RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 MBLAC1A4D2B0 266 aaPredicted RBP10.83□□□□□ -0.68
SDC2-207ENST00000522911 LIFRP42702 1097 aa10.83□□□□□ -0.68
SDC2-207ENST00000522911 TMEM31Q5JXX7 168 aa10.83□□□□□ -0.68
SDC2-207ENST00000522911 NLRX1Q86UT6 975 aa10.83□□□□□ -0.68
SDC2-207ENST00000522911 MYOCDQ8IZQ8 938 aa10.83□□□□□ -0.68
SDC2-207ENST00000522911 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.83□□□□□ -0.68
SDC2-207ENST00000522911 LMBR1Q8WVP7 490 aa10.83□□□□□ -0.68
SDC2-207ENST00000522911 CLP1Q92989 425 aaKnown RBP10.83□□□□□ -0.68
SDC2-207ENST00000522911 RRP36Q96EU6 259 aaKnown RBP10.83□□□□□ -0.68
SDC2-207ENST00000522911 TMEM87BQ96K49 555 aa10.83□□□□□ -0.68
SDC2-207ENST00000522911 C17orf80Q9BSJ5 609 aa10.83□□□□□ -0.68
SDC2-207ENST00000522911 IFIH1Q9BYX4 1025 aaKnown RBP10.83□□□□□ -0.68
SDC2-207ENST00000522911 LMAN2LQ9H0V9 348 aa10.83□□□□□ -0.68
SDC2-207ENST00000522911 BCAS3Q9H6U6 928 aa10.83□□□□□ -0.68
SDC2-207ENST00000522911 LY9Q9HBG7 655 aa10.83□□□□□ -0.68
SDC2-207ENST00000522911 SENP2Q9HC62 589 aa10.83□□□□□ -0.68
SDC2-207ENST00000522911 C11orf16Q9NQ32 467 aa10.83□□□□□ -0.68
SDC2-207ENST00000522911 SETD4Q9NVD3 440 aa10.83□□□□□ -0.68
SDC2-207ENST00000522911 PRKAG3Q9UGI9 489 aa10.83□□□□□ -0.68
SDC2-207ENST00000522911 RWDD3Q9Y3V2 267 aa10.83□□□□□ -0.68
SDC2-207ENST00000522911 GRXCR2A6NFK2 248 aa10.82□□□□□ -0.68
SDC2-207ENST00000522911 LINC00271P0C7V0 271 aa10.82□□□□□ -0.68
SDC2-207ENST00000522911 KCNA2P16389 499 aa10.82□□□□□ -0.68
SDC2-207ENST00000522911 TMEM192Q8IY95 271 aa10.82□□□□□ -0.68
SDC2-207ENST00000522911 ZNF654Q8IZM8 581 aa10.82□□□□□ -0.68
SDC2-207ENST00000522911 CTCFLQ8NI51 663 aaPredicted RBP10.82□□□□□ -0.68
SDC2-207ENST00000522911 CUL5Q93034 780 aa10.82□□□□□ -0.68
SDC2-207ENST00000522911 PABPC5Q96DU9 382 aaKnown RBP10.82□□□□□ -0.68
SDC2-207ENST00000522911 FAM122AQ96E09 287 aa10.82□□□□□ -0.68
SDC2-207ENST00000522911 YME1L1Q96TA2 773 aa10.82□□□□□ -0.68
SDC2-207ENST00000522911 EPHX3Q9H6B9 360 aa10.82□□□□□ -0.68
SDC2-207ENST00000522911 TAF6LQ9Y6J9 622 aa10.82□□□□□ -0.68
SDC2-207ENST00000522911 PIEZO1Q92508 2521 aa10.82□□□□□ -0.68
SDC2-207ENST00000522911 CHRNA1P02708 482 aa10.81□□□□□ -0.68
SDC2-207ENST00000522911 CALM1P0DP23 149 aa10.81□□□□□ -0.68
SDC2-207ENST00000522911 CALM2P0DP24 149 aa10.81□□□□□ -0.68
SDC2-207ENST00000522911 CALM3P0DP25 149 aa10.81□□□□□ -0.68
SDC2-207ENST00000522911 MGAT3Q09327 533 aa10.81□□□□□ -0.68
SDC2-207ENST00000522911 CTC1Q2NKJ3 1217 aa10.81□□□□□ -0.68
SDC2-207ENST00000522911 USP17L6PQ6QN14 398 aa10.81□□□□□ -0.68
SDC2-207ENST00000522911 RSPH3Q86UC2 560 aa10.81□□□□□ -0.68
SDC2-207ENST00000522911 CRIPAKQ8N1N5 446 aa10.81□□□□□ -0.68
SDC2-207ENST00000522911 BANK1Q8NDB2 785 aa10.81□□□□□ -0.68
SDC2-207ENST00000522911 SMARCC2Q8TAQ2 1214 aa10.81□□□□□ -0.68
SDC2-207ENST00000522911 SEPT1Q8WYJ6 367 aa10.81□□□□□ -0.68
SDC2-207ENST00000522911 ZNF689Q96CS4 500 aaPredicted RBP10.81□□□□□ -0.68
SDC2-207ENST00000522911 PLVAPQ9BX97 442 aa10.81□□□□□ -0.68
SDC2-207ENST00000522911 NSUN3Q9H649 340 aaKnown RBP10.81□□□□□ -0.68
SDC2-207ENST00000522911 CD320Q9NPF0 282 aa10.81□□□□□ -0.68
SDC2-207ENST00000522911 ERAP1Q9NZ08 941 aa10.81□□□□□ -0.68
SDC2-207ENST00000522911 SEC63Q9UGP8 760 aaKnown RBP10.81□□□□□ -0.68
SDC2-207ENST00000522911 MTUS1Q9ULD2 1270 aa10.81□□□□□ -0.68
SDC2-207ENST00000522911 FAM50BQ9Y247 325 aa10.81□□□□□ -0.68
SDC2-207ENST00000522911 HCN4Q9Y3Q4 1203 aa10.81□□□□□ -0.68
SDC2-207ENST00000522911 UBIAD1Q9Y5Z9 338 aa10.81□□□□□ -0.68
SDC2-207ENST00000522911 TRIOO75962 3097 aa10.81□□□□□ -0.68
SDC2-207ENST00000522911 BAZ2BQ9UIF8 2168 aaKnown RBP10.8□□□□□ -0.68
SDC2-207ENST00000522911 POTEB3A0JP26 581 aa10.8□□□□□ -0.68
SDC2-207ENST00000522911 RRN3P2A6NIE6 340 aa10.8□□□□□ -0.68
SDC2-207ENST00000522911 PRR33A8MZF0 331 aa10.8□□□□□ -0.68
SDC2-207ENST00000522911 ITGB5P18084 799 aa10.8□□□□□ -0.68
SDC2-207ENST00000522911 KCNA5P22460 613 aa10.8□□□□□ -0.68
SDC2-207ENST00000522911 MCM5P33992 734 aa10.8□□□□□ -0.68
SDC2-207ENST00000522911 TCF7P36402 384 aaPredicted RBP10.8□□□□□ -0.68
SDC2-207ENST00000522911 BMPR1AP36894 532 aa10.8□□□□□ -0.68
SDC2-207ENST00000522911 GPM6BQ13491 265 aa10.8□□□□□ -0.68
SDC2-207ENST00000522911 NAALADL2Q58DX5 795 aa10.8□□□□□ -0.68
SDC2-207ENST00000522911 FAM117BQ6P1L5 589 aa10.8□□□□□ -0.68
SDC2-207ENST00000522911 POTEBQ6S5H4 581 aa10.8□□□□□ -0.68
SDC2-207ENST00000522911 CASC1Q6TDU7 716 aa10.8□□□□□ -0.68
SDC2-207ENST00000522911 SGMS1Q86VZ5 419 aa10.8□□□□□ -0.68
SDC2-207ENST00000522911 TRIM50Q86XT4 487 aa10.8□□□□□ -0.68
SDC2-207ENST00000522911 GJD3Q8N144 294 aa10.8□□□□□ -0.68
SDC2-207ENST00000522911 SRBD1Q8N5C6 995 aaKnown RBP10.8□□□□□ -0.68
SDC2-207ENST00000522911 KHSRPQ92945 711 aaKnown RBP eCLIP10.8□□□□□ -0.687e-7■□□□□ 11.1
SDC2-207ENST00000522911 TNPO1Q92973 898 aaKnown RBP10.8□□□□□ -0.68
SDC2-207ENST00000522911 IL17RAQ96F46 866 aa10.8□□□□□ -0.68
SDC2-207ENST00000522911 C11orf84Q9BUA3 381 aaPredicted RBP10.8□□□□□ -0.68
SDC2-207ENST00000522911 OSBPL7Q9BZF2 842 aa10.8□□□□□ -0.68
SDC2-207ENST00000522911 SMARCAD1Q9H4L7 1026 aa10.8□□□□□ -0.68
SDC2-207ENST00000522911 PSTPIP2Q9H939 334 aa10.8□□□□□ -0.68
SDC2-207ENST00000522911 RTEL1Q9NZ71 1219 aa10.8□□□□□ -0.68
SDC2-207ENST00000522911 RAPGEFL1Q9UHV5 662 aa10.8□□□□□ -0.68
SDC2-207ENST00000522911 RALGAPA2Q2PPJ7 1873 aa10.8□□□□□ -0.68
SDC2-207ENST00000522911 C5orf42Q9H799 3197 aa10.79□□□□□ -0.68
SDC2-207ENST00000522911 GSTTP1A0A1W2PQM5 241 aa10.79□□□□□ -0.68
SDC2-207ENST00000522911 C19orf67A6NJJ6 358 aa10.79□□□□□ -0.68
SDC2-207ENST00000522911 SH2B2O14492 632 aaPredicted RBP10.79□□□□□ -0.68
SDC2-207ENST00000522911 ATP9AO75110 1047 aa10.79□□□□□ -0.68
SDC2-207ENST00000522911 CTSHP09668 335 aa10.79□□□□□ -0.68
SDC2-207ENST00000522911 ALADP13716 330 aa10.79□□□□□ -0.68
SDC2-207ENST00000522911 ARHGAP4P98171 946 aa10.79□□□□□ -0.68
SDC2-207ENST00000522911 LPIN1Q14693 890 aa10.79□□□□□ -0.68
SDC2-207ENST00000522911 FBXO47Q5MNV8 452 aa10.79□□□□□ -0.68
SDC2-207ENST00000522911 MARCH8Q5T0T0 291 aa10.79□□□□□ -0.68
SDC2-207ENST00000522911 PTCRAQ6ISU1 281 aaPredicted RBP10.79□□□□□ -0.68
SDC2-207ENST00000522911 TSHZ1Q6ZSZ6 1077 aa10.79□□□□□ -0.68
SDC2-207ENST00000522911 FIBCD1Q8N539 461 aa10.79□□□□□ -0.68
SDC2-207ENST00000522911 P2RX5Q93086 422 aa10.79□□□□□ -0.68
SDC2-207ENST00000522911 ZFP91Q96JP5 570 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms