RNA–Protein interactions for RNA: ENST00000520513.1

LINC00535-204, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 305 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-204ENST00000520513 CNR2P34972 360 aa7.29□□□□□ -1.24
LINC00535-204ENST00000520513 PABPC4Q13310 644 aaKnown RBP eCLIP7.29□□□□□ -1.24
LINC00535-204ENST00000520513 EMC4Q5J8M3 183 aa7.29□□□□□ -1.24
LINC00535-204ENST00000520513 UBXN11Q5T124 520 aa7.29□□□□□ -1.24
LINC00535-204ENST00000520513 NIM1KQ8IY84 436 aa7.29□□□□□ -1.24
LINC00535-204ENST00000520513 CHAMP1Q96JM3 812 aa7.29□□□□□ -1.24
LINC00535-204ENST00000520513 JAM3Q9BX67 310 aa7.29□□□□□ -1.24
LINC00535-204ENST00000520513 RBPJLQ9UBG7 517 aa7.29□□□□□ -1.24
LINC00535-204ENST00000520513 SFMBT1Q9UHJ3 866 aa7.29□□□□□ -1.24
LINC00535-204ENST00000520513 JAG2Q9Y219 1238 aa7.29□□□□□ -1.24
LINC00535-204ENST00000520513 BLACEA4D250 179 aa7.28□□□□□ -1.24
LINC00535-204ENST00000520513 HGSO14964 777 aaPredicted RBP7.28□□□□□ -1.24
LINC00535-204ENST00000520513 LRG1P02750 347 aa7.28□□□□□ -1.24
LINC00535-204ENST00000520513 VIL1P09327 827 aaKnown RBP7.28□□□□□ -1.24
LINC00535-204ENST00000520513 NAT1P18440 290 aa7.28□□□□□ -1.24
LINC00535-204ENST00000520513 TM4SF20Q53R12 229 aa7.28□□□□□ -1.24
LINC00535-204ENST00000520513 STEAP3Q658P3 488 aa7.28□□□□□ -1.24
LINC00535-204ENST00000520513 KCNT2Q6UVM3 1135 aa7.28□□□□□ -1.24
LINC00535-204ENST00000520513 PTPRN2Q92932 1015 aa7.28□□□□□ -1.24
LINC00535-204ENST00000520513 IFT57Q9NWB7 429 aa7.28□□□□□ -1.24
LINC00535-204ENST00000520513 APPP05067 770 aa7.27□□□□□ -1.25
LINC00535-204ENST00000520513 C6orf222P0C671 652 aaPredicted RBP7.27□□□□□ -1.25
LINC00535-204ENST00000520513 MASP1P48740 699 aa7.27□□□□□ -1.25
LINC00535-204ENST00000520513 RSPO2Q6UXX9 243 aaPredicted RBP7.27□□□□□ -1.25
LINC00535-204ENST00000520513 USP53Q70EK8 1073 aa7.27□□□□□ -1.25
LINC00535-204ENST00000520513 ZC3H18Q86VM9 953 aaKnown RBP7.27□□□□□ -1.25
LINC00535-204ENST00000520513 RBM12BQ8IXT5 1001 aaKnown RBP7.27□□□□□ -1.25
LINC00535-204ENST00000520513 DCAF4Q8WV16 495 aa7.27□□□□□ -1.25
LINC00535-204ENST00000520513 ZSWIM3Q96MP5 696 aa7.27□□□□□ -1.25
LINC00535-204ENST00000520513 ZFYVE21Q9BQ24 234 aa7.27□□□□□ -1.25
LINC00535-204ENST00000520513 PHF20Q9BVI0 1012 aa7.27□□□□□ -1.25
LINC00535-204ENST00000520513 MAGEC2Q9UBF1 373 aaPredicted RBP7.27□□□□□ -1.25
LINC00535-204ENST00000520513 COA3Q9Y2R0 106 aaPredicted RBP7.27□□□□□ -1.25
LINC00535-204ENST00000520513 DDX3XO00571 662 aaKnown RBP eCLIP7.26□□□□□ -1.25
LINC00535-204ENST00000520513 RAPGEF3O95398 923 aa7.26□□□□□ -1.25
LINC00535-204ENST00000520513 RGL3Q3MIN7 710 aa7.26□□□□□ -1.25
LINC00535-204ENST00000520513 MCTP2Q6DN12 878 aa7.26□□□□□ -1.25
LINC00535-204ENST00000520513 STYK1Q6J9G0 422 aa7.26□□□□□ -1.25
LINC00535-204ENST00000520513 TEPPQ6URK8 271 aa7.26□□□□□ -1.25
LINC00535-204ENST00000520513 KRT26Q7Z3Y9 468 aa7.26□□□□□ -1.25
LINC00535-204ENST00000520513 GSTCDQ8NEC7 633 aa7.26□□□□□ -1.25
LINC00535-204ENST00000520513 RBM15Q96T37 977 aaKnown RBP eCLIP7.26□□□□□ -1.25
LINC00535-204ENST00000520513 NGRNQ9NPE2 291 aaKnown RBP7.26□□□□□ -1.25
LINC00535-204ENST00000520513 GPR27Q9NS67 375 aa7.26□□□□□ -1.25
LINC00535-204ENST00000520513 DTLQ9NZJ0 730 aa7.26□□□□□ -1.25
LINC00535-204ENST00000520513 NOP58Q9Y2X3 529 aaKnown RBP7.26□□□□□ -1.25
LINC00535-204ENST00000520513 PCDHB4Q9Y5E5 795 aa7.26□□□□□ -1.25
LINC00535-204ENST00000520513 AQP7O14520 342 aa7.25□□□□□ -1.25
LINC00535-204ENST00000520513 PPM1GO15355 546 aaPredicted RBP7.25□□□□□ -1.25
LINC00535-204ENST00000520513 GGNQ86UU5 652 aa7.25□□□□□ -1.25
LINC00535-204ENST00000520513 PROSER1Q86XN7 944 aa7.25□□□□□ -1.25
LINC00535-204ENST00000520513 TXNDC5Q8NBS9 432 aaKnown RBP7.25□□□□□ -1.25
LINC00535-204ENST00000520513 PIP4K2CQ8TBX8 421 aa7.25□□□□□ -1.25
LINC00535-204ENST00000520513 EPB41L1Q9H4G0 881 aa7.25□□□□□ -1.25
LINC00535-204ENST00000520513 MYOTQ9UBF9 498 aa7.25□□□□□ -1.25
LINC00535-204ENST00000520513 COL4A3BPQ9Y5P4 624 aa7.25□□□□□ -1.25
LINC00535-204ENST00000520513 ASXL2Q76L83 1435 aa7.25□□□□□ -1.25
LINC00535-204ENST00000520513 hCG_2014768A0A024R1R8 64 aa7.24□□□□□ -1.25
LINC00535-204ENST00000520513 K7ESM1 405 aa7.24□□□□□ -1.25
LINC00535-204ENST00000520513 ZNF28P17035 718 aa7.24□□□□□ -1.25
LINC00535-204ENST00000520513 MLLT6P55198 1093 aaPredicted RBP7.24□□□□□ -1.25
LINC00535-204ENST00000520513 CHRNA2Q15822 529 aa7.24□□□□□ -1.25
LINC00535-204ENST00000520513 FAM26FQ5R3K3 315 aa7.24□□□□□ -1.25
LINC00535-204ENST00000520513 TTLL6Q8N841 843 aa7.24□□□□□ -1.25
LINC00535-204ENST00000520513 CLEC4DQ8WXI8 215 aa7.24□□□□□ -1.25
LINC00535-204ENST00000520513 TOE1Q96GM8 510 aaKnown RBP7.24□□□□□ -1.25
LINC00535-204ENST00000520513 GPATCH3Q96I76 525 aa7.24□□□□□ -1.25
LINC00535-204ENST00000520513 CLUHP3Q96NS8 147 aa7.24□□□□□ -1.25
LINC00535-204ENST00000520513 SLC52A2Q9HAB3 445 aa7.24□□□□□ -1.25
LINC00535-204ENST00000520513 ASH2LQ9UBL3 628 aa7.24□□□□□ -1.25
LINC00535-204ENST00000520513 NDOR1Q9UHB4 597 aa7.24□□□□□ -1.25
LINC00535-204ENST00000520513 TELO2Q9Y4R8 837 aa7.24□□□□□ -1.25
LINC00535-204ENST00000520513 SLC27A2O14975 620 aa7.23□□□□□ -1.25
LINC00535-204ENST00000520513 DGKIO75912 1065 aa7.23□□□□□ -1.25
LINC00535-204ENST00000520513 LTFP02788 710 aa7.23□□□□□ -1.25
LINC00535-204ENST00000520513 IGBP1P78318 339 aa7.23□□□□□ -1.25
LINC00535-204ENST00000520513 NKX3-2P78367 333 aa7.23□□□□□ -1.25
LINC00535-204ENST00000520513 HHIPL2Q6UWX4 724 aa7.23□□□□□ -1.25
LINC00535-204ENST00000520513 TRIM39Q9HCM9 518 aa7.23□□□□□ -1.25
LINC00535-204ENST00000520513 PCDH12Q9NPG4 1184 aa7.23□□□□□ -1.25
LINC00535-204ENST00000520513 MAPRE3Q9UPY8 281 aa7.23□□□□□ -1.25
LINC00535-204ENST00000520513 ASLP04424 464 aa7.22□□□□□ -1.25
LINC00535-204ENST00000520513 COL6A2P12110 1019 aa7.22□□□□□ -1.25
LINC00535-204ENST00000520513 SOX5P35711 763 aa7.22□□□□□ -1.25
LINC00535-204ENST00000520513 STAT3P40763 770 aa7.22□□□□□ -1.25
LINC00535-204ENST00000520513 ANAPC15P60006 121 aa7.22□□□□□ -1.25
LINC00535-204ENST00000520513 ZNF827Q17R98 1081 aa7.22□□□□□ -1.25
LINC00535-204ENST00000520513 TBC1D10BQ4KMP7 808 aaPredicted RBP7.22□□□□□ -1.25
LINC00535-204ENST00000520513 PHF19Q5T6S3 580 aa7.22□□□□□ -1.25
LINC00535-204ENST00000520513 TMC5Q6UXY8 1006 aa7.22□□□□□ -1.25
LINC00535-204ENST00000520513 LBX2Q6XYB7 198 aa7.22□□□□□ -1.25
LINC00535-204ENST00000520513 BRAPQ7Z569 592 aa7.22□□□□□ -1.25
LINC00535-204ENST00000520513 THNSL2Q86YJ6 484 aa7.22□□□□□ -1.25
LINC00535-204ENST00000520513 DHX37Q8IY37 1157 aaKnown RBP7.22□□□□□ -1.25
LINC00535-204ENST00000520513 AHI1Q8N157 1196 aa7.22□□□□□ -1.25
LINC00535-204ENST00000520513 PPM1KQ8N3J5 372 aa7.22□□□□□ -1.25
LINC00535-204ENST00000520513 SLC7A14Q8TBB6 771 aa7.22□□□□□ -1.25
LINC00535-204ENST00000520513 CHAC2Q8WUX2 184 aa7.22□□□□□ -1.25
LINC00535-204ENST00000520513 ZCCHC14Q8WYQ9 949 aaKnown RBP7.22□□□□□ -1.25
LINC00535-204ENST00000520513 MBD6Q96DN6 1003 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms