RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 NGRNQ9NPE2 291 aaKnown RBP5.35□□□□□ -1.55
SKP1-212ENST00000523966 ACSS2Q9NR19 701 aa5.35□□□□□ -1.55
SKP1-212ENST00000523966 OXSMQ9NWU1 459 aa5.35□□□□□ -1.55
SKP1-212ENST00000523966 SLC5A4Q9NY91 659 aa5.35□□□□□ -1.55
SKP1-212ENST00000523966 FAM53CQ9NYF3 392 aa5.35□□□□□ -1.55
SKP1-212ENST00000523966 TCRBV5S4A2TA0A5A2 114 aa5.34□□□□□ -1.55
SKP1-212ENST00000523966 PRAMEF25A6NGN4 478 aa5.34□□□□□ -1.55
SKP1-212ENST00000523966 NEMP1O14524 444 aa5.34□□□□□ -1.55
SKP1-212ENST00000523966 GPR39O43194 453 aa5.34□□□□□ -1.55
SKP1-212ENST00000523966 BPIP17213 487 aa5.34□□□□□ -1.55
SKP1-212ENST00000523966 CDKN1CP49918 316 aaPredicted RBP5.34□□□□□ -1.55
SKP1-212ENST00000523966 EVA1CP58658 441 aa5.34□□□□□ -1.55
SKP1-212ENST00000523966 GRIN1Q05586 938 aa5.34□□□□□ -1.55
SKP1-212ENST00000523966 CBLL1Q75N03 491 aa5.34□□□□□ -1.55
SKP1-212ENST00000523966 TMC6Q7Z403 805 aa5.34□□□□□ -1.55
SKP1-212ENST00000523966 HDGFL2Q7Z4V5 671 aaPredicted RBP5.34□□□□□ -1.55
SKP1-212ENST00000523966 ZNF605Q86T29 641 aa5.34□□□□□ -1.55
SKP1-212ENST00000523966 RBM12BQ8IXT5 1001 aaKnown RBP5.34□□□□□ -1.55
SKP1-212ENST00000523966 EFHBQ8N7U6 833 aa5.34□□□□□ -1.55
SKP1-212ENST00000523966 KIAA1958Q8N8K9 716 aa5.34□□□□□ -1.55
SKP1-212ENST00000523966 TSPAN17Q96FV3 270 aa5.34□□□□□ -1.55
SKP1-212ENST00000523966 KCNH7Q9NS40 1196 aa5.34□□□□□ -1.55
SKP1-212ENST00000523966 TOMM22Q9NS69 142 aa5.34□□□□□ -1.55
SKP1-212ENST00000523966 TYW1Q9NV66 732 aaKnown RBP5.34□□□□□ -1.55
SKP1-212ENST00000523966 SIRT5Q9NXA8 310 aa5.34□□□□□ -1.55
SKP1-212ENST00000523966 DDX56Q9NY93 547 aaKnown RBP5.34□□□□□ -1.55
SKP1-212ENST00000523966 KLHL14Q9P2G3 628 aa5.34□□□□□ -1.55
SKP1-212ENST00000523966 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.33□□□□□ -1.56
SKP1-212ENST00000523966 TCRBV5S2A0A599 114 aa5.33□□□□□ -1.56
SKP1-212ENST00000523966 BUB1BO60566 1050 aaPredicted RBP5.33□□□□□ -1.56
SKP1-212ENST00000523966 EYA4O95677 639 aa5.33□□□□□ -1.56
SKP1-212ENST00000523966 CYP17A1P05093 508 aa5.33□□□□□ -1.56
SKP1-212ENST00000523966 PTPN1P18031 435 aaKnown RBP5.33□□□□□ -1.56
SKP1-212ENST00000523966 LSP1P33241 339 aa5.33□□□□□ -1.56
SKP1-212ENST00000523966 ADCYAP1R1P41586 468 aa5.33□□□□□ -1.56
SKP1-212ENST00000523966 EPHA5P54756 1037 aa5.33□□□□□ -1.56
SKP1-212ENST00000523966 PLEKHN1Q494U1 663 aaPredicted RBP5.33□□□□□ -1.56
SKP1-212ENST00000523966 CPZQ66K79 652 aa5.33□□□□□ -1.56
SKP1-212ENST00000523966 CC2D1AQ6P1N0 951 aaPredicted RBP5.33□□□□□ -1.56
SKP1-212ENST00000523966 NECAB2Q7Z6G3 386 aa5.33□□□□□ -1.56
SKP1-212ENST00000523966 ZC3H18Q86VM9 953 aaKnown RBP5.33□□□□□ -1.56
SKP1-212ENST00000523966 ZZZ3Q8IYH5 903 aa5.33□□□□□ -1.56
SKP1-212ENST00000523966 SH3RF2Q8TEC5 729 aa5.33□□□□□ -1.56
SKP1-212ENST00000523966 TOE1Q96GM8 510 aaKnown RBP5.33□□□□□ -1.56
SKP1-212ENST00000523966 FAM126AQ9BYI3 521 aaPredicted RBP5.33□□□□□ -1.56
SKP1-212ENST00000523966 SPTLC3Q9NUV7 552 aa5.33□□□□□ -1.56
SKP1-212ENST00000523966 SPO11Q9Y5K1 396 aa5.33□□□□□ -1.56
SKP1-212ENST00000523966 HRKO00198 91 aa5.32□□□□□ -1.56
SKP1-212ENST00000523966 LTFP02788 710 aa5.32□□□□□ -1.56
SKP1-212ENST00000523966 PDGFRBP09619 1106 aa5.32□□□□□ -1.56
SKP1-212ENST00000523966 ZBTB48P10074 688 aaPredicted RBP5.32□□□□□ -1.56
SKP1-212ENST00000523966 SLC9A1P19634 815 aa5.32□□□□□ -1.56
SKP1-212ENST00000523966 ID4P47928 161 aa5.32□□□□□ -1.56
SKP1-212ENST00000523966 SESN3P58005 492 aa5.32□□□□□ -1.56
SKP1-212ENST00000523966 NKX3-2P78367 333 aa5.32□□□□□ -1.56
SKP1-212ENST00000523966 SRSF3P84103 164 aaKnown RBP5.32□□□□□ -1.56
SKP1-212ENST00000523966 ITKQ08881 620 aa5.32□□□□□ -1.56
SKP1-212ENST00000523966 TARBP2Q15633 366 aaKnown RBP5.32□□□□□ -1.56
SKP1-212ENST00000523966 DDB1Q16531 1140 aa5.32□□□□□ -1.56
SKP1-212ENST00000523966 PAN2Q504Q3 1202 aaKnown RBP5.32□□□□□ -1.56
SKP1-212ENST00000523966 ETV3LQ6ZN32 361 aa5.32□□□□□ -1.56
SKP1-212ENST00000523966 NME9Q86XW9 330 aa5.32□□□□□ -1.56
SKP1-212ENST00000523966 RPUSD2Q8IZ73 545 aaKnown RBP5.32□□□□□ -1.56
SKP1-212ENST00000523966 WDR48Q8TAF3 677 aa5.32□□□□□ -1.56
SKP1-212ENST00000523966 CLEC4DQ8WXI8 215 aa5.32□□□□□ -1.56
SKP1-212ENST00000523966 E2F7Q96AV8 911 aa5.32□□□□□ -1.56
SKP1-212ENST00000523966 DIRC2Q96SL1 478 aa5.32□□□□□ -1.56
SKP1-212ENST00000523966 PUS7LQ9H0K6 701 aaKnown RBP5.32□□□□□ -1.56
SKP1-212ENST00000523966 EPB41L4BQ9H329 900 aa5.32□□□□□ -1.56
SKP1-212ENST00000523966 ZNF552Q9H707 407 aaPredicted RBP5.32□□□□□ -1.56
SKP1-212ENST00000523966 METTL14Q9HCE5 456 aaKnown RBP5.32□□□□□ -1.56
SKP1-212ENST00000523966 EMC7Q9NPA0 242 aa5.32□□□□□ -1.56
SKP1-212ENST00000523966 DCP1AQ9NPI6 582 aaPredicted RBP5.32□□□□□ -1.56
SKP1-212ENST00000523966 ARHGAP28Q9P2N2 729 aa5.32□□□□□ -1.56
SKP1-212ENST00000523966 KCNG1Q9UIX4 513 aa5.32□□□□□ -1.56
SKP1-212ENST00000523966 NOC2LQ9Y3T9 749 aaKnown RBP5.32□□□□□ -1.56
SKP1-212ENST00000523966 PHLDB1Q86UU1 1377 aa5.31□□□□□ -1.56
SKP1-212ENST00000523966 FOXP2O15409 715 aa5.31□□□□□ -1.56
SKP1-212ENST00000523966 S100BP04271 92 aaPredicted RBP5.31□□□□□ -1.56
SKP1-212ENST00000523966 NCAM1P13591 858 aa5.31□□□□□ -1.56
SKP1-212ENST00000523966 PFKLP17858 780 aa5.31□□□□□ -1.56
SKP1-212ENST00000523966 POU3F3P20264 500 aaPredicted RBP5.31□□□□□ -1.56
SKP1-212ENST00000523966 VIPR1P32241 457 aa5.31□□□□□ -1.56
SKP1-212ENST00000523966 YBX1P67809 324 aaKnown RBP5.31□□□□□ -1.56
SKP1-212ENST00000523966 EXOSC10Q01780 885 aaKnown RBP5.31□□□□□ -1.56
SKP1-212ENST00000523966 CD300LDQ6UXZ3 194 aa5.31□□□□□ -1.56
SKP1-212ENST00000523966 AMIGO3Q86WK7 504 aa5.31□□□□□ -1.56
SKP1-212ENST00000523966 NOSTRINQ8IVI9 506 aa5.31□□□□□ -1.56
SKP1-212ENST00000523966 ARRDC4Q8NCT1 418 aa5.31□□□□□ -1.56
SKP1-212ENST00000523966 HIPK4Q8NE63 616 aa5.31□□□□□ -1.56
SKP1-212ENST00000523966 TTLL11Q8NHH1 800 aa5.31□□□□□ -1.56
SKP1-212ENST00000523966 DLG3Q92796 817 aa5.31□□□□□ -1.56
SKP1-212ENST00000523966 SLC5A5Q92911 643 aa5.31□□□□□ -1.56
SKP1-212ENST00000523966 ELF4Q99607 663 aaPredicted RBP5.31□□□□□ -1.56
SKP1-212ENST00000523966 NSUN3Q9H649 340 aaKnown RBP5.31□□□□□ -1.56
SKP1-212ENST00000523966 DTLQ9NZJ0 730 aa5.31□□□□□ -1.56
SKP1-212ENST00000523966 H2AFY2Q9P0M6 372 aaPredicted RBP5.31□□□□□ -1.56
SKP1-212ENST00000523966 FAN1Q9Y2M0 1017 aa5.31□□□□□ -1.56
SKP1-212ENST00000523966 B3GALT1Q9Y5Z6 326 aa5.31□□□□□ -1.56
SKP1-212ENST00000523966 FAM90A27PA6NNH2 459 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms