16070 742 aaKnown RBP11.08□□□□□ -0.64
VPS13B-212ENST00000524330 CYP11B2P19099 503 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 GTF2A2P52657 109 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 SLC12A3P55017 1021 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 COASYQ13057 564 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 DGKZQ13574 1117 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 KCNJ12Q14500 433 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 PWP2Q15269 919 aaKnown RBP11.08□□□□□ -0.64
VPS13B-212ENST00000524330 STXBP2Q15833 593 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 SPECC1LQ69YQ0 1117 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 ZNF746Q6NUN9 644 aaPredicted RBP11.08□□□□□ -0.64
VPS13B-212ENST00000524330 POTEGQ6S5H5 508 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 POTEEQ6S8J3 1075 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 SLC30A10Q6XR72 485 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 VSIG10LQ86VR7 867 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 CREBRFQ8IUR6 639 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 SMAP1Q8IYB5 467 aaPredicted RBP11.08□□□□□ -0.64
VPS13B-212ENST00000524330 SMYD4Q8IYR2 804 aaPredicted RBP11.08□□□□□ -0.64
VPS13B-212ENST00000524330 SLC17A8Q8NDX2 589 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 CYP2W1Q8TAV3 490 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 OPTNQ96CV9 577 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 DYDC2Q96IM9 177 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 HSD17B14Q9BPX1 270 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 UNC45AQ9H3U1 944 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 ZHX3Q9H4I2 956 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 SAMSN1Q9NSI8 373 aaKnown RBP11.08□□□□□ -0.64
VPS13B-212ENST00000524330 CYP39A1Q9NYL5 469 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 KCNG1Q9UIX4 513 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 FZD1Q9UP38 647 aa11.08□□□□□ -0.64
VPS13B-212ENST00000524330 POTEB2H3BUK9 544 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 EIF3JO75822 258 aaKnown RBP11.07□□□□□ -0.64
VPS13B-212ENST00000524330 SPATA31C1P0DKV0 1188 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 ITGB5P18084 799 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 MTIF2P46199 727 aaKnown RBP11.07□□□□□ -0.64
VPS13B-212ENST00000524330 QARSP47897 775 aaKnown RBP11.07□□□□□ -0.64
VPS13B-212ENST00000524330 HERVK_113P62684 666 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 CYP4A11Q02928 519 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 ALCAMQ13740 583 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 TSR1Q2NL82 804 aaKnown RBP11.07□□□□□ -0.64
VPS13B-212ENST00000524330 TCP11X2Q5H9J9 407 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 FKBP15Q5T1M5 1219 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 LDLRAD1Q5T700 205 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 CENPPQ6IPU0 288 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 KCNV1Q6PIU1 500 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.07□□□□□ -0.64
VPS13B-212ENST00000524330 OTUD6AQ7L8S5 288 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 NCAPG2Q86XI2 1143 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 LRRC8AQ8IWT6 810 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 ATP6V0A1Q93050 837 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 GJA10Q969M2 543 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 CCDC51Q96ER9 411 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 SRRTQ9BXP5 876 aaKnown RBP11.07□□□□□ -0.64
VPS13B-212ENST00000524330 SPATC1LQ9H0A9 340 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 ASCC2Q9H1I8 757 aaPredicted RBP11.07□□□□□ -0.64
VPS13B-212ENST00000524330 BHMT2Q9H2M3 363 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 MROH8Q9H579 483 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 SLC39A2Q9NP94 309 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 A1CFQ9NQ94 594 aaKnown RBP11.07□□□□□ -0.64
VPS13B-212ENST00000524330 COL20A1Q9P218 1284 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 ODF2LQ9ULJ1 636 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 SLC45A1Q9Y2W3 748 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 LOC285556D6RIA3 1793 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 NFASCO94856 1347 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 UBE4BO95155 1302 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 ITIH6Q6UXX5 1313 aa11.07□□□□□ -0.64
VPS13B-212ENST00000524330 LRRC10BA6NIK2 292 aa11.06□□□□□ -0.64
VPS13B-212ENST00000524330 PES1O00541 588 aaKnown RBP11.06□□□□□ -0.64
VPS13B-212ENST00000524330 CALUO43852 315 aaPredicted RBP11.06□□□□□ -0.64
VPS13B-212ENST00000524330 SLITRK3O94933 977 aa11.06□□□□□ -0.64
VPS13B-212ENST00000524330 LYPLA2O95372 231 aa11.06□□□□□ -0.64
VPS13B-212ENST00000524330 PSAPP07602 524 aa11.06□□□□□ -0.64
VPS13B-212ENST00000524330 RPL13P26373 211 aaKnown RBP11.06□□□□□ -0.64
VPS13B-212ENST00000524330 ABCD1P33897 745 aa11.06□□□□□ -0.64
VPS13B-212ENST00000524330 DNM2P50570 870 aa11.06□□□□□ -0.64
VPS13B-212ENST00000524330 COPB1P53618 953 aaKnown RBP11.06□□□□□ -0.64
VPS13B-212ENST00000524330 PSMC5P62195 406 aa11.06□□□□□ -0.64
VPS13B-212ENST00000524330 FKBP3Q00688 224 aaKnown RBP11.06□□□□□ -0.64
VPS13B-212ENST00000524330 STK4Q13043 487 aa11.06□□□□□ -0.64
VPS13B-212ENST00000524330 CTTNQ14247 550 aaKnown RBP11.06□□□□□ -0.64
VPS13B-212ENST00000524330 KCTD2Q14681 263 aa11.06□□□□□ -0.64
VPS13B-212ENST00000524330 NR1I3Q14994 352 aa11.06□□□□□ -0.64
VPS13B-212ENST00000524330 DNTTIP2Q5QJE6 756 aaKnown RBP11.06□□□□□ -0.64
VPS13B-212ENST00000524330 TREML2Q5T2D2 321 aa11.06□□□□□ -0.64
VPS13B-212ENST00000524330 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.06□□□□□ -0.64
VPS13B-212ENST00000524330 KCNK18Q7Z418 384 aa11.06□□□□□ -0.64
VPS13B-212ENST00000524330 SHCBP1Q8NEM2 672 aa11.06□□□□□ -0.64
VPS13B-212ENST00000524330 DNAJC19Q96DA6 116 aa11.06□□□□□ -0.64
VPS13B-212ENST00000524330 CEP63Q96MT8 703 aa11.06□□□□□ -0.64
VPS13B-212ENST00000524330 SENP7Q9BQF6 1050 aa11.06□□□□□ -0.64
VPS13B-212ENST00000524330 LXNQ9BS40 222 aa11.06□□□□□ -0.64
VPS13B-212ENST00000524330 PAGR1Q9BTK6 254 aa11.06□□□□□ -0.64
VPS13B-212ENST00000524330 NUP58Q9BVL2 599 aa11.06□□□□□ -0.64
VPS13B-212ENST00000524330 HSD3B7Q9H2F3 369 aa11.06□□□□□ -0.64
VPS13B-212ENST00000524330 GBA2Q9HCG7 927 aaPredicted RBP11.06□□□□□ -0.64
VPS13B-212ENST00000524330 RTN4Q9NQC3 1192 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms