RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 TGFB1P01137 390 aa7.02□□□□□ -1.29
HMGB1P46-201ENST00000520062 GOLGA6DP0CG33 693 aa7.02□□□□□ -1.29
HMGB1P46-201ENST00000520062 RBP3P10745 1247 aa7.02□□□□□ -1.29
HMGB1P46-201ENST00000520062 ZSCAN20P17040 1043 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P46-201ENST00000520062 SLC9A1P19634 815 aa7.02□□□□□ -1.29
HMGB1P46-201ENST00000520062 GNALP38405 381 aa7.02□□□□□ -1.29
HMGB1P46-201ENST00000520062 RECQLP46063 649 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P46-201ENST00000520062 KIF11P52732 1056 aa7.02□□□□□ -1.29
HMGB1P46-201ENST00000520062 ZP2Q05996 745 aa7.02□□□□□ -1.29
HMGB1P46-201ENST00000520062 NR0B2Q15466 257 aa7.02□□□□□ -1.29
HMGB1P46-201ENST00000520062 SLC14A2Q15849 920 aa7.02□□□□□ -1.29
HMGB1P46-201ENST00000520062 CXorf57Q6NSI4 855 aaKnown RBP7.02□□□□□ -1.29
HMGB1P46-201ENST00000520062 CABP7Q86V35 215 aa7.02□□□□□ -1.29
HMGB1P46-201ENST00000520062 OXR1Q8N573 874 aa7.02□□□□□ -1.29
HMGB1P46-201ENST00000520062 C1orf162Q8NEQ5 155 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P46-201ENST00000520062 PHOSPHO1Q8TCT1 267 aa7.02□□□□□ -1.29
HMGB1P46-201ENST00000520062 JPH3Q8WXH2 748 aaPredicted RBP7.02□□□□□ -1.29
HMGB1P46-201ENST00000520062 ZDHHC5Q9C0B5 715 aa7.02□□□□□ -1.29
HMGB1P46-201ENST00000520062 KCNH7Q9NS40 1196 aa7.02□□□□□ -1.29
HMGB1P46-201ENST00000520062 TOMM22Q9NS69 142 aa7.02□□□□□ -1.29
HMGB1P46-201ENST00000520062 GOLGA6AQ9NYA3 693 aa7.02□□□□□ -1.29
HMGB1P46-201ENST00000520062 FITM1A5D6W6 292 aa7.01□□□□□ -1.29
HMGB1P46-201ENST00000520062 CAND2O75155 1236 aa7.01□□□□□ -1.29
HMGB1P46-201ENST00000520062 MAP4K4O95819 1239 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P46-201ENST00000520062 PROCP04070 461 aa7.01□□□□□ -1.29
HMGB1P46-201ENST00000520062 ATF3P18847 181 aa7.01□□□□□ -1.29
HMGB1P46-201ENST00000520062 CCND1P24385 295 aa7.01□□□□□ -1.29
HMGB1P46-201ENST00000520062 CD40P25942 277 aa7.01□□□□□ -1.29
HMGB1P46-201ENST00000520062 FNTBP49356 437 aa7.01□□□□□ -1.29
HMGB1P46-201ENST00000520062 MVKQ03426 396 aa7.01□□□□□ -1.29
HMGB1P46-201ENST00000520062 RALGPS1Q5JS13 557 aa7.01□□□□□ -1.29
HMGB1P46-201ENST00000520062 STEAP3Q658P3 488 aa7.01□□□□□ -1.29
HMGB1P46-201ENST00000520062 FSTL4Q6MZW2 842 aa7.01□□□□□ -1.29
HMGB1P46-201ENST00000520062 KCTD1Q719H9 257 aa7.01□□□□□ -1.29
HMGB1P46-201ENST00000520062 DCP2Q8IU60 420 aaKnown RBP7.01□□□□□ -1.29
HMGB1P46-201ENST00000520062 MAGEB6Q8N7X4 407 aa7.01□□□□□ -1.29
HMGB1P46-201ENST00000520062 NETO2Q8NC67 525 aa7.01□□□□□ -1.29
HMGB1P46-201ENST00000520062 TTC8Q8TAM2 541 aa7.01□□□□□ -1.29
HMGB1P46-201ENST00000520062 FAXDC2Q96IV6 333 aa7.01□□□□□ -1.29
HMGB1P46-201ENST00000520062 SMOC1Q9H4F8 434 aa7.01□□□□□ -1.29
HMGB1P46-201ENST00000520062 ZMAT4Q9H898 229 aa7.01□□□□□ -1.29
HMGB1P46-201ENST00000520062 USP36Q9P275 1121 aaKnown RBP7.01□□□□□ -1.29
HMGB1P46-201ENST00000520062 PNMA8BQ9ULN7 279 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P46-201ENST00000520062 LUC7L2Q9Y383 392 aaKnown RBP7.01□□□□□ -1.29
HMGB1P46-201ENST00000520062 NOC2LQ9Y3T9 749 aaKnown RBP7.01□□□□□ -1.29
HMGB1P46-201ENST00000520062 MRFAP1Q9Y605 127 aa7.01□□□□□ -1.29
HMGB1P46-201ENST00000520062 SCDO00767 359 aa7□□□□□ -1.29
HMGB1P46-201ENST00000520062 HGSO14964 777 aaPredicted RBP7□□□□□ -1.29
HMGB1P46-201ENST00000520062 TADA3O75528 432 aa7□□□□□ -1.29
HMGB1P46-201ENST00000520062 MT-CO1P00395 513 aa7□□□□□ -1.29
HMGB1P46-201ENST00000520062 CD8BP10966 210 aa7□□□□□ -1.29
HMGB1P46-201ENST00000520062 SDHAP31040 664 aa7□□□□□ -1.29
HMGB1P46-201ENST00000520062 BNIP3Q12983 259 aa7□□□□□ -1.29
HMGB1P46-201ENST00000520062 EPHA7Q15375 998 aa7□□□□□ -1.29
HMGB1P46-201ENST00000520062 FRMD7Q6ZUT3 714 aa7□□□□□ -1.29
HMGB1P46-201ENST00000520062 NUP43Q8NFH3 380 aa7□□□□□ -1.29
HMGB1P46-201ENST00000520062 LMBR1Q8WVP7 490 aa7□□□□□ -1.29
HMGB1P46-201ENST00000520062 SEC14L1Q92503 715 aa7□□□□□ -1.29
HMGB1P46-201ENST00000520062 TOPORSQ9NS56 1045 aaPredicted RBP7□□□□□ -1.29
HMGB1P46-201ENST00000520062 FBLN5Q9UBX5 448 aa7□□□□□ -1.29
HMGB1P46-201ENST00000520062 ANKRD6Q9Y2G4 727 aa7□□□□□ -1.29
HMGB1P46-201ENST00000520062 GIT1Q9Y2X7 761 aa7□□□□□ -1.29
HMGB1P46-201ENST00000520062 KCNK3O14649 394 aa6.99□□□□□ -1.29
HMGB1P46-201ENST00000520062 NTRK1P04629 796 aa6.99□□□□□ -1.29
HMGB1P46-201ENST00000520062 GLI4P10075 376 aa6.99□□□□□ -1.29
HMGB1P46-201ENST00000520062 VCAM1P19320 739 aa6.99□□□□□ -1.29
HMGB1P46-201ENST00000520062 CD96P40200 585 aa6.99□□□□□ -1.29
HMGB1P46-201ENST00000520062 MLC1Q15049 377 aa6.99□□□□□ -1.29
HMGB1P46-201ENST00000520062 GFOD2Q3B7J2 385 aa6.99□□□□□ -1.29
HMGB1P46-201ENST00000520062 CPZQ66K79 652 aa6.99□□□□□ -1.29
HMGB1P46-201ENST00000520062 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P46-201ENST00000520062 C14orf80Q86SX3 495 aa6.99□□□□□ -1.29
HMGB1P46-201ENST00000520062 NME9Q86XW9 330 aa6.99□□□□□ -1.29
HMGB1P46-201ENST00000520062 WFDC3Q8IUB2 231 aa6.99□□□□□ -1.29
HMGB1P46-201ENST00000520062 TRIM48Q8IWZ4 208 aa6.99□□□□□ -1.29
HMGB1P46-201ENST00000520062 CPA6Q8N4T0 437 aa6.99□□□□□ -1.29
HMGB1P46-201ENST00000520062 ACAP3Q96P50 834 aa6.99□□□□□ -1.29
HMGB1P46-201ENST00000520062 ORAI2Q96SN7 254 aa6.99□□□□□ -1.29
HMGB1P46-201ENST00000520062 SPOCK3Q9BQ16 436 aa6.99□□□□□ -1.29
HMGB1P46-201ENST00000520062 CD244Q9BZW8 370 aa6.99□□□□□ -1.29
HMGB1P46-201ENST00000520062 MKS1Q9NXB0 559 aa6.99□□□□□ -1.29
HMGB1P46-201ENST00000520062 IP6K2Q9UHH9 426 aa6.99□□□□□ -1.29
HMGB1P46-201ENST00000520062 ARID4BQ4LE39 1312 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P46-201ENST00000520062 A0A1W2PQJ5 194 aa6.98□□□□□ -1.29
HMGB1P46-201ENST00000520062 NOTOA8MTQ0 251 aa6.98□□□□□ -1.29
HMGB1P46-201ENST00000520062 MSTNO14793 375 aa6.98□□□□□ -1.29
HMGB1P46-201ENST00000520062 KDM1AO60341 852 aa6.98□□□□□ -1.29
HMGB1P46-201ENST00000520062 COBLO75128 1261 aa6.98□□□□□ -1.29
HMGB1P46-201ENST00000520062 CT47B1P0C2W7 299 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P46-201ENST00000520062 MSL3P1P0C860 447 aa6.98□□□□□ -1.29
HMGB1P46-201ENST00000520062 PRKCAP17252 672 aa6.98□□□□□ -1.29
HMGB1P46-201ENST00000520062 PTX3P26022 381 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P46-201ENST00000520062 PCBP2Q15366 365 aaKnown RBP eCLIP6.98□□□□□ -1.29
HMGB1P46-201ENST00000520062 ESRP1Q6NXG1 681 aaKnown RBP6.98□□□□□ -1.29
HMGB1P46-201ENST00000520062 PGM2L1Q6PCE3 622 aa6.98□□□□□ -1.29
HMGB1P46-201ENST00000520062 SLC23A3Q6PIS1 610 aa6.98□□□□□ -1.29
HMGB1P46-201ENST00000520062 PNMA8AQ86V59 439 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P46-201ENST00000520062 VSIG10LQ86VR7 867 aa6.98□□□□□ -1.29
HMGB1P46-201ENST00000520062 AMOTL1Q8IY63 956 aa6.98□□□□□ -1.29
HMGB1P46-201ENST00000520062 SSH1Q8WYL5 1049 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms