RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 JPH1Q9HDC5 661 aaPredicted RBP20.33■□□□□ 0.85
CLK4-211ENST00000522556 WDR81Q562E7 1941 aa20.32■□□□□ 0.84
CLK4-211ENST00000522556 A0A1W2PPC1 479 aa20.32■□□□□ 0.84
CLK4-211ENST00000522556 DHX15O43143 795 aaKnown RBP20.32■□□□□ 0.84
CLK4-211ENST00000522556 TDP2O95551 362 aa20.32■□□□□ 0.84
CLK4-211ENST00000522556 SMIM10L2AP0DMW4 78 aa20.32■□□□□ 0.84
CLK4-211ENST00000522556 SMIM10L2BP0DMW5 78 aa20.32■□□□□ 0.84
CLK4-211ENST00000522556 MARK3P27448 753 aa20.32■□□□□ 0.84
CLK4-211ENST00000522556 CIITAP33076 1130 aa20.32■□□□□ 0.84
CLK4-211ENST00000522556 PRR16Q569H4 304 aa20.32■□□□□ 0.84
CLK4-211ENST00000522556 NIPA1Q7RTP0 329 aa20.32■□□□□ 0.84
CLK4-211ENST00000522556 SEZ6LQ9BYH1 1024 aa20.32■□□□□ 0.84
CLK4-211ENST00000522556 RNPEPQ9H4A4 650 aa20.32■□□□□ 0.84
CLK4-211ENST00000522556 SLC9A2Q9UBY0 812 aa20.32■□□□□ 0.84
CLK4-211ENST00000522556 NFASCO94856 1347 aa20.31■□□□□ 0.84
CLK4-211ENST00000522556 MAFGO15525 162 aa20.31■□□□□ 0.84
CLK4-211ENST00000522556 ACTR2P61160 394 aa20.31■□□□□ 0.84
CLK4-211ENST00000522556 NR5A1Q13285 461 aa20.31■□□□□ 0.84
CLK4-211ENST00000522556 RABEP1Q15276 862 aa20.31■□□□□ 0.84
CLK4-211ENST00000522556 INF2Q27J81 1249 aa20.31■□□□□ 0.84
CLK4-211ENST00000522556 GIMAP8Q8ND71 665 aaPredicted RBP20.31■□□□□ 0.84
CLK4-211ENST00000522556 TET1Q8NFU7 2136 aa20.31■□□□□ 0.84
CLK4-211ENST00000522556 SEPT1Q8WYJ6 367 aa20.31■□□□□ 0.84
CLK4-211ENST00000522556 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.31■□□□□ 0.842e-6■■■□□ 15
CLK4-211ENST00000522556 SUPT20HL2P0C7V6 817 aa20.3■□□□□ 0.84
CLK4-211ENST00000522556 HOXC8P31273 242 aa20.3■□□□□ 0.84
CLK4-211ENST00000522556 TRIM71Q2Q1W2 868 aaKnown RBP20.3■□□□□ 0.84
CLK4-211ENST00000522556 MCTP2Q6DN12 878 aa20.3■□□□□ 0.84
CLK4-211ENST00000522556 ZBTB10Q96DT7 871 aa20.3■□□□□ 0.84
CLK4-211ENST00000522556 SDF4Q9BRK5 362 aa20.3■□□□□ 0.84
CLK4-211ENST00000522556 SETD4Q9NVD3 440 aa20.3■□□□□ 0.84
CLK4-211ENST00000522556 NOD1Q9Y239 953 aa20.3■□□□□ 0.84
CLK4-211ENST00000522556 IPO5O00410 1097 aaKnown RBP20.29■□□□□ 0.84
CLK4-211ENST00000522556 GUCY1B3Q02153 619 aa20.29■□□□□ 0.84
CLK4-211ENST00000522556 TMEM240Q5SV17 173 aa20.29■□□□□ 0.84
CLK4-211ENST00000522556 TNFRSF25Q93038 417 aa20.29■□□□□ 0.84
CLK4-211ENST00000522556 ZNF577Q9BSK1 485 aa20.29■□□□□ 0.84
CLK4-211ENST00000522556 BACH2Q9BYV9 841 aa20.29■□□□□ 0.84
CLK4-211ENST00000522556 SIP14410 1827 aa20.29■□□□□ 0.84
CLK4-211ENST00000522556 EMSYQ7Z589 1322 aa20.28■□□□□ 0.84
CLK4-211ENST00000522556 WNT7AO00755 349 aa20.28■□□□□ 0.84
CLK4-211ENST00000522556 MSH4O15457 936 aa20.28■□□□□ 0.84
CLK4-211ENST00000522556 TREHO43280 583 aa20.28■□□□□ 0.84
CLK4-211ENST00000522556 LGR5O75473 907 aa20.28■□□□□ 0.84
CLK4-211ENST00000522556 PPIGQ13427 754 aaKnown RBP eCLIP20.28■□□□□ 0.84
CLK4-211ENST00000522556 GPNMBQ14956 572 aa20.28■□□□□ 0.84
CLK4-211ENST00000522556 NONOQ15233 471 aaKnown RBP eCLIP20.28■□□□□ 0.84
CLK4-211ENST00000522556 FAM109BQ6ICB4 259 aaPredicted RBP20.28■□□□□ 0.84
CLK4-211ENST00000522556 GALNT17Q6IS24 598 aa20.28■□□□□ 0.84
CLK4-211ENST00000522556 PIK3AP1Q6ZUJ8 805 aa20.28■□□□□ 0.84
CLK4-211ENST00000522556 TMEM199Q8N511 208 aa20.28■□□□□ 0.84
CLK4-211ENST00000522556 LMBR1Q8WVP7 490 aa20.28■□□□□ 0.84
CLK4-211ENST00000522556 KAT6AQ92794 2004 aa20.27■□□□□ 0.84
CLK4-211ENST00000522556 C17orf102A2RUQ5 167 aa20.27■□□□□ 0.84
CLK4-211ENST00000522556 SLC37A4O43826 429 aa20.27■□□□□ 0.84
CLK4-211ENST00000522556 SETQ01105 290 aaPredicted RBP20.27■□□□□ 0.84
CLK4-211ENST00000522556 LRIT3Q3SXY7 679 aa20.27■□□□□ 0.84
CLK4-211ENST00000522556 KRT40Q6A162 431 aa20.27■□□□□ 0.84
CLK4-211ENST00000522556 TRAF7Q6Q0C0 670 aa20.27■□□□□ 0.84
CLK4-211ENST00000522556 ZNF365Q70YC5 407 aa20.27■□□□□ 0.84
CLK4-211ENST00000522556 KRT25Q7Z3Z0 450 aa20.27■□□□□ 0.84
CLK4-211ENST00000522556 DEFB128Q7Z7B8 93 aa20.27■□□□□ 0.84
CLK4-211ENST00000522556 CCDC60Q8IWA6 550 aaPredicted RBP20.27■□□□□ 0.84
CLK4-211ENST00000522556 FAM177A1Q8N128 213 aaPredicted RBP20.27■□□□□ 0.84
CLK4-211ENST00000522556 GLG1Q92896 1179 aa20.27■□□□□ 0.84
CLK4-211ENST00000522556 RNPC3Q96LT9 517 aaKnown RBP20.27■□□□□ 0.84
CLK4-211ENST00000522556 UPF2Q9HAU5 1272 aaKnown RBP20.27■□□□□ 0.84
CLK4-211ENST00000522556 IL23AQ9NPF7 189 aa20.27■□□□□ 0.84
CLK4-211ENST00000522556 ZNF215Q9UL58 517 aaPredicted RBP20.27■□□□□ 0.84
CLK4-211ENST00000522556 LAMA2P24043 3122 aaKnown RBP20.27■□□□□ 0.83
CLK4-211ENST00000522556 GBF1Q92538 1859 aa20.26■□□□□ 0.83
CLK4-211ENST00000522556 SZT2Q5T011 3432 aa20.26■□□□□ 0.83
CLK4-211ENST00000522556 ATG7O95352 703 aa20.26■□□□□ 0.83
CLK4-211ENST00000522556 IQCF3P0C7M6 154 aa20.26■□□□□ 0.83
CLK4-211ENST00000522556 USP11P51784 963 aa20.26■□□□□ 0.83
CLK4-211ENST00000522556 ADAM17P78536 824 aa20.26■□□□□ 0.83
CLK4-211ENST00000522556 WASF1Q92558 559 aa20.26■□□□□ 0.83
CLK4-211ENST00000522556 ATP6V0A1Q93050 837 aa20.26■□□□□ 0.83
CLK4-211ENST00000522556 MBOAT7Q96N66 472 aa20.26■□□□□ 0.83
CLK4-211ENST00000522556 OSBPL7Q9BZF2 842 aa20.26■□□□□ 0.83
CLK4-211ENST00000522556 CXXC1Q9P0U4 656 aaPredicted RBP20.26■□□□□ 0.83
CLK4-211ENST00000522556 PTPRSQ13332 1948 aa20.25■□□□□ 0.83
CLK4-211ENST00000522556 CCDC194A0A1B0GVG4 234 aa20.25■□□□□ 0.83
CLK4-211ENST00000522556 BTBD18B2RXH4 712 aa20.25■□□□□ 0.83
CLK4-211ENST00000522556 PITPNM1O00562 1244 aa20.25■□□□□ 0.83
CLK4-211ENST00000522556 MMP1P03956 469 aa20.25■□□□□ 0.83
CLK4-211ENST00000522556 CKBP12277 381 aa20.25■□□□□ 0.83
CLK4-211ENST00000522556 KRT2P35908 639 aa20.25■□□□□ 0.83
CLK4-211ENST00000522556 PTK7Q13308 1070 aa20.25■□□□□ 0.83
CLK4-211ENST00000522556 MBTPS1Q14703 1052 aa20.25■□□□□ 0.83
CLK4-211ENST00000522556 TCTN1Q2MV58 587 aa20.25■□□□□ 0.83
CLK4-211ENST00000522556 LETM2Q2VYF4 491 aa20.25■□□□□ 0.83
CLK4-211ENST00000522556 ZNF618Q5T7W0 954 aa20.25■□□□□ 0.83
CLK4-211ENST00000522556 ABHD15Q6UXT9 468 aa20.25■□□□□ 0.83
CLK4-211ENST00000522556 RUFY4Q6ZNE9 571 aa20.25■□□□□ 0.83
CLK4-211ENST00000522556 SERINC5Q86VE9 423 aa20.25■□□□□ 0.83
CLK4-211ENST00000522556 TRAPPC12Q8WVT3 735 aa20.25■□□□□ 0.83
CLK4-211ENST00000522556 ZSCAN31Q96LW9 406 aaPredicted RBP20.25■□□□□ 0.83
CLK4-211ENST00000522556 SH2B1Q9NRF2 756 aaPredicted RBP20.25■□□□□ 0.83
CLK4-211ENST00000522556 CYP3A7-CYP3A51PA0A087WV96 503 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms