RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 TRIM27P14373 513 aa10.56□□□□□ -0.72
TRAPPC9-212ENST00000521944 RARSP54136 660 aaKnown RBP10.56□□□□□ -0.72
TRAPPC9-212ENST00000521944 ARHGAP1Q07960 439 aa10.56□□□□□ -0.72
TRAPPC9-212ENST00000521944 PDE4DQ08499 809 aa10.56□□□□□ -0.72
TRAPPC9-212ENST00000521944 SLC30A10Q6XR72 485 aa10.56□□□□□ -0.72
TRAPPC9-212ENST00000521944 AACSQ86V21 672 aa10.56□□□□□ -0.72
TRAPPC9-212ENST00000521944 VN1R2Q8NFZ6 395 aa10.56□□□□□ -0.72
TRAPPC9-212ENST00000521944 SCFD2Q8WU76 684 aa10.56□□□□□ -0.72
TRAPPC9-212ENST00000521944 CLEC4DQ8WXI8 215 aa10.56□□□□□ -0.72
TRAPPC9-212ENST00000521944 C11orf84Q9BUA3 381 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC9-212ENST00000521944 DLL3Q9NYJ7 618 aa10.56□□□□□ -0.72
TRAPPC9-212ENST00000521944 PRR12Q9ULL5 1215 aa10.56□□□□□ -0.72
TRAPPC9-212ENST00000521944 SYNPO2Q9UMS6 1093 aa10.56□□□□□ -0.72
TRAPPC9-212ENST00000521944 PLAGL2Q9UPG8 496 aa10.56□□□□□ -0.72
TRAPPC9-212ENST00000521944 SLC4A4Q9Y6R1 1079 aa10.56□□□□□ -0.72
TRAPPC9-212ENST00000521944 RAD50Q92878 1312 aa10.56□□□□□ -0.72
TRAPPC9-212ENST00000521944 LOC102724159A0A0B4J2E5 919 aa10.55□□□□□ -0.72
TRAPPC9-212ENST00000521944 RSPH10B2B2RC85 870 aa10.55□□□□□ -0.72
TRAPPC9-212ENST00000521944 PRDM1O75626 825 aa10.55□□□□□ -0.72
TRAPPC9-212ENST00000521944 BRD1O95696 1058 aa10.55□□□□□ -0.72
TRAPPC9-212ENST00000521944 RSPH10BP0C881 870 aa10.55□□□□□ -0.72
TRAPPC9-212ENST00000521944 MCCP23508 829 aa10.55□□□□□ -0.72
TRAPPC9-212ENST00000521944 PUM1Q14671 1186 aaKnown RBP eCLIP10.55□□□□□ -0.72
TRAPPC9-212ENST00000521944 PWP2Q15269 919 aaKnown RBP10.55□□□□□ -0.72
TRAPPC9-212ENST00000521944 LY6KQ17RY6 165 aa10.55□□□□□ -0.72
TRAPPC9-212ENST00000521944 SBK1Q52WX2 424 aa10.55□□□□□ -0.72
TRAPPC9-212ENST00000521944 BLOC1S3Q6QNY0 202 aa10.55□□□□□ -0.72
TRAPPC9-212ENST00000521944 KCTD1Q719H9 257 aa10.55□□□□□ -0.72
TRAPPC9-212ENST00000521944 FAM160B2Q86V87 743 aa10.55□□□□□ -0.72
TRAPPC9-212ENST00000521944 PARP9Q8IXQ6 854 aa10.55□□□□□ -0.72
TRAPPC9-212ENST00000521944 FAM9BQ8IZU0 186 aa10.55□□□□□ -0.72
TRAPPC9-212ENST00000521944 FIBCD1Q8N539 461 aa10.55□□□□□ -0.72
TRAPPC9-212ENST00000521944 CHURC1Q8WUH1 139 aa10.55□□□□□ -0.72
TRAPPC9-212ENST00000521944 IL17RAQ96F46 866 aa10.55□□□□□ -0.72
TRAPPC9-212ENST00000521944 GMCL1Q96IK5 515 aa10.55□□□□□ -0.72
TRAPPC9-212ENST00000521944 IFIH1Q9BYX4 1025 aaKnown RBP10.55□□□□□ -0.72
TRAPPC9-212ENST00000521944 PUS7LQ9H0K6 701 aaKnown RBP10.55□□□□□ -0.72
TRAPPC9-212ENST00000521944 C1orf115Q9H7X2 142 aa10.55□□□□□ -0.72
TRAPPC9-212ENST00000521944 ADD3Q9UEY8 706 aaKnown RBP10.55□□□□□ -0.72
TRAPPC9-212ENST00000521944 CCPG1Q9ULG6 757 aa10.55□□□□□ -0.72
TRAPPC9-212ENST00000521944 EMSYQ7Z589 1322 aa10.55□□□□□ -0.72
TRAPPC9-212ENST00000521944 ASPMQ8IZT6 3477 aa10.54□□□□□ -0.72
TRAPPC9-212ENST00000521944 SETXQ7Z333 2677 aaKnown RBP10.54□□□□□ -0.72
TRAPPC9-212ENST00000521944 GSG1L2A8MUP6 293 aa10.54□□□□□ -0.72
TRAPPC9-212ENST00000521944 TTLL1O95922 423 aa10.54□□□□□ -0.72
TRAPPC9-212ENST00000521944 ICAM1P05362 532 aa10.54□□□□□ -0.72
TRAPPC9-212ENST00000521944 ATF7P17544 494 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC9-212ENST00000521944 THPOP40225 353 aa10.54□□□□□ -0.72
TRAPPC9-212ENST00000521944 PDE4BQ07343 736 aa10.54□□□□□ -0.72
TRAPPC9-212ENST00000521944 MCTP2Q6DN12 878 aa10.54□□□□□ -0.72
TRAPPC9-212ENST00000521944 SERINC5Q86VE9 423 aa10.54□□□□□ -0.72
TRAPPC9-212ENST00000521944 KIAA2013Q8IYS2 634 aa10.54□□□□□ -0.72
TRAPPC9-212ENST00000521944 C7orf31Q8N865 590 aa10.54□□□□□ -0.72
TRAPPC9-212ENST00000521944 KREMEN2Q8NCW0 462 aa10.54□□□□□ -0.72
TRAPPC9-212ENST00000521944 SPPL3Q8TCT6 385 aa10.54□□□□□ -0.72
TRAPPC9-212ENST00000521944 ATP8B4Q8TF62 1192 aa10.54□□□□□ -0.72
TRAPPC9-212ENST00000521944 DNAJC2Q99543 621 aaKnown RBP10.54□□□□□ -0.72
TRAPPC9-212ENST00000521944 ALG1Q9BT22 464 aa10.54□□□□□ -0.72
TRAPPC9-212ENST00000521944 S1PR5Q9H228 398 aa10.54□□□□□ -0.72
TRAPPC9-212ENST00000521944 MKNK2Q9HBH9 465 aa10.54□□□□□ -0.72
TRAPPC9-212ENST00000521944 PI15O43692 258 aa10.53□□□□□ -0.72
TRAPPC9-212ENST00000521944 F2P00734 622 aa10.53□□□□□ -0.72
TRAPPC9-212ENST00000521944 ITGB1P05556 798 aa10.53□□□□□ -0.72
TRAPPC9-212ENST00000521944 CALML3P27482 149 aa10.53□□□□□ -0.72
TRAPPC9-212ENST00000521944 NRIP1P48552 1158 aa10.53□□□□□ -0.72
TRAPPC9-212ENST00000521944 FUT2Q10981 343 aa10.53□□□□□ -0.72
TRAPPC9-212ENST00000521944 KIAA0753Q2KHM9 967 aa10.53□□□□□ -0.72
TRAPPC9-212ENST00000521944 RBM23Q86U06 439 aaKnown RBP10.53□□□□□ -0.72
TRAPPC9-212ENST00000521944 AMOTL1Q8IY63 956 aa10.53□□□□□ -0.72
TRAPPC9-212ENST00000521944 ZNF689Q96CS4 500 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC9-212ENST00000521944 STRBPQ96SI9 672 aaKnown RBP10.53□□□□□ -0.72
TRAPPC9-212ENST00000521944 REPIN1Q9BWE0 567 aaKnown RBP10.53□□□□□ -0.72
TRAPPC9-212ENST00000521944 IL1RAPL2Q9NP60 686 aa10.53□□□□□ -0.72
TRAPPC9-212ENST00000521944 ARPP21Q9UBL0 812 aaPredicted RBP10.53□□□□□ -0.72
TRAPPC9-212ENST00000521944 TTC3P53804 2025 aa10.52□□□□□ -0.73
TRAPPC9-212ENST00000521944 PTPDC1A2A3K4 754 aa10.52□□□□□ -0.73
TRAPPC9-212ENST00000521944 ZNF286BP0CG31 522 aa10.52□□□□□ -0.73
TRAPPC9-212ENST00000521944 CASTP20810 708 aaKnown RBP10.52□□□□□ -0.73
TRAPPC9-212ENST00000521944 SLC1A4P43007 532 aa10.52□□□□□ -0.73
TRAPPC9-212ENST00000521944 RPS6P62753 249 aaKnown RBP10.52□□□□□ -0.73
TRAPPC9-212ENST00000521944 COL9A2Q14055 689 aaPredicted RBP10.52□□□□□ -0.73
TRAPPC9-212ENST00000521944 TTBK2Q6IQ55 1244 aa10.52□□□□□ -0.73
TRAPPC9-212ENST00000521944 RCSD1Q6JBY9 416 aa10.52□□□□□ -0.73
TRAPPC9-212ENST00000521944 CHST3Q7LGC8 479 aa10.52□□□□□ -0.73
TRAPPC9-212ENST00000521944 SEPT8Q92599 483 aa10.52□□□□□ -0.73
TRAPPC9-212ENST00000521944 CLUAP1Q96AJ1 413 aa10.52□□□□□ -0.73
TRAPPC9-212ENST00000521944 RANBP17Q9H2T7 1088 aaKnown RBP10.52□□□□□ -0.73
TRAPPC9-212ENST00000521944 CDH22Q9UJ99 828 aa10.52□□□□□ -0.73
TRAPPC9-212ENST00000521944 EXOC6BQ9Y2D4 811 aa10.52□□□□□ -0.73
TRAPPC9-212ENST00000521944 ZZEF1O43149 2961 aa10.52□□□□□ -0.73
TRAPPC9-212ENST00000521944 CEP295Q9C0D2 2601 aa10.51□□□□□ -0.73
TRAPPC9-212ENST00000521944 MINDY4BA8MYZ0 360 aa10.51□□□□□ -0.73
TRAPPC9-212ENST00000521944 PER2O15055 1255 aa10.51□□□□□ -0.73
TRAPPC9-212ENST00000521944 GH1P01241 217 aa10.51□□□□□ -0.73
TRAPPC9-212ENST00000521944 CT47B1P0C2W7 299 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC9-212ENST00000521944 HOXD8P13378 290 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC9-212ENST00000521944 NPR3P17342 541 aa10.51□□□□□ -0.73
TRAPPC9-212ENST00000521944 SP100P23497 879 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC9-212ENST00000521944 HOXC8P31273 242 aa10.51□□□□□ -0.73
TRAPPC9-212ENST00000521944 SLC16A2P36021 539 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms