RNA–Protein interactions for RNA: ENST00000521491.1

CDH17-205, Transcript of cadherin 17, human

TSL 5

Gene CDH17, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH17-205	ENST00000521491	DOCK3	Q8IZD9	2030 aa		6.21	□□□□□ -1.42
CDH17-205	ENST00000521491	RANBP2	P49792	3224 aa	Known RBP	6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	WDR46	O15213	610 aa	Known RBP	6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	PRPF3	O43395	683 aa	Known RBP	6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	PEX10	O60683	326 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	SCG2	P13521	617 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	TAL1	P17542	331 aa	Predicted RBP	6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	SYN1	P17600	705 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	VCAM1	P19320	739 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	USP14	P54578	494 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	BACE1	P56817	501 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	RBM10	P98175	930 aa	Known RBP	6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	CDC37	Q16543	378 aa	Predicted RBP	6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	PFKFB3	Q16875	520 aa	Predicted RBP	6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	C6orf118	Q5T5N4	469 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	SYDE2	Q5VT97	1194 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	KRT40	Q6A162	431 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	WWC2	Q6AWC2	1192 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	FOXD4L3	Q6VB84	417 aa	Predicted RBP	6.2	□□□□□ -1.42
CDH17-205	ENST00000521491		Q7L0L9	218 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	HEATR3	Q7Z4Q2	680 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	FERMT3	Q86UX7	667 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	SLC9A9	Q8IVB4	645 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	C7orf61	Q8IZ16	206 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	SMCR8	Q8TEV9	937 aa	Predicted RBP	6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	SCG3	Q8WXD2	468 aa	Known RBP	6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	RRP36	Q96EU6	259 aa	Known RBP	6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	C8orf76	Q96K31	380 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	GDF15	Q99988	308 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	LZTS2	Q9BRK4	669 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	TANGO6	Q9C0B7	1094 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	RPAP3	Q9H6T3	665 aa	Predicted RBP	6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	RIOX1	Q9H6W3	641 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	JMJD4	Q9H9V9	463 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	FBXO28	Q9NVF7	368 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	VPS54	Q9P1Q0	977 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	SEC63	Q9UGP8	760 aa	Known RBP	6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	KCNJ14	Q9UNX9	436 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	MTMR6	Q9Y217	621 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	SLC45A1	Q9Y2W3	748 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	PLXNB2	O15031	1838 aa		6.2	□□□□□ -1.42
CDH17-205	ENST00000521491	MYH7B	A7E2Y1	1941 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	LCT	P09848	1927 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491		A0A1W2PPC1	479 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	KIF28P	B7ZC32	967 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	STXBP3	O00186	592 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	PPP1R11	O60927	126 aa	Predicted RBP	6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	LGR5	O75473	907 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	F13A1	P00488	732 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	ZSCAN22	P10073	491 aa	Predicted RBP	6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	BMP1	P13497	986 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	PDC	P20941	246 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	STAT2	P52630	851 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	PSMA6	P60900	246 aa	Known RBP	6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	NUCB2	P80303	420 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	TRIM29	Q14134	588 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	QRICH1	Q2TAL8	776 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	GNAS	Q5JWF2	1037 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	MCTP1	Q6DN14	999 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	PHLDB3	Q6NSJ2	640 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	TMEM214	Q6NUQ4	689 aa	Known RBP	6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	CCDC174	Q6PII3	467 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	BTNL9	Q6UXG8	535 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	NECAB2	Q7Z6G3	386 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	WASF1	Q92558	559 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	LPAR1	Q92633	364 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	TNPO1	Q92973	898 aa	Known RBP	6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	KIFC2	Q96AC6	838 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	COA7	Q96BR5	231 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	CHAMP1	Q96JM3	812 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	NAP1L5	Q96NT1	182 aa	Predicted RBP	6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	PURB	Q96QR8	312 aa	Known RBP	6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	TMOD4	Q9NZQ9	345 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	GJD2	Q9UKL4	321 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	PRR12	Q9ULL5	1215 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	AGTPBP1	Q9UPW5	1226 aa		6.19	□□□□□ -1.42
CDH17-205	ENST00000521491	PNMA6F	A0A0J9YX94	578 aa		6.18	□□□□□ -1.42
CDH17-205	ENST00000521491	C19orf81	C9J6K1	198 aa		6.18	□□□□□ -1.42
CDH17-205	ENST00000521491	ZBTB5	O15062	677 aa		6.18	□□□□□ -1.42
CDH17-205	ENST00000521491	ADAMTS3	O15072	1205 aa		6.18	□□□□□ -1.42
CDH17-205	ENST00000521491	FLOT1	O75955	427 aa		6.18	□□□□□ -1.42
CDH17-205	ENST00000521491	MMP1	P03956	469 aa		6.18	□□□□□ -1.42
CDH17-205	ENST00000521491	SMARCA1	P28370	1054 aa		6.18	□□□□□ -1.42
CDH17-205	ENST00000521491	BMP8B	P34820	402 aa		6.18	□□□□□ -1.42
CDH17-205	ENST00000521491	CTSO	P43234	321 aa	Predicted RBP	6.18	□□□□□ -1.42
CDH17-205	ENST00000521491	MAGEA10	P43363	369 aa	Predicted RBP	6.18	□□□□□ -1.42
CDH17-205	ENST00000521491	NAPA	P54920	295 aa		6.18	□□□□□ -1.42
CDH17-205	ENST00000521491	REST	Q13127	1097 aa		6.18	□□□□□ -1.42
CDH17-205	ENST00000521491	GNL2	Q13823	731 aa	Known RBP	6.18	□□□□□ -1.42
CDH17-205	ENST00000521491	FAM110C	Q1W6H9	321 aa		6.18	□□□□□ -1.42
CDH17-205	ENST00000521491	USH1G	Q495M9	461 aa		6.18	□□□□□ -1.42
CDH17-205	ENST00000521491	FAM173B	Q6P4H8	233 aa		6.18	□□□□□ -1.42
CDH17-205	ENST00000521491	TAS1R3	Q7RTX0	852 aa		6.18	□□□□□ -1.42
CDH17-205	ENST00000521491	TRIM46	Q7Z4K8	759 aa		6.18	□□□□□ -1.42
CDH17-205	ENST00000521491	FAM160B2	Q86V87	743 aa		6.18	□□□□□ -1.42
CDH17-205	ENST00000521491	DEFB123	Q8N688	67 aa		6.18	□□□□□ -1.42
CDH17-205	ENST00000521491	FBXO18	Q8NFZ0	1043 aa		6.18	□□□□□ -1.42
CDH17-205	ENST00000521491	RHBDD1	Q8TEB9	315 aa		6.18	□□□□□ -1.42

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