RNA–Protein interactions for RNA: ENST00000523066.1

DENND3-220, Transcript of DENN domain containing 3, humanhuman

TSL 4

Gene DENND3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-220ENST00000523066 LGALS2P05162 132 aa11.96□□□□□ -0.49
DENND3-220ENST00000523066 HOXD8P13378 290 aaPredicted RBP11.96□□□□□ -0.49
DENND3-220ENST00000523066 ZNF200P98182 395 aaPredicted RBP11.96□□□□□ -0.49
DENND3-220ENST00000523066 NR5A1Q13285 461 aa11.96□□□□□ -0.49
DENND3-220ENST00000523066 MFSD10Q14728 455 aa11.96□□□□□ -0.49
DENND3-220ENST00000523066 PRR16Q569H4 304 aa11.96□□□□□ -0.49
DENND3-220ENST00000523066 GDF6Q6KF10 455 aaPredicted RBP11.96□□□□□ -0.49
DENND3-220ENST00000523066 ZSCAN31Q96LW9 406 aaPredicted RBP11.96□□□□□ -0.49
DENND3-220ENST00000523066 HDAC6Q9UBN7 1215 aa11.96□□□□□ -0.49
DENND3-220ENST00000523066 PRKAG2Q9UGJ0 569 aa11.96□□□□□ -0.49
DENND3-220ENST00000523066 CEP290O15078 2479 aa11.95□□□□□ -0.5
DENND3-220ENST00000523066 MROH7Q68CQ1 1323 aa11.95□□□□□ -0.5
DENND3-220ENST00000523066 KIAA0355O15063 1070 aa11.95□□□□□ -0.5
DENND3-220ENST00000523066 TLR3O15455 904 aaKnown RBP11.95□□□□□ -0.5
DENND3-220ENST00000523066 PPFIA4O75335 1185 aa11.95□□□□□ -0.5
DENND3-220ENST00000523066 TDP2O95551 362 aa11.95□□□□□ -0.5
DENND3-220ENST00000523066 RAG1P15918 1043 aa11.95□□□□□ -0.5
DENND3-220ENST00000523066 CYP2C18P33260 490 aa11.95□□□□□ -0.5
DENND3-220ENST00000523066 TCF7P36402 384 aaPredicted RBP11.95□□□□□ -0.5
DENND3-220ENST00000523066 EPHB4P54760 987 aa11.95□□□□□ -0.5
DENND3-220ENST00000523066 INF2Q27J81 1249 aa11.95□□□□□ -0.5
DENND3-220ENST00000523066 KIAA0753Q2KHM9 967 aa11.95□□□□□ -0.5
DENND3-220ENST00000523066 TEX2Q8IWB9 1127 aa11.95□□□□□ -0.5
DENND3-220ENST00000523066 LENG9Q96B70 501 aa11.95□□□□□ -0.5
DENND3-220ENST00000523066 CDHR1Q96JP9 859 aa11.95□□□□□ -0.5
DENND3-220ENST00000523066 CTAGE1Q96RT6 745 aa11.95□□□□□ -0.5
DENND3-220ENST00000523066 H3BRB1 525 aa11.94□□□□□ -0.5
DENND3-220ENST00000523066 DHX15O43143 795 aaKnown RBP11.94□□□□□ -0.5
DENND3-220ENST00000523066 ST18O60284 1047 aa11.94□□□□□ -0.5
DENND3-220ENST00000523066 CCNE2O96020 404 aa11.94□□□□□ -0.5
DENND3-220ENST00000523066 CIITAP33076 1130 aa11.94□□□□□ -0.5
DENND3-220ENST00000523066 CCL23P55773 120 aa11.94□□□□□ -0.5
DENND3-220ENST00000523066 KRT40Q6A162 431 aa11.94□□□□□ -0.5
DENND3-220ENST00000523066 MCTP2Q6DN12 878 aa11.94□□□□□ -0.5
DENND3-220ENST00000523066 NFRKBQ6P4R8 1299 aa11.94□□□□□ -0.5
DENND3-220ENST00000523066 PIK3AP1Q6ZUJ8 805 aa11.94□□□□□ -0.5
DENND3-220ENST00000523066 WASF1Q92558 559 aa11.94□□□□□ -0.5
DENND3-220ENST00000523066 TNFRSF25Q93038 417 aa11.94□□□□□ -0.5
DENND3-220ENST00000523066 TMX3Q96JJ7 454 aa11.94□□□□□ -0.5
DENND3-220ENST00000523066 PCYT2Q99447 389 aa11.94□□□□□ -0.5
DENND3-220ENST00000523066 LBHD1Q9BQE6 289 aaPredicted RBP11.94□□□□□ -0.5
DENND3-220ENST00000523066 UBE2OQ9C0C9 1292 aaKnown RBP11.94□□□□□ -0.5
DENND3-220ENST00000523066 TUT1Q9H6E5 874 aaKnown RBP11.94□□□□□ -0.5
DENND3-220ENST00000523066 JPH1Q9HDC5 661 aaPredicted RBP11.94□□□□□ -0.5
DENND3-220ENST00000523066 SH2B1Q9NRF2 756 aaPredicted RBP11.94□□□□□ -0.5
DENND3-220ENST00000523066 SLC9A2Q9UBY0 812 aa11.94□□□□□ -0.5
DENND3-220ENST00000523066 MYH9P35579 1960 aaKnown RBP11.94□□□□□ -0.5
DENND3-220ENST00000523066 NFASCO94856 1347 aa11.93□□□□□ -0.5
DENND3-220ENST00000523066 BTBD18B2RXH4 712 aa11.93□□□□□ -0.5
DENND3-220ENST00000523066 WNT7AO00755 349 aa11.93□□□□□ -0.5
DENND3-220ENST00000523066 MAFGO15525 162 aa11.93□□□□□ -0.5
DENND3-220ENST00000523066 TIMP1P01033 207 aa11.93□□□□□ -0.5
DENND3-220ENST00000523066 MMP1P03956 469 aa11.93□□□□□ -0.5
DENND3-220ENST00000523066 XBP1P17861 261 aa11.93□□□□□ -0.5
DENND3-220ENST00000523066 MARK3P27448 753 aa11.93□□□□□ -0.5
DENND3-220ENST00000523066 KRT2P35908 639 aa11.93□□□□□ -0.5
DENND3-220ENST00000523066 ACTR2P61160 394 aa11.93□□□□□ -0.5
DENND3-220ENST00000523066 NONOQ15233 471 aaKnown RBP eCLIP11.93□□□□□ -0.5
DENND3-220ENST00000523066 PTGISQ16647 500 aa11.93□□□□□ -0.5
DENND3-220ENST00000523066 HABP4Q5JVS0 413 aaKnown RBP11.93□□□□□ -0.5
DENND3-220ENST00000523066 GALNT17Q6IS24 598 aa11.93□□□□□ -0.5
DENND3-220ENST00000523066 NIPA1Q7RTP0 329 aa11.93□□□□□ -0.5
DENND3-220ENST00000523066 GIMAP8Q8ND71 665 aaPredicted RBP11.93□□□□□ -0.5
DENND3-220ENST00000523066 SEPT1Q8WYJ6 367 aa11.93□□□□□ -0.5
DENND3-220ENST00000523066 DHX38Q92620 1227 aaKnown RBP11.93□□□□□ -0.5
DENND3-220ENST00000523066 WNT8BQ93098 351 aa11.93□□□□□ -0.5
DENND3-220ENST00000523066 SCLYQ96I15 445 aa11.93□□□□□ -0.5
DENND3-220ENST00000523066 PHF12Q96QT6 1004 aa11.93□□□□□ -0.5
DENND3-220ENST00000523066 SDF4Q9BRK5 362 aa11.93□□□□□ -0.5
DENND3-220ENST00000523066 ZNF577Q9BSK1 485 aa11.93□□□□□ -0.5
DENND3-220ENST00000523066 NOC4LQ9BVI4 516 aaKnown RBP11.93□□□□□ -0.5
DENND3-220ENST00000523066 WNT8AQ9H1J5 351 aa11.93□□□□□ -0.5
DENND3-220ENST00000523066 HIPK3Q9H422 1215 aa11.93□□□□□ -0.5
DENND3-220ENST00000523066 RNPEPQ9H4A4 650 aa11.93□□□□□ -0.5
DENND3-220ENST00000523066 GTF2IRD1Q9UHL9 959 aa11.93□□□□□ -0.5
DENND3-220ENST00000523066 TANC1Q9C0D5 1861 aa11.93□□□□□ -0.5
DENND3-220ENST00000523066 CCDC194A0A1B0GVG4 234 aa11.92□□□□□ -0.5
DENND3-220ENST00000523066 IPO5O00410 1097 aaKnown RBP11.92□□□□□ -0.5
DENND3-220ENST00000523066 MSH4O15457 936 aa11.92□□□□□ -0.5
DENND3-220ENST00000523066 SLC37A4O43826 429 aa11.92□□□□□ -0.5
DENND3-220ENST00000523066 SMIM10L2AP0DMW4 78 aa11.92□□□□□ -0.5
DENND3-220ENST00000523066 SMIM10L2BP0DMW5 78 aa11.92□□□□□ -0.5
DENND3-220ENST00000523066 CSF2RAP15509 400 aa11.92□□□□□ -0.5
DENND3-220ENST00000523066 BMP8BP34820 402 aa11.92□□□□□ -0.5
DENND3-220ENST00000523066 USP11P51784 963 aa11.92□□□□□ -0.5
DENND3-220ENST00000523066 PTPN11Q06124 597 aaPredicted RBP11.92□□□□□ -0.5
DENND3-220ENST00000523066 LETM2Q2VYF4 491 aa11.92□□□□□ -0.5
DENND3-220ENST00000523066 C9orf50Q5SZB4 431 aa11.92□□□□□ -0.5
DENND3-220ENST00000523066 KRT25Q7Z3Z0 450 aa11.92□□□□□ -0.5
DENND3-220ENST00000523066 SESTD1Q86VW0 696 aa11.92□□□□□ -0.5
DENND3-220ENST00000523066 DIS3L2Q8IYB7 885 aaKnown RBP11.92□□□□□ -0.5
DENND3-220ENST00000523066 C7orf31Q8N865 590 aa11.92□□□□□ -0.5
DENND3-220ENST00000523066 ZBTB10Q96DT7 871 aa11.92□□□□□ -0.5
DENND3-220ENST00000523066 LLPHQ9BRT6 129 aaKnown RBP11.92□□□□□ -0.5
DENND3-220ENST00000523066 KATNAL1Q9BW62 490 aa11.92□□□□□ -0.5
DENND3-220ENST00000523066 TET1Q8NFU7 2136 aa11.92□□□□□ -0.5
DENND3-220ENST00000523066 ACRP10323 421 aa11.91□□□□□ -0.5
DENND3-220ENST00000523066 SETQ01105 290 aaPredicted RBP11.91□□□□□ -0.5
DENND3-220ENST00000523066 SHHQ15465 462 aa11.91□□□□□ -0.5
DENND3-220ENST00000523066 MFSD5Q6N075 450 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms