RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 UTP14CQ5TAP6 766 aaKnown RBP12.29□□□□□ -0.44
PVT1-209ENST00000520913 TYW1BQ6NUM6 668 aa12.29□□□□□ -0.44
PVT1-209ENST00000520913 TRAF7Q6Q0C0 670 aa12.29□□□□□ -0.44
PVT1-209ENST00000520913 Q6ZUG5 572 aa12.29□□□□□ -0.44
PVT1-209ENST00000520913 HERC6Q8IVU3 1022 aa12.29□□□□□ -0.44
PVT1-209ENST00000520913 BRF1Q92994 677 aa12.29□□□□□ -0.44
PVT1-209ENST00000520913 ANO3Q9BYT9 981 aa12.29□□□□□ -0.44
PVT1-209ENST00000520913 RNPEPQ9H4A4 650 aa12.29□□□□□ -0.44
PVT1-209ENST00000520913 ATG2AQ2TAZ0 1938 aa12.29□□□□□ -0.44
PVT1-209ENST00000520913 EVPLQ92817 2033 aa12.28□□□□□ -0.44
PVT1-209ENST00000520913 ABHD14A-ACY1A0A1B0GW23 586 aa12.28□□□□□ -0.44
PVT1-209ENST00000520913 TREHO43280 583 aa12.28□□□□□ -0.44
PVT1-209ENST00000520913 ATP9AO75110 1047 aa12.28□□□□□ -0.44
PVT1-209ENST00000520913 LGR5O75473 907 aa12.28□□□□□ -0.44
PVT1-209ENST00000520913 RPS6KB1P23443 525 aa12.28□□□□□ -0.44
PVT1-209ENST00000520913 PSMA5P28066 241 aa12.28□□□□□ -0.44
PVT1-209ENST00000520913 THPOP40225 353 aa12.28□□□□□ -0.44
PVT1-209ENST00000520913 MBTPS1Q14703 1052 aa12.28□□□□□ -0.44
PVT1-209ENST00000520913 PFKFB3Q16875 520 aaPredicted RBP12.28□□□□□ -0.44
PVT1-209ENST00000520913 FBXL16Q8N461 479 aa12.28□□□□□ -0.44
PVT1-209ENST00000520913 CCDC12Q8WUD4 166 aaPredicted RBP12.28□□□□□ -0.44
PVT1-209ENST00000520913 LMBR1Q8WVP7 490 aa12.28□□□□□ -0.44
PVT1-209ENST00000520913 SEPT1Q8WYJ6 367 aa12.28□□□□□ -0.44
PVT1-209ENST00000520913 AGXT2Q9BYV1 514 aa12.28□□□□□ -0.44
PVT1-209ENST00000520913 JADE2Q9NQC1 790 aa12.28□□□□□ -0.44
PVT1-209ENST00000520913 FAM217BQ9NTX9 383 aaPredicted RBP12.28□□□□□ -0.44
PVT1-209ENST00000520913 PKD2L1Q9P0L9 805 aa12.28□□□□□ -0.44
PVT1-209ENST00000520913 TELO2Q9Y4R8 837 aa12.28□□□□□ -0.44
PVT1-209ENST00000520913 V9GY48 417 aaPredicted RBP12.28□□□□□ -0.44
PVT1-209ENST00000520913 SMCO2A6NFE2 343 aa12.27□□□□□ -0.45
PVT1-209ENST00000520913 RSPH10B2B2RC85 870 aa12.27□□□□□ -0.45
PVT1-209ENST00000520913 TLL1O43897 1013 aa12.27□□□□□ -0.45
PVT1-209ENST00000520913 RSPH10BP0C881 870 aa12.27□□□□□ -0.45
PVT1-209ENST00000520913 SCG2P13521 617 aa12.27□□□□□ -0.45
PVT1-209ENST00000520913 ADD1P35611 737 aaKnown RBP12.27□□□□□ -0.45
PVT1-209ENST00000520913 SREBF1P36956 1147 aa12.27□□□□□ -0.45
PVT1-209ENST00000520913 CLK2P49760 499 aaKnown RBP12.27□□□□□ -0.45
PVT1-209ENST00000520913 DEFB103AP81534 67 aa12.27□□□□□ -0.45
PVT1-209ENST00000520913 ARHGAP4P98171 946 aa12.27□□□□□ -0.45
PVT1-209ENST00000520913 IKBKEQ14164 716 aa12.27□□□□□ -0.45
PVT1-209ENST00000520913 USP38Q8NB14 1042 aa12.27□□□□□ -0.45
PVT1-209ENST00000520913 PGBD1Q96JS3 809 aa12.27□□□□□ -0.45
PVT1-209ENST00000520913 MXRA8Q9BRK3 442 aa12.27□□□□□ -0.45
PVT1-209ENST00000520913 JPH1Q9HDC5 661 aaPredicted RBP12.27□□□□□ -0.45
PVT1-209ENST00000520913 SETD4Q9NVD3 440 aa12.27□□□□□ -0.45
PVT1-209ENST00000520913 ERAP1Q9NZ08 941 aa12.27□□□□□ -0.45
PVT1-209ENST00000520913 SLC9A2Q9UBY0 812 aa12.27□□□□□ -0.45
PVT1-209ENST00000520913 NFASCO94856 1347 aa12.27□□□□□ -0.45
PVT1-209ENST00000520913 NRCAMQ92823 1304 aa12.27□□□□□ -0.45
PVT1-209ENST00000520913 GSTTP1A0A1W2PQM5 241 aa12.26□□□□□ -0.45
PVT1-209ENST00000520913 ESYT2A0FGR8 921 aa12.26□□□□□ -0.45
PVT1-209ENST00000520913 CTSHP09668 335 aa12.26□□□□□ -0.45
PVT1-209ENST00000520913 IGFBP4P22692 258 aa12.26□□□□□ -0.45
PVT1-209ENST00000520913 ADAM17P78536 824 aa12.26□□□□□ -0.45
PVT1-209ENST00000520913 PPFIA1Q13136 1202 aa12.26□□□□□ -0.45
PVT1-209ENST00000520913 ADGRE1Q14246 886 aa12.26□□□□□ -0.45
PVT1-209ENST00000520913 TCTN1Q2MV58 587 aa12.26□□□□□ -0.45
PVT1-209ENST00000520913 CEP55Q53EZ4 464 aa12.26□□□□□ -0.45
PVT1-209ENST00000520913 MCTP2Q6DN12 878 aa12.26□□□□□ -0.45
PVT1-209ENST00000520913 GLG1Q92896 1179 aa12.26□□□□□ -0.45
PVT1-209ENST00000520913 SDF4Q9BRK5 362 aa12.26□□□□□ -0.45
PVT1-209ENST00000520913 ZBED2Q9BTP6 218 aa12.26□□□□□ -0.45
PVT1-209ENST00000520913 SMARCAD1Q9H4L7 1026 aa12.26□□□□□ -0.45
PVT1-209ENST00000520913 KCNH7Q9NS40 1196 aa12.26□□□□□ -0.45
PVT1-209ENST00000520913 GJB5O95377 273 aa12.25□□□□□ -0.45
PVT1-209ENST00000520913 MARK3P27448 753 aa12.25□□□□□ -0.45
PVT1-209ENST00000520913 AKAP17AQ02040 695 aaKnown RBP12.25□□□□□ -0.45
PVT1-209ENST00000520913 TAP1Q03518 808 aa12.25□□□□□ -0.45
PVT1-209ENST00000520913 PLEKHG4Q58EX7 1191 aa12.25□□□□□ -0.45
PVT1-209ENST00000520913 TAF2Q6P1X5 1199 aa12.25□□□□□ -0.45
PVT1-209ENST00000520913 NIPA1Q7RTP0 329 aa12.25□□□□□ -0.45
PVT1-209ENST00000520913 REXO1Q8N1G1 1221 aaKnown RBP12.25□□□□□ -0.45
PVT1-209ENST00000520913 CCDC148Q8NFR7 591 aa12.25□□□□□ -0.45
PVT1-209ENST00000520913 PPM1EQ8WY54 764 aa12.25□□□□□ -0.45
PVT1-209ENST00000520913 COL25A1Q9BXS0 654 aaPredicted RBP12.25□□□□□ -0.45
PVT1-209ENST00000520913 RNF26Q9BY78 433 aaPredicted RBP12.25□□□□□ -0.45
PVT1-209ENST00000520913 ZMYND12Q9H0C1 365 aa12.25□□□□□ -0.45
PVT1-209ENST00000520913 AZI2Q9H6S1 392 aa12.25□□□□□ -0.45
PVT1-209ENST00000520913 C6orf50Q9HD87 102 aa12.25□□□□□ -0.45
PVT1-209ENST00000520913 TMEM260Q9NX78 707 aa12.25□□□□□ -0.45
PVT1-209ENST00000520913 THEGQ9P2T0 379 aa12.25□□□□□ -0.45
PVT1-209ENST00000520913 TUBE1Q9UJT0 475 aa12.25□□□□□ -0.45
PVT1-209ENST00000520913 MUC3AQ02505 3323 aa12.25□□□□□ -0.45
PVT1-209ENST00000520913 PRRC2BQ5JSZ5 2229 aaKnown RBP12.25□□□□□ -0.45
PVT1-209ENST00000520913 PRPF3O43395 683 aaKnown RBP12.24□□□□□ -0.45
PVT1-209ENST00000520913 GTPBP6O43824 516 aaPredicted RBP12.24□□□□□ -0.45
PVT1-209ENST00000520913 ARHGEF15O94989 841 aa12.24□□□□□ -0.45
PVT1-209ENST00000520913 AMHP03971 560 aa12.24□□□□□ -0.45
PVT1-209ENST00000520913 RPLP2P05387 115 aaKnown RBP12.24□□□□□ -0.45
PVT1-209ENST00000520913 ZNF76P36508 570 aa12.24□□□□□ -0.45
PVT1-209ENST00000520913 SETQ01105 290 aaPredicted RBP12.24□□□□□ -0.45
PVT1-209ENST00000520913 GRIK4Q16099 956 aa12.24□□□□□ -0.45
PVT1-209ENST00000520913 RUFY3Q7L099 469 aa12.24□□□□□ -0.45
PVT1-209ENST00000520913 TMCO2Q7Z6W1 182 aaPredicted RBP12.24□□□□□ -0.45
PVT1-209ENST00000520913 RPAINQ86UA6 219 aa12.24□□□□□ -0.45
PVT1-209ENST00000520913 RSPH3Q86UC2 560 aa12.24□□□□□ -0.45
PVT1-209ENST00000520913 DBF4BQ8NFT6 615 aa12.24□□□□□ -0.45
PVT1-209ENST00000520913 ARNTL2Q8WYA1 636 aa12.24□□□□□ -0.45
PVT1-209ENST00000520913 SEPT8Q92599 483 aa12.24□□□□□ -0.45
PVT1-209ENST00000520913 APBB2Q92870 758 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms