RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 IRS1P35568 1242 aa13.26□□□□□ -0.29
MRPS28-206ENST00000520946 PPFIA1Q13136 1202 aa13.26□□□□□ -0.29
MRPS28-206ENST00000520946 MKRN4PQ13434 485 aaPredicted RBP13.26□□□□□ -0.29
MRPS28-206ENST00000520946 SMAD2Q15796 467 aaKnown RBP13.26□□□□□ -0.29
MRPS28-206ENST00000520946 FAM26DQ5JW98 314 aa13.26□□□□□ -0.29
MRPS28-206ENST00000520946 POTEBQ6S5H4 581 aa13.26□□□□□ -0.29
MRPS28-206ENST00000520946 CHD1LQ86WJ1 897 aa13.26□□□□□ -0.29
MRPS28-206ENST00000520946 TRIM50Q86XT4 487 aa13.26□□□□□ -0.29
MRPS28-206ENST00000520946 ADGRA3Q8IWK6 1321 aa13.26□□□□□ -0.29
MRPS28-206ENST00000520946 LMBR1Q8WVP7 490 aa13.26□□□□□ -0.29
MRPS28-206ENST00000520946 MTMR8Q96EF0 704 aa13.26□□□□□ -0.29
MRPS28-206ENST00000520946 SEC63Q9UGP8 760 aaKnown RBP13.26□□□□□ -0.29
MRPS28-206ENST00000520946 MUTYHQ9UIF7 546 aa13.26□□□□□ -0.29
MRPS28-206ENST00000520946 TRANK1O15050 2925 aa13.25□□□□□ -0.29
MRPS28-206ENST00000520946 C5orf67F2Z3F1 127 aa13.25□□□□□ -0.29
MRPS28-206ENST00000520946 GRM6O15303 877 aa13.25□□□□□ -0.29
MRPS28-206ENST00000520946 MBTPS2O43462 519 aa13.25□□□□□ -0.29
MRPS28-206ENST00000520946 IBSPP21815 317 aaPredicted RBP13.25□□□□□ -0.29
MRPS28-206ENST00000520946 MARK3P27448 753 aa13.25□□□□□ -0.29
MRPS28-206ENST00000520946 HOXC8P31273 242 aa13.25□□□□□ -0.29
MRPS28-206ENST00000520946 HYAL1Q12794 435 aa13.25□□□□□ -0.29
MRPS28-206ENST00000520946 SMAD4Q13485 552 aaKnown RBP13.25□□□□□ -0.29
MRPS28-206ENST00000520946 GRM4Q14833 912 aa13.25□□□□□ -0.29
MRPS28-206ENST00000520946 WTAPQ15007 396 aa13.25□□□□□ -0.29
MRPS28-206ENST00000520946 HFE2Q6ZVN8 426 aa13.25□□□□□ -0.29
MRPS28-206ENST00000520946 RNF135Q8IUD6 432 aa13.25□□□□□ -0.29
MRPS28-206ENST00000520946 SUGP1Q8IWZ8 645 aaKnown RBP13.25□□□□□ -0.29
MRPS28-206ENST00000520946 MICAL1Q8TDZ2 1067 aa13.25□□□□□ -0.29
MRPS28-206ENST00000520946 TNPO1Q92973 898 aaKnown RBP13.25□□□□□ -0.29
MRPS28-206ENST00000520946 RRP36Q96EU6 259 aaKnown RBP13.25□□□□□ -0.29
MRPS28-206ENST00000520946 CDHR1Q96JP9 859 aa13.25□□□□□ -0.29
MRPS28-206ENST00000520946 INPP4AQ96PE3 977 aaPredicted RBP13.25□□□□□ -0.29
MRPS28-206ENST00000520946 PLVAPQ9BX97 442 aa13.25□□□□□ -0.29
MRPS28-206ENST00000520946 BCAS3Q9H6U6 928 aa13.25□□□□□ -0.29
MRPS28-206ENST00000520946 RIOX1Q9H6W3 641 aa13.25□□□□□ -0.29
MRPS28-206ENST00000520946 ALG13Q9NP73 1137 aaKnown RBP13.25□□□□□ -0.29
MRPS28-206ENST00000520946 LRFN2Q9ULH4 789 aa13.25□□□□□ -0.29
MRPS28-206ENST00000520946 U3KPZ7 1027 aaPredicted RBP13.25□□□□□ -0.29
MRPS28-206ENST00000520946 C19orf67A6NJJ6 358 aa13.24□□□□□ -0.29
MRPS28-206ENST00000520946 ENPP3O14638 875 aa13.24□□□□□ -0.29
MRPS28-206ENST00000520946 CHRNA1P02708 482 aa13.24□□□□□ -0.29
MRPS28-206ENST00000520946 RPLP2P05387 115 aaKnown RBP13.24□□□□□ -0.29
MRPS28-206ENST00000520946 STAG3L1P0CL83 205 aa13.24□□□□□ -0.29
MRPS28-206ENST00000520946 TCF7P36402 384 aaPredicted RBP13.24□□□□□ -0.29
MRPS28-206ENST00000520946 IGBP1P78318 339 aa13.24□□□□□ -0.29
MRPS28-206ENST00000520946 MRPS9P82933 396 aaKnown RBP13.24□□□□□ -0.29
MRPS28-206ENST00000520946 SEC23AQ15436 765 aa13.24□□□□□ -0.29
MRPS28-206ENST00000520946 SPOUT1Q5T280 376 aaKnown RBP13.24□□□□□ -0.29
MRPS28-206ENST00000520946 IER5Q5VY09 327 aa13.24□□□□□ -0.29
MRPS28-206ENST00000520946 XRRA1Q6P2D8 792 aa13.24□□□□□ -0.29
MRPS28-206ENST00000520946 CYB5R4Q7L1T6 521 aa13.24□□□□□ -0.29
MRPS28-206ENST00000520946 PLEKHM2Q8IWE5 1019 aa13.24□□□□□ -0.29
MRPS28-206ENST00000520946 DNAJB3Q8WWF6 145 aa13.24□□□□□ -0.29
MRPS28-206ENST00000520946 SEPT1Q8WYJ6 367 aa13.24□□□□□ -0.29
MRPS28-206ENST00000520946 PBXIP1Q96AQ6 731 aa13.24□□□□□ -0.29
MRPS28-206ENST00000520946 SENP7Q9BQF6 1050 aa13.24□□□□□ -0.29
MRPS28-206ENST00000520946 OSBPL7Q9BZF2 842 aa13.24□□□□□ -0.29
MRPS28-206ENST00000520946 ERAP1Q9NZ08 941 aa13.24□□□□□ -0.29
MRPS28-206ENST00000520946 TUBE1Q9UJT0 475 aa13.24□□□□□ -0.29
MRPS28-206ENST00000520946 KAT6AQ92794 2004 aa13.23□□□□□ -0.29
MRPS28-206ENST00000520946 XIRP2A4UGR9 3374 aa13.23□□□□□ -0.29
MRPS28-206ENST00000520946 KIF5BP33176 963 aa13.23□□□□□ -0.29
MRPS28-206ENST00000520946 LTBRP36941 435 aa13.23□□□□□ -0.29
MRPS28-206ENST00000520946 AAMPQ13685 434 aa13.23□□□□□ -0.29
MRPS28-206ENST00000520946 GRIK4Q16099 956 aa13.23□□□□□ -0.29
MRPS28-206ENST00000520946 PKN1Q16512 942 aa13.23□□□□□ -0.29
MRPS28-206ENST00000520946 PCNX4Q63HM2 1172 aa13.23□□□□□ -0.29
MRPS28-206ENST00000520946 RUFY4Q6ZNE9 571 aa13.23□□□□□ -0.29
MRPS28-206ENST00000520946 TSHZ1Q6ZSZ6 1077 aa13.23□□□□□ -0.29
MRPS28-206ENST00000520946 NCOA7Q8NI08 942 aa13.23□□□□□ -0.29
MRPS28-206ENST00000520946 CTCFLQ8NI51 663 aaPredicted RBP13.23□□□□□ -0.29
MRPS28-206ENST00000520946 RUFY2Q8WXA3 655 aa13.23□□□□□ -0.29
MRPS28-206ENST00000520946 FTHL17Q9BXU8 183 aa13.23□□□□□ -0.29
MRPS28-206ENST00000520946 FAM49AQ9H0Q0 323 aaPredicted RBP13.23□□□□□ -0.29
MRPS28-206ENST00000520946 SMARCAD1Q9H4L7 1026 aa13.23□□□□□ -0.29
MRPS28-206ENST00000520946 AZI2Q9H6S1 392 aa13.23□□□□□ -0.29
MRPS28-206ENST00000520946 PKD2L1Q9P0L9 805 aa13.23□□□□□ -0.29
MRPS28-206ENST00000520946 PLAGL2Q9UPG8 496 aa13.23□□□□□ -0.29
MRPS28-206ENST00000520946 SUPT16HQ9Y5B9 1047 aaKnown RBP13.23□□□□□ -0.29
MRPS28-206ENST00000520946 CDY2AQ9Y6F7 541 aa13.23□□□□□ -0.29
MRPS28-206ENST00000520946 REV3LO60673 3130 aa13.22□□□□□ -0.29
MRPS28-206ENST00000520946 PPFIA3O75145 1194 aa13.22□□□□□ -0.29
MRPS28-206ENST00000520946 MMP1P03956 469 aa13.22□□□□□ -0.29
MRPS28-206ENST00000520946 GTF2F1P35269 517 aaKnown RBP eCLIP13.22□□□□□ -0.29
MRPS28-206ENST00000520946 DLX2Q07687 328 aaPredicted RBP13.22□□□□□ -0.29
MRPS28-206ENST00000520946 LPIN1Q14693 890 aa13.22□□□□□ -0.29
MRPS28-206ENST00000520946 COL19A1Q14993 1142 aa13.22□□□□□ -0.29
MRPS28-206ENST00000520946 CTC1Q2NKJ3 1217 aa13.22□□□□□ -0.29
MRPS28-206ENST00000520946 PAN2Q504Q3 1202 aaKnown RBP13.22□□□□□ -0.29
MRPS28-206ENST00000520946 NAALADL2Q58DX5 795 aa13.22□□□□□ -0.29
MRPS28-206ENST00000520946 HERC4Q5GLZ8 1057 aaPredicted RBP13.22□□□□□ -0.29
MRPS28-206ENST00000520946 USP17L6PQ6QN14 398 aa13.22□□□□□ -0.29
MRPS28-206ENST00000520946 RBM23Q86U06 439 aaKnown RBP13.22□□□□□ -0.29
MRPS28-206ENST00000520946 EDAQ92838 391 aa13.22□□□□□ -0.29
MRPS28-206ENST00000520946 CLP1Q92989 425 aaKnown RBP13.22□□□□□ -0.29
MRPS28-206ENST00000520946 PRRX2Q99811 253 aa13.22□□□□□ -0.29
MRPS28-206ENST00000520946 OSBPL3Q9H4L5 887 aa13.22□□□□□ -0.29
MRPS28-206ENST00000520946 EHMT1Q9H9B1 1298 aa13.22□□□□□ -0.29
MRPS28-206ENST00000520946 TRPC6Q9Y210 931 aa13.22□□□□□ -0.29
MRPS28-206ENST00000520946 NLRC5Q86WI3 1866 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms