RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 TEX2Q8IWB9 1127 aa18.11■□□□□ 0.49
CLN8-205ENST00000520991 ZNF713Q8N859 430 aaPredicted RBP18.11■□□□□ 0.49
CLN8-205ENST00000520991 LMBR1Q8WVP7 490 aa18.11■□□□□ 0.49
CLN8-205ENST00000520991 ARNTL2Q8WYA1 636 aa18.11■□□□□ 0.49
CLN8-205ENST00000520991 SEPT1Q8WYJ6 367 aa18.11■□□□□ 0.49
CLN8-205ENST00000520991 PRDM6Q9NQX0 595 aa18.11■□□□□ 0.49
CLN8-205ENST00000520991 NRCAMQ92823 1304 aa18.1■□□□□ 0.49
CLN8-205ENST00000520991 PTPRSQ13332 1948 aa18.1■□□□□ 0.49
CLN8-205ENST00000520991 CCDC196A0A1B0GTZ2 297 aa18.1■□□□□ 0.49
CLN8-205ENST00000520991 SMCO2A6NFE2 343 aa18.1■□□□□ 0.49
CLN8-205ENST00000520991 GTPBP6O43824 516 aaPredicted RBP18.1■□□□□ 0.49
CLN8-205ENST00000520991 ARHGEF15O94989 841 aa18.1■□□□□ 0.49
CLN8-205ENST00000520991 FOSP01100 380 aaPredicted RBP18.1■□□□□ 0.49
CLN8-205ENST00000520991 CPA1P15085 419 aa18.1■□□□□ 0.49
CLN8-205ENST00000520991 MARK3P27448 753 aa18.1■□□□□ 0.49
CLN8-205ENST00000520991 CDC27P30260 824 aa18.1■□□□□ 0.49
CLN8-205ENST00000520991 APOBRQ0VD83 1088 aa18.1■□□□□ 0.49
CLN8-205ENST00000520991 BLOC1S2Q6QNY1 142 aa18.1■□□□□ 0.49
CLN8-205ENST00000520991 Q6ZUG5 572 aa18.1■□□□□ 0.49
CLN8-205ENST00000520991 DBF4BQ8NFT6 615 aa18.1■□□□□ 0.49
CLN8-205ENST00000520991 SYMPKQ92797 1274 aaKnown RBP18.1■□□□□ 0.49
CLN8-205ENST00000520991 GLG1Q92896 1179 aa18.1■□□□□ 0.49
CLN8-205ENST00000520991 PGBD1Q96JS3 809 aa18.1■□□□□ 0.49
CLN8-205ENST00000520991 GLT8D2Q9H1C3 349 aa18.1■□□□□ 0.49
CLN8-205ENST00000520991 BARHL2Q9NY43 387 aa18.1■□□□□ 0.49
CLN8-205ENST00000520991 ERAP1Q9NZ08 941 aa18.1■□□□□ 0.49
CLN8-205ENST00000520991 THEGQ9P2T0 379 aa18.1■□□□□ 0.49
CLN8-205ENST00000520991 TRANK1O15050 2925 aa18.1■□□□□ 0.49
CLN8-205ENST00000520991 RFXAPO00287 272 aa18.09■□□□□ 0.49
CLN8-205ENST00000520991 REC8O95072 547 aa18.09■□□□□ 0.49
CLN8-205ENST00000520991 GJB5O95377 273 aa18.09■□□□□ 0.49
CLN8-205ENST00000520991 HSPA4P34932 840 aa18.09■□□□□ 0.49
CLN8-205ENST00000520991 TJAP1Q5JTD0 557 aa18.09■□□□□ 0.49
CLN8-205ENST00000520991 FAM117BQ6P1L5 589 aa18.09■□□□□ 0.49
CLN8-205ENST00000520991 SEPT8Q92599 483 aa18.09■□□□□ 0.49
CLN8-205ENST00000520991 KCNB2Q92953 911 aa18.09■□□□□ 0.49
CLN8-205ENST00000520991 BRF1Q92994 677 aa18.09■□□□□ 0.49
CLN8-205ENST00000520991 RAD9AQ99638 391 aa18.09■□□□□ 0.49
CLN8-205ENST00000520991 MXRA8Q9BRK3 442 aa18.09■□□□□ 0.49
CLN8-205ENST00000520991 ANO3Q9BYT9 981 aa18.09■□□□□ 0.49
CLN8-205ENST00000520991 TSPYL2Q9H2G4 693 aaPredicted RBP18.09■□□□□ 0.49
CLN8-205ENST00000520991 JPH1Q9HDC5 661 aaPredicted RBP18.09■□□□□ 0.49
CLN8-205ENST00000520991 FAM217BQ9NTX9 383 aaPredicted RBP18.09■□□□□ 0.49
CLN8-205ENST00000520991 SNX14Q9Y5W7 946 aa18.09■□□□□ 0.49
CLN8-205ENST00000520991 GSTTP1A0A1W2PQM5 241 aa18.08■□□□□ 0.49
CLN8-205ENST00000520991 LCHNA4D1U4 455 aa18.08■□□□□ 0.49
CLN8-205ENST00000520991 EPOPA6NHQ4 379 aa18.08■□□□□ 0.49
CLN8-205ENST00000520991 AMHP03971 560 aa18.08■□□□□ 0.49
CLN8-205ENST00000520991 ADD1P35611 737 aaKnown RBP18.08■□□□□ 0.49
CLN8-205ENST00000520991 PPFIA1Q13136 1202 aa18.08■□□□□ 0.49
CLN8-205ENST00000520991 AP3B2Q13367 1082 aa18.08■□□□□ 0.49
CLN8-205ENST00000520991 PLEKHG4Q58EX7 1191 aa18.08■□□□□ 0.49
CLN8-205ENST00000520991 SDF4Q9BRK5 362 aa18.08■□□□□ 0.49
CLN8-205ENST00000520991 SMARCAD1Q9H4L7 1026 aa18.08■□□□□ 0.49
CLN8-205ENST00000520991 KCNH7Q9NS40 1196 aa18.08■□□□□ 0.49
CLN8-205ENST00000520991 SLC9A2Q9UBY0 812 aa18.08■□□□□ 0.49
CLN8-205ENST00000520991 SPTBN5Q9NRC6 3674 aaKnown RBP18.08■□□□□ 0.48
CLN8-205ENST00000520991 REV3LO60673 3130 aa18.07■□□□□ 0.48
CLN8-205ENST00000520991 RBAK-RBAKDNI3L0D1 243 aa18.07■□□□□ 0.48
CLN8-205ENST00000520991 PSMA5P28066 241 aa18.07■□□□□ 0.48
CLN8-205ENST00000520991 ZNF76P36508 570 aa18.07■□□□□ 0.48
CLN8-205ENST00000520991 ADAM17P78536 824 aa18.07■□□□□ 0.48
CLN8-205ENST00000520991 SKIV2LQ15477 1246 aaKnown RBP18.07■□□□□ 0.48
CLN8-205ENST00000520991 CEP55Q53EZ4 464 aa18.07■□□□□ 0.48
CLN8-205ENST00000520991 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.07■□□□□ 0.48
CLN8-205ENST00000520991 MYOCDQ8IZQ8 938 aa18.07■□□□□ 0.48
CLN8-205ENST00000520991 CYP2W1Q8TAV3 490 aa18.07■□□□□ 0.48
CLN8-205ENST00000520991 ATXN2LQ8WWM7 1075 aaKnown RBP18.07■□□□□ 0.48
CLN8-205ENST00000520991 TMEM260Q9NX78 707 aa18.07■□□□□ 0.48
CLN8-205ENST00000520991 NEFLP07196 543 aa18.06■□□□□ 0.48
CLN8-205ENST00000520991 SCG2P13521 617 aa18.06■□□□□ 0.48
CLN8-205ENST00000520991 RPS6KB1P23443 525 aa18.06■□□□□ 0.48
CLN8-205ENST00000520991 SREBF1P36956 1147 aa18.06■□□□□ 0.48
CLN8-205ENST00000520991 GRIK4Q16099 956 aa18.06■□□□□ 0.48
CLN8-205ENST00000520991 PFKFB3Q16875 520 aaPredicted RBP18.06■□□□□ 0.48
CLN8-205ENST00000520991 TAF2Q6P1X5 1199 aa18.06■□□□□ 0.48
CLN8-205ENST00000520991 AZI2Q9H6S1 392 aa18.06■□□□□ 0.48
CLN8-205ENST00000520991 TUBE1Q9UJT0 475 aa18.06■□□□□ 0.48
CLN8-205ENST00000520991 MTCH2Q9Y6C9 303 aa18.06■□□□□ 0.48
CLN8-205ENST00000520991 NFASCO94856 1347 aa18.06■□□□□ 0.48
CLN8-205ENST00000520991 CLK2P49760 499 aaKnown RBP18.05■□□□□ 0.48
CLN8-205ENST00000520991 IGBP1P78318 339 aa18.05■□□□□ 0.48
CLN8-205ENST00000520991 MRPS5P82675 430 aaKnown RBP18.05■□□□□ 0.48
CLN8-205ENST00000520991 AKAP17AQ02040 695 aaKnown RBP18.05■□□□□ 0.48
CLN8-205ENST00000520991 JAKMIP3Q5VZ66 844 aa18.05■□□□□ 0.48
CLN8-205ENST00000520991 RUFY4Q6ZNE9 571 aa18.05■□□□□ 0.48
CLN8-205ENST00000520991 SPRED2Q7Z698 418 aa18.05■□□□□ 0.48
CLN8-205ENST00000520991 RSPH3Q86UC2 560 aa18.05■□□□□ 0.48
CLN8-205ENST00000520991 IL27Q8NEV9 243 aa18.05■□□□□ 0.48
CLN8-205ENST00000520991 CCDC12Q8WUD4 166 aaPredicted RBP18.05■□□□□ 0.48
CLN8-205ENST00000520991 MTUS1Q9ULD2 1270 aa18.05■□□□□ 0.48
CLN8-205ENST00000520991 INSL6Q9Y581 213 aa18.05■□□□□ 0.48
CLN8-205ENST00000520991 KAT6AQ92794 2004 aa18.05■□□□□ 0.48
CLN8-205ENST00000520991 XIRP2A4UGR9 3374 aa18.05■□□□□ 0.48
CLN8-205ENST00000520991 MICAL3Q7RTP6 2002 aa18.04■□□□□ 0.48
CLN8-205ENST00000520991 ARP10275 920 aa18.04■□□□□ 0.48
CLN8-205ENST00000520991 POU3F3P20264 500 aaPredicted RBP18.04■□□□□ 0.48
CLN8-205ENST00000520991 ACTR2P61160 394 aa18.04■□□□□ 0.48
CLN8-205ENST00000520991 FAM26DQ5JW98 314 aa18.04■□□□□ 0.48
CLN8-205ENST00000520991 APBB2Q92870 758 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms