RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 TRIM13O60858 407 aa6.93□□□□□ -1.3
SKP1-211ENST00000523359 AMY2AP04746 511 aa6.93□□□□□ -1.3
SKP1-211ENST00000523359 AMY2BP19961 511 aa6.93□□□□□ -1.3
SKP1-211ENST00000523359 BUD31P41223 144 aaPredicted RBP6.93□□□□□ -1.3
SKP1-211ENST00000523359 SLC6A11P48066 632 aa6.93□□□□□ -1.3
SKP1-211ENST00000523359 LACTBP83111 547 aaPredicted RBP6.93□□□□□ -1.3
SKP1-211ENST00000523359 NR1I3Q14994 352 aa6.93□□□□□ -1.3
SKP1-211ENST00000523359 CHRNA2Q15822 529 aa6.93□□□□□ -1.3
SKP1-211ENST00000523359 SKOR2Q2VWA4 1001 aaPredicted RBP6.93□□□□□ -1.3
SKP1-211ENST00000523359 EMC4Q5J8M3 183 aa6.93□□□□□ -1.3
SKP1-211ENST00000523359 OLFML2BQ68BL8 750 aa6.93□□□□□ -1.3
SKP1-211ENST00000523359 ARHGAP36Q6ZRI8 547 aa6.93□□□□□ -1.3
SKP1-211ENST00000523359 TMC6Q7Z403 805 aa6.93□□□□□ -1.3
SKP1-211ENST00000523359 TMEM151BQ8IW70 566 aa6.93□□□□□ -1.3
SKP1-211ENST00000523359 NXPE1Q8N323 547 aa6.93□□□□□ -1.3
SKP1-211ENST00000523359 MARCH10Q8NA82 808 aaPredicted RBP6.93□□□□□ -1.3
SKP1-211ENST00000523359 MZB1Q8WU39 189 aa6.93□□□□□ -1.3
SKP1-211ENST00000523359 PEX11GQ96HA9 241 aa6.93□□□□□ -1.3
SKP1-211ENST00000523359 KCNC2Q96PR1 638 aa6.93□□□□□ -1.3
SKP1-211ENST00000523359 ZNF891A8MT65 544 aaPredicted RBP6.92□□□□□ -1.3
SKP1-211ENST00000523359 HGSO14964 777 aaPredicted RBP6.92□□□□□ -1.3
SKP1-211ENST00000523359 SLC27A2O14975 620 aa6.92□□□□□ -1.3
SKP1-211ENST00000523359 TADA3O75528 432 aa6.92□□□□□ -1.3
SKP1-211ENST00000523359 MECP2P51608 486 aaKnown RBP6.92□□□□□ -1.3
SKP1-211ENST00000523359 AFF3P51826 1226 aaKnown RBP6.92□□□□□ -1.3
SKP1-211ENST00000523359 DDX46Q7L014 1031 aaKnown RBP6.92□□□□□ -1.3
SKP1-211ENST00000523359 PTRH1Q86Y79 214 aaKnown RBP6.92□□□□□ -1.3
SKP1-211ENST00000523359 RBM12BQ8IXT5 1001 aaKnown RBP6.92□□□□□ -1.3
SKP1-211ENST00000523359 C2orf69Q8N8R5 385 aa6.92□□□□□ -1.3
SKP1-211ENST00000523359 CHST14Q8NCH0 376 aa6.92□□□□□ -1.3
SKP1-211ENST00000523359 UHMK1Q8TAS1 419 aaKnown RBP6.92□□□□□ -1.3
SKP1-211ENST00000523359 ZCRB1Q8TBF4 217 aaKnown RBP6.92□□□□□ -1.3
SKP1-211ENST00000523359 SH3RF2Q8TEC5 729 aa6.92□□□□□ -1.3
SKP1-211ENST00000523359 DACT3Q96B18 629 aaPredicted RBP6.92□□□□□ -1.3
SKP1-211ENST00000523359 CD244Q9BZW8 370 aa6.92□□□□□ -1.3
SKP1-211ENST00000523359 SMOC1Q9H4F8 434 aa6.92□□□□□ -1.3
SKP1-211ENST00000523359 SMURF1Q9HCE7 757 aa6.92□□□□□ -1.3
SKP1-211ENST00000523359 EPB41L4AQ9HCS5 686 aaPredicted RBP6.92□□□□□ -1.3
SKP1-211ENST00000523359 CABP5Q9NP86 173 aa6.92□□□□□ -1.3
SKP1-211ENST00000523359 PCDH12Q9NPG4 1184 aa6.92□□□□□ -1.3
SKP1-211ENST00000523359 DSEQ9UL01 958 aa6.92□□□□□ -1.3
SKP1-211ENST00000523359 PALD1Q9ULE6 856 aa6.92□□□□□ -1.3
SKP1-211ENST00000523359 PCDHB4Q9Y5E5 795 aa6.92□□□□□ -1.3
SKP1-211ENST00000523359 A0A0G2JLL6 359 aaPredicted RBP6.91□□□□□ -1.3
SKP1-211ENST00000523359 AMPD3Q01432 767 aa6.91□□□□□ -1.3
SKP1-211ENST00000523359 VMACQ2NL98 169 aa6.91□□□□□ -1.3
SKP1-211ENST00000523359 PLEKHN1Q494U1 663 aaPredicted RBP6.91□□□□□ -1.3
SKP1-211ENST00000523359 MILR1Q7Z6M3 343 aa6.91□□□□□ -1.3
SKP1-211ENST00000523359 STRA8Q7Z7C7 330 aa6.91□□□□□ -1.3
SKP1-211ENST00000523359 ORAI3Q9BRQ5 295 aa6.91□□□□□ -1.3
SKP1-211ENST00000523359 BCAS3Q9H6U6 928 aa6.91□□□□□ -1.3
SKP1-211ENST00000523359 MYOTQ9UBF9 498 aa6.91□□□□□ -1.3
SKP1-211ENST00000523359 B4GALT6Q9UBX8 382 aa6.91□□□□□ -1.3
SKP1-211ENST00000523359 ZNF652Q9Y2D9 606 aa6.91□□□□□ -1.3
SKP1-211ENST00000523359 PTPDC1A2A3K4 754 aa6.9□□□□□ -1.3
SKP1-211ENST00000523359 MAN2B1O00754 1011 aa6.9□□□□□ -1.3
SKP1-211ENST00000523359 MAFKO60675 156 aa6.9□□□□□ -1.3
SKP1-211ENST00000523359 LTFP02788 710 aa6.9□□□□□ -1.3
SKP1-211ENST00000523359 POU3F3P20264 500 aaPredicted RBP6.9□□□□□ -1.3
SKP1-211ENST00000523359 IBSPP21815 317 aaPredicted RBP6.9□□□□□ -1.3
SKP1-211ENST00000523359 MAPKAPK2P49137 400 aa6.9□□□□□ -1.3
SKP1-211ENST00000523359 NCKAP1LP55160 1127 aa6.9□□□□□ -1.3
SKP1-211ENST00000523359 PRR5P85299 388 aa6.9□□□□□ -1.3
SKP1-211ENST00000523359 NFKB2Q00653 900 aa6.9□□□□□ -1.3
SKP1-211ENST00000523359 STRN3Q13033 797 aa6.9□□□□□ -1.3
SKP1-211ENST00000523359 CYP4F22Q6NT55 531 aa6.9□□□□□ -1.3
SKP1-211ENST00000523359 CNKSR3Q6P9H4 555 aa6.9□□□□□ -1.3
SKP1-211ENST00000523359 ZC3H14Q6PJT7 736 aaKnown RBP6.9□□□□□ -1.3
SKP1-211ENST00000523359 LDHDQ86WU2 507 aa6.9□□□□□ -1.3
SKP1-211ENST00000523359 IGDCC3Q8IVU1 814 aa6.9□□□□□ -1.3
SKP1-211ENST00000523359 TMEFF1Q8IYR6 380 aa6.9□□□□□ -1.3
SKP1-211ENST00000523359 AFAP1L2Q8N4X5 818 aa6.9□□□□□ -1.3
SKP1-211ENST00000523359 RELTQ969Z4 430 aa6.9□□□□□ -1.3
SKP1-211ENST00000523359 CHMP4AQ9BY43 222 aa6.9□□□□□ -1.3
SKP1-211ENST00000523359 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.9□□□□□ -1.3
SKP1-211ENST00000523359 ASH2LQ9UBL3 628 aa6.9□□□□□ -1.3
SKP1-211ENST00000523359 SRPK3Q9UPE1 567 aa6.9□□□□□ -1.3
SKP1-211ENST00000523359 ZKSCAN5Q9Y2L8 839 aa6.9□□□□□ -1.3
SKP1-211ENST00000523359 TCRBV5S2A0A599 114 aa6.89□□□□□ -1.31
SKP1-211ENST00000523359 SLC12A8A0AV02 714 aa6.89□□□□□ -1.31
SKP1-211ENST00000523359 KRT37O76014 449 aa6.89□□□□□ -1.31
SKP1-211ENST00000523359 ZBTB7AO95365 584 aa6.89□□□□□ -1.31
SKP1-211ENST00000523359 F2P00734 622 aa6.89□□□□□ -1.31
SKP1-211ENST00000523359 SCNN1BP51168 640 aa6.89□□□□□ -1.31
SKP1-211ENST00000523359 TMEM62Q0P6H9 643 aa6.89□□□□□ -1.31
SKP1-211ENST00000523359 TUSC3Q13454 348 aa6.89□□□□□ -1.31
SKP1-211ENST00000523359 ARHGAP44Q17R89 818 aa6.89□□□□□ -1.31
SKP1-211ENST00000523359 FSTL4Q6MZW2 842 aa6.89□□□□□ -1.31
SKP1-211ENST00000523359 HHIPL2Q6UWX4 724 aa6.89□□□□□ -1.31
SKP1-211ENST00000523359 EP400NLQ6ZTU2 488 aa6.89□□□□□ -1.31
SKP1-211ENST00000523359 FAM129CQ86XR2 697 aa6.89□□□□□ -1.31
SKP1-211ENST00000523359 KIF18BQ86Y91 864 aa6.89□□□□□ -1.31
SKP1-211ENST00000523359 OR2W6PQ8NHA6 318 aa6.89□□□□□ -1.31
SKP1-211ENST00000523359 PHOSPHO1Q8TCT1 267 aa6.89□□□□□ -1.31
SKP1-211ENST00000523359 PLA2G2DQ9UNK4 145 aa6.89□□□□□ -1.31
SKP1-211ENST00000523359 TELO2Q9Y4R8 837 aa6.89□□□□□ -1.31
SKP1-211ENST00000523359 hCG_2014768A0A024R1R8 64 aa6.88□□□□□ -1.31
SKP1-211ENST00000523359 GAS7O60861 476 aa6.88□□□□□ -1.31
SKP1-211ENST00000523359 DSG1Q02413 1049 aa6.88□□□□□ -1.31
SKP1-211ENST00000523359 SART3Q15020 963 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms