RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 AK2P54819 239 aa9.54□□□□□ -0.88
SHPRH-208ENST00000520752 FANCCQ00597 558 aa9.54□□□□□ -0.88
SHPRH-208ENST00000520752 FAM160A1Q05DH4 1040 aa9.54□□□□□ -0.88
SHPRH-208ENST00000520752 ANKRD1Q15327 319 aa9.54□□□□□ -0.88
SHPRH-208ENST00000520752 IFI16Q16666 785 aaKnown RBP9.54□□□□□ -0.88
SHPRH-208ENST00000520752 PABPC1LQ4VXU2 614 aaKnown RBP9.54□□□□□ -0.88
SHPRH-208ENST00000520752 CRELD1Q96HD1 420 aa9.54□□□□□ -0.88
SHPRH-208ENST00000520752 NAP1L3Q99457 506 aaPredicted RBP9.54□□□□□ -0.88
SHPRH-208ENST00000520752 YIPF2Q9BWQ6 316 aa9.54□□□□□ -0.88
SHPRH-208ENST00000520752 CLEC4MQ9H2X3 399 aaPredicted RBP9.54□□□□□ -0.88
SHPRH-208ENST00000520752 ZNF576Q9H609 170 aa9.54□□□□□ -0.88
SHPRH-208ENST00000520752 DMAP1Q9NPF5 467 aaPredicted RBP9.54□□□□□ -0.88
SHPRH-208ENST00000520752 SLC5A4Q9NY91 659 aa9.54□□□□□ -0.88
SHPRH-208ENST00000520752 STAP2Q9UGK3 403 aa9.54□□□□□ -0.88
SHPRH-208ENST00000520752 MKL2Q9ULH7 1088 aa9.54□□□□□ -0.88
SHPRH-208ENST00000520752 PPM1HQ9ULR3 514 aa9.54□□□□□ -0.88
SHPRH-208ENST00000520752 RRP7AQ9Y3A4 280 aaKnown RBP9.54□□□□□ -0.88
SHPRH-208ENST00000520752 KIAA0232Q92628 1395 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 VPS37CA5D8V6 355 aaPredicted RBP9.53□□□□□ -0.88
SHPRH-208ENST00000520752 AGPSO00116 658 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 GNB5O14775 395 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 ATP6V1G1O75348 118 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 TMCC1O94876 653 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 ANP32DO95626 131 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 EPHA1P21709 976 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 LSP1P33241 339 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 TMPOP42166 694 aaKnown RBP9.53□□□□□ -0.88
SHPRH-208ENST00000520752 CTCFP49711 727 aaPredicted RBP9.53□□□□□ -0.88
SHPRH-208ENST00000520752 CABP4P57796 275 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 NLRP12P59046 1061 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 PHEXP78562 749 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 MXRA7P84157 204 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 CCDC15Q0P6D6 951 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 MYO1EQ12965 1108 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 TBX2Q13207 712 aaPredicted RBP9.53□□□□□ -0.88
SHPRH-208ENST00000520752 MPP3Q13368 585 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 CUL4BQ13620 913 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 E2F5Q15329 346 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 PTGISQ16647 500 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 GLE1Q53GS7 698 aaKnown RBP9.53□□□□□ -0.88
SHPRH-208ENST00000520752 ANKRD20A8PQ5CZ79 823 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 SPECC1Q5M775 1068 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 ZNF280DQ6N043 979 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 RUFY3Q7L099 469 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 CACNA2D4Q7Z3S7 1137 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 NLRP14Q86W24 1093 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 TMEM139Q8IV31 216 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 IQCF2Q8IXL9 164 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 LRRC43Q8N309 656 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 CXorf38Q8TB03 319 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 WDR66Q8TBY9 1149 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 TEKT4Q8WW24 435 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 MAIP1Q8WWC4 291 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 RSPH1Q8WYR4 309 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 OPTNQ96CV9 577 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 FAM81BQ96LP2 452 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 NAPGQ99747 312 aaPredicted RBP9.53□□□□□ -0.88
SHPRH-208ENST00000520752 CCDC28BQ9BUN5 200 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 NUP58Q9BVL2 599 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 FAM192AQ9GZU8 254 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 GOLPH3LQ9H4A5 285 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 NRDE2Q9H7Z3 1164 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 RTEL1Q9NZ71 1219 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 RCOR1Q9UKL0 485 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 FAM184BQ9ULE4 1060 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 PAIP2BQ9ULR5 123 aaKnown RBP9.53□□□□□ -0.88
SHPRH-208ENST00000520752 TTF2Q9UNY4 1162 aaKnown RBP9.53□□□□□ -0.88
SHPRH-208ENST00000520752 ZNF148Q9UQR1 794 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 FRMD4BQ9Y2L6 1034 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 TMED5Q9Y3A6 229 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 SAMM50Q9Y512 469 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 NPHP4O75161 1426 aaPredicted RBP9.53□□□□□ -0.88
SHPRH-208ENST00000520752 CDK12Q9NYV4 1490 aaPredicted RBP9.53□□□□□ -0.88
SHPRH-208ENST00000520752 MADDQ8WXG6 1647 aa9.53□□□□□ -0.88
SHPRH-208ENST00000520752 USP31Q70CQ4 1352 aa9.52□□□□□ -0.88
SHPRH-208ENST00000520752 CEMIPQ8WUJ3 1361 aa9.52□□□□□ -0.88
SHPRH-208ENST00000520752 C5orf60A6NFR6 353 aa9.52□□□□□ -0.89
SHPRH-208ENST00000520752 H3BRJ5 948 aa9.52□□□□□ -0.89
SHPRH-208ENST00000520752 FLOT1O75955 427 aa9.52□□□□□ -0.89
SHPRH-208ENST00000520752 NAT1P18440 290 aa9.52□□□□□ -0.89
SHPRH-208ENST00000520752 GNAQP50148 359 aa9.52□□□□□ -0.89
SHPRH-208ENST00000520752 ELF3P78545 371 aaPredicted RBP9.52□□□□□ -0.89
SHPRH-208ENST00000520752 NEXNQ0ZGT2 675 aa9.52□□□□□ -0.89
SHPRH-208ENST00000520752 KIF5AQ12840 1032 aa9.52□□□□□ -0.89
SHPRH-208ENST00000520752 CLPPQ16740 277 aaPredicted RBP9.52□□□□□ -0.89
SHPRH-208ENST00000520752 GJC2Q5T442 439 aaPredicted RBP9.52□□□□□ -0.89
SHPRH-208ENST00000520752 LDLRAD1Q5T700 205 aa9.52□□□□□ -0.89
SHPRH-208ENST00000520752 MFSD4BQ5TF39 518 aa9.52□□□□□ -0.89
SHPRH-208ENST00000520752 CCNI2Q6ZMN8 369 aaPredicted RBP9.52□□□□□ -0.89
SHPRH-208ENST00000520752 CD302Q8IX05 232 aa9.52□□□□□ -0.89
SHPRH-208ENST00000520752 DMRTC2Q8IXT2 367 aaPredicted RBP9.52□□□□□ -0.89
SHPRH-208ENST00000520752 DTWD1Q8N5C7 304 aa9.52□□□□□ -0.89
SHPRH-208ENST00000520752 BEND7Q8N7W2 519 aaPredicted RBP9.52□□□□□ -0.89
SHPRH-208ENST00000520752 WNT8BQ93098 351 aa9.52□□□□□ -0.89
SHPRH-208ENST00000520752 TRIM11Q96F44 468 aa9.52□□□□□ -0.89
SHPRH-208ENST00000520752 PGBD1Q96JS3 809 aa9.52□□□□□ -0.89
SHPRH-208ENST00000520752 PANX2Q96RD6 677 aa9.52□□□□□ -0.89
SHPRH-208ENST00000520752 CCT8L2Q96SF2 557 aa9.52□□□□□ -0.89
SHPRH-208ENST00000520752 BHMT2Q9H2M3 363 aa9.52□□□□□ -0.89
SHPRH-208ENST00000520752 VCXQ9H320 206 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms