RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 TBC1D22BQ9NU19 505 aa14.01□□□□□ -0.17
CLK4-208ENST00000520957 POLR3EQ9NVU0 708 aa14.01□□□□□ -0.17
CLK4-208ENST00000520957 ELP1O95163 1332 aa14□□□□□ -0.17
CLK4-208ENST00000520957 GAS7O60861 476 aa14□□□□□ -0.17
CLK4-208ENST00000520957 ATG7O95352 703 aa14□□□□□ -0.17
CLK4-208ENST00000520957 TLE2Q04725 743 aa14□□□□□ -0.17
CLK4-208ENST00000520957 HIC1Q14526 733 aa14□□□□□ -0.17
CLK4-208ENST00000520957 C4orf32Q8N8J7 132 aa14□□□□□ -0.17
CLK4-208ENST00000520957 DPF3Q92784 378 aa14□□□□□ -0.17
CLK4-208ENST00000520957 MTMR9Q96QG7 549 aa14□□□□□ -0.17
CLK4-208ENST00000520957 RIT2Q99578 217 aa14□□□□□ -0.17
CLK4-208ENST00000520957 RNPEPQ9H4A4 650 aa14□□□□□ -0.17
CLK4-208ENST00000520957 ATP11BQ9Y2G3 1177 aa14□□□□□ -0.17
CLK4-208ENST00000520957 H3BRB1 525 aa13.99□□□□□ -0.17
CLK4-208ENST00000520957 ARVCFO00192 962 aa13.99□□□□□ -0.17
CLK4-208ENST00000520957 EML1O00423 815 aa13.99□□□□□ -0.17
CLK4-208ENST00000520957 KPNA6O60684 536 aa13.99□□□□□ -0.17
CLK4-208ENST00000520957 PQBP1O60828 265 aaKnown RBP13.99□□□□□ -0.17
CLK4-208ENST00000520957 CABYRO75952 493 aa13.99□□□□□ -0.17
CLK4-208ENST00000520957 F2P00734 622 aa13.99□□□□□ -0.17
CLK4-208ENST00000520957 MARK3P27448 753 aa13.99□□□□□ -0.17
CLK4-208ENST00000520957 PSEN2P49810 448 aa13.99□□□□□ -0.17
CLK4-208ENST00000520957 RTP1P59025 263 aa13.99□□□□□ -0.17
CLK4-208ENST00000520957 RESTQ13127 1097 aa13.99□□□□□ -0.17
CLK4-208ENST00000520957 CALCRLQ16602 461 aa13.99□□□□□ -0.17
CLK4-208ENST00000520957 KIAA0753Q2KHM9 967 aa13.99□□□□□ -0.17
CLK4-208ENST00000520957 SWSAP1Q6NVH7 229 aa13.99□□□□□ -0.17
CLK4-208ENST00000520957 B3GNT9Q6UX72 402 aa13.99□□□□□ -0.17
CLK4-208ENST00000520957 SLC43A3Q8NBI5 491 aa13.99□□□□□ -0.17
CLK4-208ENST00000520957 TRPV6Q9H1D0 765 aa13.99□□□□□ -0.17
CLK4-208ENST00000520957 TUT1Q9H6E5 874 aaKnown RBP13.99□□□□□ -0.17
CLK4-208ENST00000520957 VAV3Q9UKW4 847 aa13.99□□□□□ -0.17
CLK4-208ENST00000520957 A0A0U1RQG5 324 aaPredicted RBP13.98□□□□□ -0.17
CLK4-208ENST00000520957 HAS3O00219 553 aa13.98□□□□□ -0.17
CLK4-208ENST00000520957 MARCH6O60337 910 aa13.98□□□□□ -0.17
CLK4-208ENST00000520957 NEMFO60524 1076 aa13.98□□□□□ -0.17
CLK4-208ENST00000520957 TXKP42681 527 aa13.98□□□□□ -0.17
CLK4-208ENST00000520957 ZNF200P98182 395 aaPredicted RBP13.98□□□□□ -0.17
CLK4-208ENST00000520957 BECN1Q14457 450 aa13.98□□□□□ -0.17
CLK4-208ENST00000520957 MFSD10Q14728 455 aa13.98□□□□□ -0.17
CLK4-208ENST00000520957 SNX17Q15036 470 aa13.98□□□□□ -0.17
CLK4-208ENST00000520957 TRMT1LQ7Z2T5 733 aaKnown RBP13.98□□□□□ -0.17
CLK4-208ENST00000520957 CCDC60Q8IWA6 550 aaPredicted RBP13.98□□□□□ -0.17
CLK4-208ENST00000520957 GLG1Q92896 1179 aa13.98□□□□□ -0.17
CLK4-208ENST00000520957 FAM20AQ96MK3 541 aa13.98□□□□□ -0.17
CLK4-208ENST00000520957 TEKT3Q9BXF9 490 aa13.98□□□□□ -0.17
CLK4-208ENST00000520957 FTOQ9C0B1 505 aaKnown RBP eCLIP13.98□□□□□ -0.17
CLK4-208ENST00000520957 TRMT13Q9NUP7 481 aaKnown RBP13.98□□□□□ -0.17
CLK4-208ENST00000520957 HDAC6Q9UBN7 1215 aa13.98□□□□□ -0.17
CLK4-208ENST00000520957 SAMM50Q9Y512 469 aa13.98□□□□□ -0.17
CLK4-208ENST00000520957 FRMPD3Q5JV73 1810 aa13.98□□□□□ -0.17
CLK4-208ENST00000520957 IGKV6D-21A0A0A0MT36 114 aa13.98□□□□□ -0.17
CLK4-208ENST00000520957 SUPT20HL2P0C7V6 817 aa13.98□□□□□ -0.17
CLK4-208ENST00000520957 ATP4AP20648 1035 aa13.98□□□□□ -0.17
CLK4-208ENST00000520957 TRAPPC10P48553 1259 aa13.98□□□□□ -0.17
CLK4-208ENST00000520957 RANBP2P49792 3224 aaKnown RBP13.98□□□□□ -0.17
CLK4-208ENST00000520957 MLLT1Q03111 559 aaPredicted RBP13.98□□□□□ -0.17
CLK4-208ENST00000520957 SPIRE1Q08AE8 756 aa13.98□□□□□ -0.17
CLK4-208ENST00000520957 PTGDRQ13258 359 aa13.98□□□□□ -0.17
CLK4-208ENST00000520957 FOXD4L6Q3SYB3 417 aaPredicted RBP13.98□□□□□ -0.17
CLK4-208ENST00000520957 FAM47CQ5HY64 1035 aa13.98□□□□□ -0.17
CLK4-208ENST00000520957 ZNF746Q6NUN9 644 aaPredicted RBP13.98□□□□□ -0.17
CLK4-208ENST00000520957 FOXD4L3Q6VB84 417 aaPredicted RBP13.98□□□□□ -0.17
CLK4-208ENST00000520957 SH3RF1Q7Z6J0 888 aa13.98□□□□□ -0.17
CLK4-208ENST00000520957 NAP1L4Q99733 375 aaKnown RBP13.98□□□□□ -0.17
CLK4-208ENST00000520957 DISC1Q9NRI5 854 aa13.98□□□□□ -0.17
CLK4-208ENST00000520957 NOL7Q9UMY1 257 aaKnown RBP13.98□□□□□ -0.17
CLK4-208ENST00000520957 ZDHHC9Q9Y397 364 aa13.98□□□□□ -0.17
CLK4-208ENST00000520957 PCDHA10Q9Y5I2 948 aa13.98□□□□□ -0.17
CLK4-208ENST00000520957 TBX3O15119 743 aa13.97□□□□□ -0.17
CLK4-208ENST00000520957 EVI5O60447 810 aa13.97□□□□□ -0.17
CLK4-208ENST00000520957 LGR5O75473 907 aa13.97□□□□□ -0.17
CLK4-208ENST00000520957 STAT5BP51692 787 aa13.97□□□□□ -0.17
CLK4-208ENST00000520957 KRT76Q01546 638 aa13.97□□□□□ -0.17
CLK4-208ENST00000520957 FAAP100Q0VG06 881 aa13.97□□□□□ -0.17
CLK4-208ENST00000520957 IL17AQ16552 155 aa13.97□□□□□ -0.17
CLK4-208ENST00000520957 UGCGQ16739 394 aa13.97□□□□□ -0.17
CLK4-208ENST00000520957 RILPL1Q5EBL4 403 aa13.97□□□□□ -0.17
CLK4-208ENST00000520957 C1orf53Q5VUE5 145 aa13.97□□□□□ -0.17
CLK4-208ENST00000520957 C7orf61Q8IZ16 206 aa13.97□□□□□ -0.17
CLK4-208ENST00000520957 ZBTB10Q96DT7 871 aa13.97□□□□□ -0.17
CLK4-208ENST00000520957 CTAGE1Q96RT6 745 aa13.97□□□□□ -0.17
CLK4-208ENST00000520957 HTATIP2Q9BUP3 242 aa13.97□□□□□ -0.17
CLK4-208ENST00000520957 TTC12Q9H892 705 aaPredicted RBP13.97□□□□□ -0.17
CLK4-208ENST00000520957 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.97□□□□□ -0.17
CLK4-208ENST00000520957 PCDHA12Q9UN75 941 aa13.97□□□□□ -0.17
CLK4-208ENST00000520957 BACH1O14867 736 aa13.96□□□□□ -0.17
CLK4-208ENST00000520957 B4GALT4O60513 344 aa13.96□□□□□ -0.17
CLK4-208ENST00000520957 SYN1P17600 705 aa13.96□□□□□ -0.17
CLK4-208ENST00000520957 GDF6Q6KF10 455 aaPredicted RBP13.96□□□□□ -0.17
CLK4-208ENST00000520957 MIS18BP1Q6P0N0 1132 aa13.96□□□□□ -0.17
CLK4-208ENST00000520957 ANKRD33Q7Z3H0 272 aa13.96□□□□□ -0.17
CLK4-208ENST00000520957 FAM126BQ8IXS8 530 aa13.96□□□□□ -0.17
CLK4-208ENST00000520957 CHAMP1Q96JM3 812 aa13.96□□□□□ -0.17
CLK4-208ENST00000520957 SMARCAD1Q9H4L7 1026 aa13.96□□□□□ -0.17
CLK4-208ENST00000520957 SETD4Q9NVD3 440 aa13.96□□□□□ -0.17
CLK4-208ENST00000520957 GABBR1Q9UBS5 961 aa13.96□□□□□ -0.17
CLK4-208ENST00000520957 DOCK5Q9H7D0 1870 aa13.96□□□□□ -0.17
CLK4-208ENST00000520957 CEP290O15078 2479 aa13.96□□□□□ -0.18
CLK4-208ENST00000520957 TRIM43BA6NCK2 446 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms