RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 RDM1Q8NG50 284 aa13.09□□□□□ -0.31
SPIDR-212ENST00000519661 PCYT2Q99447 389 aa13.09□□□□□ -0.31
SPIDR-212ENST00000519661 NOC4LQ9BVI4 516 aaKnown RBP13.09□□□□□ -0.31
SPIDR-212ENST00000519661 BRMS1Q9HCU9 246 aa13.09□□□□□ -0.31
SPIDR-212ENST00000519661 MBLAC1A4D2B0 266 aaPredicted RBP13.08□□□□□ -0.32
SPIDR-212ENST00000519661 MSH4O15457 936 aa13.08□□□□□ -0.32
SPIDR-212ENST00000519661 PQBP1O60828 265 aaKnown RBP13.08□□□□□ -0.32
SPIDR-212ENST00000519661 CAND2O75155 1236 aa13.08□□□□□ -0.32
SPIDR-212ENST00000519661 MYCNP04198 464 aaPredicted RBP13.08□□□□□ -0.32
SPIDR-212ENST00000519661 TCF7P36402 384 aaPredicted RBP13.08□□□□□ -0.32
SPIDR-212ENST00000519661 MAGEA10P43363 369 aaPredicted RBP13.08□□□□□ -0.32
SPIDR-212ENST00000519661 ACTR2P61160 394 aa13.08□□□□□ -0.32
SPIDR-212ENST00000519661 KRT76Q01546 638 aa13.08□□□□□ -0.32
SPIDR-212ENST00000519661 KIAA0753Q2KHM9 967 aa13.08□□□□□ -0.32
SPIDR-212ENST00000519661 EARS2Q5JPH6 523 aaKnown RBP13.08□□□□□ -0.32
SPIDR-212ENST00000519661 MFSD5Q6N075 450 aa13.08□□□□□ -0.32
SPIDR-212ENST00000519661 SERINC5Q86VE9 423 aa13.08□□□□□ -0.32
SPIDR-212ENST00000519661 DIS3L2Q8IYB7 885 aaKnown RBP13.08□□□□□ -0.32
SPIDR-212ENST00000519661 INTS4Q96HW7 963 aaKnown RBP13.08□□□□□ -0.32
SPIDR-212ENST00000519661 FAM20AQ96MK3 541 aa13.08□□□□□ -0.32
SPIDR-212ENST00000519661 SDF4Q9BRK5 362 aa13.08□□□□□ -0.32
SPIDR-212ENST00000519661 ZNF215Q9UL58 517 aaPredicted RBP13.08□□□□□ -0.32
SPIDR-212ENST00000519661 KIF3AQ9Y496 699 aa13.08□□□□□ -0.32
SPIDR-212ENST00000519661 TELO2Q9Y4R8 837 aa13.08□□□□□ -0.32
SPIDR-212ENST00000519661 TRIOBPQ9H2D6 2365 aa13.07□□□□□ -0.32
SPIDR-212ENST00000519661 CCDC194A0A1B0GVG4 234 aa13.07□□□□□ -0.32
SPIDR-212ENST00000519661 BTBD18B2RXH4 712 aa13.07□□□□□ -0.32
SPIDR-212ENST00000519661 ZNF286BP0CG31 522 aa13.07□□□□□ -0.32
SPIDR-212ENST00000519661 TRAPPC10P48553 1259 aa13.07□□□□□ -0.32
SPIDR-212ENST00000519661 NR5A1Q13285 461 aa13.07□□□□□ -0.32
SPIDR-212ENST00000519661 INF2Q27J81 1249 aa13.07□□□□□ -0.32
SPIDR-212ENST00000519661 TRIM71Q2Q1W2 868 aaKnown RBP13.07□□□□□ -0.32
SPIDR-212ENST00000519661 PRR16Q569H4 304 aa13.07□□□□□ -0.32
SPIDR-212ENST00000519661 CAGE1Q8TC20 777 aa13.07□□□□□ -0.32
SPIDR-212ENST00000519661 VWCEQ96DN2 955 aa13.07□□□□□ -0.32
SPIDR-212ENST00000519661 C8orf76Q96K31 380 aa13.07□□□□□ -0.32
SPIDR-212ENST00000519661 ZNF577Q9BSK1 485 aa13.07□□□□□ -0.32
SPIDR-212ENST00000519661 TRPV6Q9H1D0 765 aa13.07□□□□□ -0.32
SPIDR-212ENST00000519661 SMARCAD1Q9H4L7 1026 aa13.07□□□□□ -0.32
SPIDR-212ENST00000519661 TMEM39AQ9NV64 488 aa13.07□□□□□ -0.32
SPIDR-212ENST00000519661 ERAP1Q9NZ08 941 aa13.07□□□□□ -0.32
SPIDR-212ENST00000519661 PRKAG2Q9UGJ0 569 aa13.07□□□□□ -0.32
SPIDR-212ENST00000519661 MAFBQ9Y5Q3 323 aaPredicted RBP13.07□□□□□ -0.32
SPIDR-212ENST00000519661 NRCAMQ92823 1304 aa13.07□□□□□ -0.32
SPIDR-212ENST00000519661 PARNO95453 639 aaKnown RBP13.06□□□□□ -0.32
SPIDR-212ENST00000519661 TDP2O95551 362 aa13.06□□□□□ -0.32
SPIDR-212ENST00000519661 RPLP2P05387 115 aaKnown RBP13.06□□□□□ -0.32
SPIDR-212ENST00000519661 SFNP31947 248 aa13.06□□□□□ -0.32
SPIDR-212ENST00000519661 ZNF76P36508 570 aa13.06□□□□□ -0.32
SPIDR-212ENST00000519661 SPIRE1Q08AE8 756 aa13.06□□□□□ -0.32
SPIDR-212ENST00000519661 PTK7Q13308 1070 aa13.06□□□□□ -0.32
SPIDR-212ENST00000519661 PPP2R5CQ13362 524 aa13.06□□□□□ -0.32
SPIDR-212ENST00000519661 TRIM29Q14134 588 aa13.06□□□□□ -0.32
SPIDR-212ENST00000519661 RASIP1Q5U651 963 aa13.06□□□□□ -0.32
SPIDR-212ENST00000519661 GDF6Q6KF10 455 aaPredicted RBP13.06□□□□□ -0.32
SPIDR-212ENST00000519661 FAM43BQ6ZT52 329 aaPredicted RBP13.06□□□□□ -0.32
SPIDR-212ENST00000519661 TRMT13Q9NUP7 481 aaKnown RBP13.06□□□□□ -0.32
SPIDR-212ENST00000519661 HDAC6Q9UBN7 1215 aa13.06□□□□□ -0.32
SPIDR-212ENST00000519661 ZMYND8Q9ULU4 1186 aaPredicted RBP13.06□□□□□ -0.32
SPIDR-212ENST00000519661 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.06□□□□□ -0.32
SPIDR-212ENST00000519661 IGSF9BQ9UPX0 1349 aa13.06□□□□□ -0.32
SPIDR-212ENST00000519661 WDR64B1ANS9 1081 aa13.05□□□□□ -0.32
SPIDR-212ENST00000519661 SLC37A4O43826 429 aa13.05□□□□□ -0.32
SPIDR-212ENST00000519661 PFKMP08237 780 aa13.05□□□□□ -0.32
SPIDR-212ENST00000519661 SMIM10L2AP0DMW4 78 aa13.05□□□□□ -0.32
SPIDR-212ENST00000519661 SMIM10L2BP0DMW5 78 aa13.05□□□□□ -0.32
SPIDR-212ENST00000519661 RFC2P35250 354 aa13.05□□□□□ -0.32
SPIDR-212ENST00000519661 HIC1Q14526 733 aa13.05□□□□□ -0.32
SPIDR-212ENST00000519661 SAFBQ15424 915 aaKnown RBP eCLIP13.05□□□□□ -0.32
SPIDR-212ENST00000519661 LRIT3Q3SXY7 679 aa13.05□□□□□ -0.32
SPIDR-212ENST00000519661 TRAF7Q6Q0C0 670 aa13.05□□□□□ -0.32
SPIDR-212ENST00000519661 PIK3AP1Q6ZUJ8 805 aa13.05□□□□□ -0.32
SPIDR-212ENST00000519661 TRIM50Q86XT4 487 aa13.05□□□□□ -0.32
SPIDR-212ENST00000519661 NOSTRINQ8IVI9 506 aa13.05□□□□□ -0.32
SPIDR-212ENST00000519661 C7orf31Q8N865 590 aa13.05□□□□□ -0.32
SPIDR-212ENST00000519661 DHX38Q92620 1227 aaKnown RBP13.05□□□□□ -0.32
SPIDR-212ENST00000519661 HAS1Q92839 578 aa13.05□□□□□ -0.32
SPIDR-212ENST00000519661 TNPO1Q92973 898 aaKnown RBP13.05□□□□□ -0.32
SPIDR-212ENST00000519661 VTI1AQ96AJ9 217 aa13.05□□□□□ -0.32
SPIDR-212ENST00000519661 WNT8AQ9H1J5 351 aa13.05□□□□□ -0.32
SPIDR-212ENST00000519661 HIPK3Q9H422 1215 aa13.05□□□□□ -0.32
SPIDR-212ENST00000519661 DDX25Q9UHL0 483 aaKnown RBP13.05□□□□□ -0.32
SPIDR-212ENST00000519661 VAV3Q9UKW4 847 aa13.05□□□□□ -0.32
SPIDR-212ENST00000519661 COLQQ9Y215 455 aaPredicted RBP13.05□□□□□ -0.32
SPIDR-212ENST00000519661 PCDHA10Q9Y5I2 948 aa13.05□□□□□ -0.32
SPIDR-212ENST00000519661 GNAT1P11488 350 aa13.04□□□□□ -0.32
SPIDR-212ENST00000519661 RAG1P15918 1043 aa13.04□□□□□ -0.32
SPIDR-212ENST00000519661 SYN1P17600 705 aa13.04□□□□□ -0.32
SPIDR-212ENST00000519661 JAK3P52333 1124 aa13.04□□□□□ -0.32
SPIDR-212ENST00000519661 BFSP2Q13515 415 aa13.04□□□□□ -0.32
SPIDR-212ENST00000519661 PTGISQ16647 500 aa13.04□□□□□ -0.32
SPIDR-212ENST00000519661 MARCH8Q5T0T0 291 aa13.04□□□□□ -0.32
SPIDR-212ENST00000519661 TAF2Q6P1X5 1199 aa13.04□□□□□ -0.32
SPIDR-212ENST00000519661 CCDC60Q8IWA6 550 aaPredicted RBP13.04□□□□□ -0.32
SPIDR-212ENST00000519661 SLFN12Q8IYM2 578 aa13.04□□□□□ -0.32
SPIDR-212ENST00000519661 ATP8B4Q8TF62 1192 aa13.04□□□□□ -0.32
SPIDR-212ENST00000519661 MTMR9Q96QG7 549 aa13.04□□□□□ -0.32
SPIDR-212ENST00000519661 RNPEPQ9H4A4 650 aa13.04□□□□□ -0.32
SPIDR-212ENST00000519661 COL1A2P08123 1366 aa13.04□□□□□ -0.32
SPIDR-212ENST00000519661 FAM205CA6NFA0 338 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms