RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 PDE11AQ9HCR9 933 aa17.59■□□□□ 0.41
USP42-207ENST00000521713 CPS1P31327 1500 aa17.59■□□□□ 0.41
USP42-207ENST00000521713 PPP1R2P3Q6NXS1 205 aa17.59■□□□□ 0.41
USP42-207ENST00000521713 GPIHBP1Q8IV16 184 aa17.59■□□□□ 0.41
USP42-207ENST00000521713 TCP11Q8WWU5 503 aa17.59■□□□□ 0.41
USP42-207ENST00000521713 MEIS1O00470 390 aa17.59■□□□□ 0.41
USP42-207ENST00000521713 HOXD10P28358 340 aa17.59■□□□□ 0.41
USP42-207ENST00000521713 MB21D2Q8IYB1 491 aaPredicted RBP17.59■□□□□ 0.41
USP42-207ENST00000521713 RAVER2Q9HCJ3 691 aaKnown RBP17.59■□□□□ 0.41
USP42-207ENST00000521713 PCDHB6Q9Y5E3 794 aa17.59■□□□□ 0.41
USP42-207ENST00000521713 USP42Q9H9J4 1324 aaKnown RBP17.59■□□□□ 0.41
USP42-207ENST00000521713 RNF8O76064 485 aa17.59■□□□□ 0.41
USP42-207ENST00000521713 TROVE2P10155 538 aaKnown RBP eCLIP17.59■□□□□ 0.41
USP42-207ENST00000521713 GNAT1P11488 350 aa17.59■□□□□ 0.41
USP42-207ENST00000521713 KIF11P52732 1056 aa17.59■□□□□ 0.41
USP42-207ENST00000521713 RESTQ13127 1097 aa17.59■□□□□ 0.41
USP42-207ENST00000521713 FAM20AQ96MK3 541 aa17.59■□□□□ 0.41
USP42-207ENST00000521713 RAB20Q9NX57 234 aa17.59■□□□□ 0.41
USP42-207ENST00000521713 ENTPD3O75355 529 aa17.58■□□□□ 0.41
USP42-207ENST00000521713 GMNNO75496 209 aa17.58■□□□□ 0.41
USP42-207ENST00000521713 MTMR1Q13613 665 aa17.58■□□□□ 0.41
USP42-207ENST00000521713 LGSNQ5TDP6 509 aa17.58■□□□□ 0.41
USP42-207ENST00000521713 ZNF512BQ96KM6 892 aaPredicted RBP17.58■□□□□ 0.41
USP42-207ENST00000521713 RABEP2Q9H5N1 569 aa17.58■□□□□ 0.41
USP42-207ENST00000521713 FAM114A2Q9NRY5 505 aa17.58■□□□□ 0.41
USP42-207ENST00000521713 CNOT7Q9UIV1 285 aaKnown RBP17.58■□□□□ 0.41
USP42-207ENST00000521713 KRT76Q01546 638 aa17.58■□□□□ 0.4
USP42-207ENST00000521713 NUF2Q9BZD4 464 aa17.58■□□□□ 0.4
USP42-207ENST00000521713 EMILIN3Q9NT22 766 aa17.58■□□□□ 0.4
USP42-207ENST00000521713 IKBKBO14920 756 aa17.58■□□□□ 0.4
USP42-207ENST00000521713 AFPP02771 609 aaKnown RBP17.58■□□□□ 0.4
USP42-207ENST00000521713 PLCG1P19174 1290 aa17.58■□□□□ 0.4
USP42-207ENST00000521713 MAN2A1Q16706 1144 aa17.58■□□□□ 0.4
USP42-207ENST00000521713 Q3C1V9 767 aa17.58■□□□□ 0.4
USP42-207ENST00000521713 LONRF3Q496Y0 759 aa17.58■□□□□ 0.4
USP42-207ENST00000521713 SDCCAG8Q86SQ7 713 aaPredicted RBP17.58■□□□□ 0.4
USP42-207ENST00000521713 TRIM50Q86XT4 487 aa17.58■□□□□ 0.4
USP42-207ENST00000521713 MICALL2Q8IY33 904 aa17.58■□□□□ 0.4
USP42-207ENST00000521713 CCDC89Q8N998 374 aa17.58■□□□□ 0.4
USP42-207ENST00000521713 AIFM3Q96NN9 605 aa17.58■□□□□ 0.4
USP42-207ENST00000521713 ACTR5Q9H9F9 607 aaPredicted RBP17.58■□□□□ 0.4
USP42-207ENST00000521713 PTPREP23469 700 aa17.58■□□□□ 0.4
USP42-207ENST00000521713 KRT81Q14533 505 aa17.58■□□□□ 0.4
USP42-207ENST00000521713 LONRF2Q1L5Z9 754 aa17.58■□□□□ 0.4
USP42-207ENST00000521713 C12orf60Q5U649 245 aa17.58■□□□□ 0.4
USP42-207ENST00000521713 MCPH1Q8NEM0 835 aa17.58■□□□□ 0.4
USP42-207ENST00000521713 ZBTB9Q96C00 473 aa17.58■□□□□ 0.4
USP42-207ENST00000521713 HAUS1Q96CS2 278 aa17.58■□□□□ 0.4
USP42-207ENST00000521713 OTUD5Q96G74 571 aa17.58■□□□□ 0.4
USP42-207ENST00000521713 WDR64B1ANS9 1081 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 SLFN12LQ6IEE8 588 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 HHIPL2Q6UWX4 724 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 KLHL7Q8IXQ5 586 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 PPP1R13BQ96KQ4 1090 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 DAGLAQ9Y4D2 1042 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 USP17L15C9J2P7 530 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 USP17L13C9JLJ4 530 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 USP17L11C9JVI0 530 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 USP17L18D6R9N7 530 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 USP17L22D6RA61 530 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 USP17L17D6RBQ6 530 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 USP17L19D6RCP7 530 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 USP17L20D6RJB6 530 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 I3L4J1 428 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 SNAP25P60880 206 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 USP17L24Q0WX57 530 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 UAP1Q16222 522 aaPredicted RBP17.57■□□□□ 0.4
USP42-207ENST00000521713 RBM46Q8TBY0 533 aaKnown RBP17.57■□□□□ 0.4
USP42-207ENST00000521713 NEK9Q8TD19 979 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 P3H4Q92791 437 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 RIMS1Q86UR5 1692 aaKnown RBP17.57■□□□□ 0.4
USP42-207ENST00000521713 EVI5O60447 810 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 LARGE1O95461 756 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 ABL1P00519 1130 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 RNASELQ05823 741 aaKnown RBP17.57■□□□□ 0.4
USP42-207ENST00000521713 SLFNL1Q499Z3 407 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 CYB5R4Q7L1T6 521 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.57■□□□□ 0.4
USP42-207ENST00000521713 Q9H521 79 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 K7ERI5 159 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 CCNE1P24864 410 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 CCT5P48643 541 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 SCYL2Q6P3W7 929 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 ACAD9Q9H845 621 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 IFT122Q9HBG6 1241 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 DISC1Q9NRI5 854 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 ODF2LQ9ULJ1 636 aa17.57■□□□□ 0.4
USP42-207ENST00000521713 IQSEC2Q5JU85 1478 aa17.56■□□□□ 0.4
USP42-207ENST00000521713 CEMIPQ8WUJ3 1361 aa17.56■□□□□ 0.4
USP42-207ENST00000521713 STX2P32856 288 aa17.56■□□□□ 0.4
USP42-207ENST00000521713 TERF2Q15554 542 aa17.56■□□□□ 0.4
USP42-207ENST00000521713 TRIM11Q96F44 468 aa17.56■□□□□ 0.4
USP42-207ENST00000521713 LY9Q9HBG7 655 aa17.56■□□□□ 0.4
USP42-207ENST00000521713 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.56■□□□□ 0.4
USP42-207ENST00000521713 ITIH3Q06033 890 aa17.56■□□□□ 0.4
USP42-207ENST00000521713 SCARF1Q14162 830 aa17.56■□□□□ 0.4
USP42-207ENST00000521713 PPP4R3CPQ6ZMV5 832 aa17.56■□□□□ 0.4
USP42-207ENST00000521713 GBP7Q8N8V2 638 aaPredicted RBP17.56■□□□□ 0.4
USP42-207ENST00000521713 TRIM4Q9C037 500 aa17.56■□□□□ 0.4
USP42-207ENST00000521713 OSBPL5Q9H0X9 879 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms