RNA–Protein interactions for RNA: ENST00000520525.1

TRAPPC13-212, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-212ENST00000520525 ARRDC4Q8NCT1 418 aa4.67□□□□□ -1.66
TRAPPC13-212ENST00000520525 GSTCDQ8NEC7 633 aa4.67□□□□□ -1.66
TRAPPC13-212ENST00000520525 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.67□□□□□ -1.66
TRAPPC13-212ENST00000520525 DDX1Q92499 740 aaKnown RBP4.67□□□□□ -1.66
TRAPPC13-212ENST00000520525 CLUHP3Q96NS8 147 aa4.67□□□□□ -1.66
TRAPPC13-212ENST00000520525 SORCS2Q96PQ0 1159 aa4.67□□□□□ -1.66
TRAPPC13-212ENST00000520525 FEZ1Q99689 392 aa4.67□□□□□ -1.66
TRAPPC13-212ENST00000520525 PCDH18Q9HCL0 1135 aa4.67□□□□□ -1.66
TRAPPC13-212ENST00000520525 SFMBT1Q9UHJ3 866 aa4.67□□□□□ -1.66
TRAPPC13-212ENST00000520525 COA3Q9Y2R0 106 aaPredicted RBP4.67□□□□□ -1.66
TRAPPC13-212ENST00000520525 CD2APQ9Y5K6 639 aa4.67□□□□□ -1.66
TRAPPC13-212ENST00000520525 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.66□□□□□ -1.66
TRAPPC13-212ENST00000520525 TCRBV5S2A0A599 114 aa4.66□□□□□ -1.66
TRAPPC13-212ENST00000520525 C1QTNF3-AMACRE9PGA6 284 aa4.66□□□□□ -1.66
TRAPPC13-212ENST00000520525 AQP7O14520 342 aa4.66□□□□□ -1.66
TRAPPC13-212ENST00000520525 EFCAB14O75071 495 aa4.66□□□□□ -1.66
TRAPPC13-212ENST00000520525 RFPL3O75679 317 aa4.66□□□□□ -1.66
TRAPPC13-212ENST00000520525 ITGB3P05106 788 aa4.66□□□□□ -1.66
TRAPPC13-212ENST00000520525 CNR2P34972 360 aa4.66□□□□□ -1.66
TRAPPC13-212ENST00000520525 PABPC4Q13310 644 aaKnown RBP eCLIP4.66□□□□□ -1.66
TRAPPC13-212ENST00000520525 C21orf62-AS1Q17RA5 79 aa4.66□□□□□ -1.66
TRAPPC13-212ENST00000520525 STEAP3Q658P3 488 aa4.66□□□□□ -1.66
TRAPPC13-212ENST00000520525 LBX2Q6XYB7 198 aa4.66□□□□□ -1.66
TRAPPC13-212ENST00000520525 BRAPQ7Z569 592 aa4.66□□□□□ -1.66
TRAPPC13-212ENST00000520525 ZC3H18Q86VM9 953 aaKnown RBP4.66□□□□□ -1.66
TRAPPC13-212ENST00000520525 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.66□□□□□ -1.66
TRAPPC13-212ENST00000520525 RBM15Q96T37 977 aaKnown RBP eCLIP4.66□□□□□ -1.66
TRAPPC13-212ENST00000520525 TRIM39Q9HCM9 518 aa4.66□□□□□ -1.66
TRAPPC13-212ENST00000520525 SMPD4Q9NXE4 827 aa4.66□□□□□ -1.66
TRAPPC13-212ENST00000520525 CLDND1Q9NY35 253 aa4.66□□□□□ -1.66
TRAPPC13-212ENST00000520525 SRRDQ9UH36 339 aa4.66□□□□□ -1.66
TRAPPC13-212ENST00000520525 PCDHB4Q9Y5E5 795 aa4.66□□□□□ -1.66
TRAPPC13-212ENST00000520525 SHROOM4Q9ULL8 1493 aa4.66□□□□□ -1.66
TRAPPC13-212ENST00000520525 HGSO14964 777 aaPredicted RBP4.65□□□□□ -1.67
TRAPPC13-212ENST00000520525 CHRNA2Q15822 529 aa4.65□□□□□ -1.67
TRAPPC13-212ENST00000520525 KIZQ2M2Z5 673 aa4.65□□□□□ -1.67
TRAPPC13-212ENST00000520525 RGL3Q3MIN7 710 aa4.65□□□□□ -1.67
TRAPPC13-212ENST00000520525 TTLL6Q8N841 843 aa4.65□□□□□ -1.67
TRAPPC13-212ENST00000520525 SCLYQ96I15 445 aa4.65□□□□□ -1.67
TRAPPC13-212ENST00000520525 CHAMP1Q96JM3 812 aa4.65□□□□□ -1.67
TRAPPC13-212ENST00000520525 KRTAP3-1Q9BYR8 98 aa4.65□□□□□ -1.67
TRAPPC13-212ENST00000520525 EPB41L1Q9H4G0 881 aa4.65□□□□□ -1.67
TRAPPC13-212ENST00000520525 DTLQ9NZJ0 730 aa4.65□□□□□ -1.67
TRAPPC13-212ENST00000520525 PPARGC1AQ9UBK2 798 aaKnown RBP4.65□□□□□ -1.67
TRAPPC13-212ENST00000520525 WASF3Q9UPY6 502 aa4.65□□□□□ -1.67
TRAPPC13-212ENST00000520525 PCDHA9Q9Y5H5 950 aa4.65□□□□□ -1.67
TRAPPC13-212ENST00000520525 DNAJC8O75937 253 aaPredicted RBP4.64□□□□□ -1.67
TRAPPC13-212ENST00000520525 CLSTN1O94985 981 aa4.64□□□□□ -1.67
TRAPPC13-212ENST00000520525 CRTAMO95727 393 aa4.64□□□□□ -1.67
TRAPPC13-212ENST00000520525 LRG1P02750 347 aa4.64□□□□□ -1.67
TRAPPC13-212ENST00000520525 ZNF28P17035 718 aa4.64□□□□□ -1.67
TRAPPC13-212ENST00000520525 NAT1P18440 290 aa4.64□□□□□ -1.67
TRAPPC13-212ENST00000520525 GYS2P54840 703 aa4.64□□□□□ -1.67
TRAPPC13-212ENST00000520525 NKX3-2P78367 333 aa4.64□□□□□ -1.67
TRAPPC13-212ENST00000520525 GUCY1A3Q02108 690 aa4.64□□□□□ -1.67
TRAPPC13-212ENST00000520525 DALRD3Q5D0E6 543 aaKnown RBP4.64□□□□□ -1.67
TRAPPC13-212ENST00000520525 FAM26FQ5R3K3 315 aa4.64□□□□□ -1.67
TRAPPC13-212ENST00000520525 CPZQ66K79 652 aa4.64□□□□□ -1.67
TRAPPC13-212ENST00000520525 TEPPQ6URK8 271 aa4.64□□□□□ -1.67
TRAPPC13-212ENST00000520525 FGD2Q7Z6J4 655 aa4.64□□□□□ -1.67
TRAPPC13-212ENST00000520525 MTDHQ86UE4 582 aaKnown RBP4.64□□□□□ -1.67
TRAPPC13-212ENST00000520525 NINJ1Q92982 152 aa4.64□□□□□ -1.67
TRAPPC13-212ENST00000520525 TOE1Q96GM8 510 aaKnown RBP4.64□□□□□ -1.67
TRAPPC13-212ENST00000520525 NGRNQ9NPE2 291 aaKnown RBP4.64□□□□□ -1.67
TRAPPC13-212ENST00000520525 MYOTQ9UBF9 498 aa4.64□□□□□ -1.67
TRAPPC13-212ENST00000520525 PLAAQ9Y263 795 aa4.64□□□□□ -1.67
TRAPPC13-212ENST00000520525 PCDHA8Q9Y5H6 950 aa4.64□□□□□ -1.67
TRAPPC13-212ENST00000520525 TCRBV16S1A1N1A0A5B0 115 aa4.63□□□□□ -1.67
TRAPPC13-212ENST00000520525 ARVCFO00192 962 aa4.63□□□□□ -1.67
TRAPPC13-212ENST00000520525 DDX3XO00571 662 aaKnown RBP eCLIP4.63□□□□□ -1.67
TRAPPC13-212ENST00000520525 DGKIO75912 1065 aa4.63□□□□□ -1.67
TRAPPC13-212ENST00000520525 RASGRP1O95267 797 aa4.63□□□□□ -1.67
TRAPPC13-212ENST00000520525 SDSP20132 328 aa4.63□□□□□ -1.67
TRAPPC13-212ENST00000520525 GRK2P25098 689 aa4.63□□□□□ -1.67
TRAPPC13-212ENST00000520525 GRK3P35626 688 aa4.63□□□□□ -1.67
TRAPPC13-212ENST00000520525 MCTP2Q6DN12 878 aa4.63□□□□□ -1.67
TRAPPC13-212ENST00000520525 DHX37Q8IY37 1157 aaKnown RBP4.63□□□□□ -1.67
TRAPPC13-212ENST00000520525 NIM1KQ8IY84 436 aa4.63□□□□□ -1.67
TRAPPC13-212ENST00000520525 FAM177A1Q8N128 213 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC13-212ENST00000520525 TXNDC5Q8NBS9 432 aaKnown RBP4.63□□□□□ -1.67
TRAPPC13-212ENST00000520525 MAGEB10Q96LZ2 347 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC13-212ENST00000520525 ZSWIM3Q96MP5 696 aa4.63□□□□□ -1.67
TRAPPC13-212ENST00000520525 YIPF4Q9BSR8 244 aa4.63□□□□□ -1.67
TRAPPC13-212ENST00000520525 ALG1Q9BT22 464 aa4.63□□□□□ -1.67
TRAPPC13-212ENST00000520525 JAM3Q9BX67 310 aa4.63□□□□□ -1.67
TRAPPC13-212ENST00000520525 C1QTNF3Q9BXJ4 246 aa4.63□□□□□ -1.67
TRAPPC13-212ENST00000520525 SCAND2PQ9GZW5 306 aaPredicted RBP4.63□□□□□ -1.67
TRAPPC13-212ENST00000520525 SMOC1Q9H4F8 434 aa4.63□□□□□ -1.67
TRAPPC13-212ENST00000520525 IPPKQ9H8X2 491 aa4.63□□□□□ -1.67
TRAPPC13-212ENST00000520525 MROH6A6NGR9 719 aa4.62□□□□□ -1.67
TRAPPC13-212ENST00000520525 FAM47E-STBD1D6RA91 191 aa4.62□□□□□ -1.67
TRAPPC13-212ENST00000520525 SOD2P04179 222 aa4.62□□□□□ -1.67
TRAPPC13-212ENST00000520525 HMGA2P52926 109 aa4.62□□□□□ -1.67
TRAPPC13-212ENST00000520525 MLLT6P55198 1093 aaPredicted RBP4.62□□□□□ -1.67
TRAPPC13-212ENST00000520525 PAK1Q13153 545 aa4.62□□□□□ -1.67
TRAPPC13-212ENST00000520525 TBC1D10BQ4KMP7 808 aaPredicted RBP4.62□□□□□ -1.67
TRAPPC13-212ENST00000520525 TM4SF20Q53R12 229 aa4.62□□□□□ -1.67
TRAPPC13-212ENST00000520525 PROSER1Q86XN7 944 aa4.62□□□□□ -1.67
TRAPPC13-212ENST00000520525 PCDH19Q8TAB3 1148 aa4.62□□□□□ -1.67
TRAPPC13-212ENST00000520525 PIP4K2CQ8TBX8 421 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms