RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 CDHR1Q96JP9 859 aa14.28□□□□□ -0.12
CSMD1-205ENST00000519623 TCEANC2Q96MN5 208 aa14.28□□□□□ -0.12
CSMD1-205ENST00000519623 JADE2Q9NQC1 790 aa14.28□□□□□ -0.12
CSMD1-205ENST00000519623 FAM217BQ9NTX9 383 aaPredicted RBP14.28□□□□□ -0.12
CSMD1-205ENST00000519623 CNTNAP5Q8WYK1 1306 aa14.27□□□□□ -0.12
CSMD1-205ENST00000519623 LINC01553A4QN01 128 aa14.27□□□□□ -0.13
CSMD1-205ENST00000519623 SPDYE3A6NKU9 549 aa14.27□□□□□ -0.13
CSMD1-205ENST00000519623 MAFGO15525 162 aa14.27□□□□□ -0.13
CSMD1-205ENST00000519623 GTPBP6O43824 516 aaPredicted RBP14.27□□□□□ -0.13
CSMD1-205ENST00000519623 TCF7P36402 384 aaPredicted RBP14.27□□□□□ -0.13
CSMD1-205ENST00000519623 ERVK-21P61565 698 aa14.27□□□□□ -0.13
CSMD1-205ENST00000519623 FAM26DQ5JW98 314 aa14.27□□□□□ -0.13
CSMD1-205ENST00000519623 WWC2Q6AWC2 1192 aa14.27□□□□□ -0.13
CSMD1-205ENST00000519623 FAM117BQ6P1L5 589 aa14.27□□□□□ -0.13
CSMD1-205ENST00000519623 LMBR1Q8WVP7 490 aa14.27□□□□□ -0.13
CSMD1-205ENST00000519623 SEPT1Q8WYJ6 367 aa14.27□□□□□ -0.13
CSMD1-205ENST00000519623 TSPYL2Q9H2G4 693 aaPredicted RBP14.27□□□□□ -0.13
CSMD1-205ENST00000519623 RBM28Q9NW13 759 aaKnown RBP14.27□□□□□ -0.13
CSMD1-205ENST00000519623 ZNF215Q9UL58 517 aaPredicted RBP14.27□□□□□ -0.13
CSMD1-205ENST00000519623 V9GY48 417 aaPredicted RBP14.27□□□□□ -0.13
CSMD1-205ENST00000519623 MICAL3Q7RTP6 2002 aa14.27□□□□□ -0.13
CSMD1-205ENST00000519623 BDP1A6H8Y1 2624 aa14.27□□□□□ -0.13
CSMD1-205ENST00000519623 MUC3AQ02505 3323 aa14.26□□□□□ -0.13
CSMD1-205ENST00000519623 NRCAMQ92823 1304 aa14.26□□□□□ -0.13
CSMD1-205ENST00000519623 TCF20Q9UGU0 1960 aaKnown RBP14.26□□□□□ -0.13
CSMD1-205ENST00000519623 ZBTB43O43298 467 aa14.26□□□□□ -0.13
CSMD1-205ENST00000519623 BMP1P13497 986 aa14.26□□□□□ -0.13
CSMD1-205ENST00000519623 HTRA4P83105 476 aaPredicted RBP14.26□□□□□ -0.13
CSMD1-205ENST00000519623 ARHGAP4P98171 946 aa14.26□□□□□ -0.13
CSMD1-205ENST00000519623 TFF2Q03403 129 aa14.26□□□□□ -0.13
CSMD1-205ENST00000519623 MTMR1Q13613 665 aa14.26□□□□□ -0.13
CSMD1-205ENST00000519623 RTN1Q16799 776 aa14.26□□□□□ -0.13
CSMD1-205ENST00000519623 CYP2W1Q8TAV3 490 aa14.26□□□□□ -0.13
CSMD1-205ENST00000519623 KCNB2Q92953 911 aa14.26□□□□□ -0.13
CSMD1-205ENST00000519623 SUGCTQ9HAC7 445 aa14.26□□□□□ -0.13
CSMD1-205ENST00000519623 RIC8AQ9NPQ8 531 aa14.26□□□□□ -0.13
CSMD1-205ENST00000519623 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.25□□□□□ -0.13
CSMD1-205ENST00000519623 TNFRSF10AO00220 468 aa14.25□□□□□ -0.13
CSMD1-205ENST00000519623 CDC45O75419 566 aa14.25□□□□□ -0.13
CSMD1-205ENST00000519623 CHRNA1P02708 482 aa14.25□□□□□ -0.13
CSMD1-205ENST00000519623 AMHP03971 560 aa14.25□□□□□ -0.13
CSMD1-205ENST00000519623 CTSHP09668 335 aa14.25□□□□□ -0.13
CSMD1-205ENST00000519623 CDC27P30260 824 aa14.25□□□□□ -0.13
CSMD1-205ENST00000519623 KRT32Q14532 448 aa14.25□□□□□ -0.13
CSMD1-205ENST00000519623 RUFY4Q6ZNE9 571 aa14.25□□□□□ -0.13
CSMD1-205ENST00000519623 RPAINQ86UA6 219 aa14.25□□□□□ -0.13
CSMD1-205ENST00000519623 TEX2Q8IWB9 1127 aa14.25□□□□□ -0.13
CSMD1-205ENST00000519623 ADAMTS19Q8TE59 1207 aa14.25□□□□□ -0.13
CSMD1-205ENST00000519623 SEPT8Q92599 483 aa14.25□□□□□ -0.13
CSMD1-205ENST00000519623 TGS1Q96RS0 853 aaKnown RBP14.25□□□□□ -0.13
CSMD1-205ENST00000519623 PCYT2Q99447 389 aa14.25□□□□□ -0.13
CSMD1-205ENST00000519623 MXRA8Q9BRK3 442 aa14.25□□□□□ -0.13
CSMD1-205ENST00000519623 KCNH7Q9NS40 1196 aa14.25□□□□□ -0.13
CSMD1-205ENST00000519623 LMCD1Q9NZU5 365 aa14.25□□□□□ -0.13
CSMD1-205ENST00000519623 PKD2L1Q9P0L9 805 aa14.25□□□□□ -0.13
CSMD1-205ENST00000519623 INSL6Q9Y581 213 aa14.25□□□□□ -0.13
CSMD1-205ENST00000519623 BRWD1Q9NSI6 2320 aa14.25□□□□□ -0.13
CSMD1-205ENST00000519623 MBLAC1A4D2B0 266 aaPredicted RBP14.24□□□□□ -0.13
CSMD1-205ENST00000519623 STXBP3O00186 592 aa14.24□□□□□ -0.13
CSMD1-205ENST00000519623 FOSP01100 380 aaPredicted RBP14.24□□□□□ -0.13
CSMD1-205ENST00000519623 ARP10275 920 aa14.24□□□□□ -0.13
CSMD1-205ENST00000519623 NAPAP54920 295 aa14.24□□□□□ -0.13
CSMD1-205ENST00000519623 SKIV2LQ15477 1246 aaKnown RBP14.24□□□□□ -0.13
CSMD1-205ENST00000519623 MARCH8Q5T0T0 291 aa14.24□□□□□ -0.13
CSMD1-205ENST00000519623 MYOCDQ8IZQ8 938 aa14.24□□□□□ -0.13
CSMD1-205ENST00000519623 SP7Q8TDD2 431 aaPredicted RBP14.24□□□□□ -0.13
CSMD1-205ENST00000519623 TOP1MTQ969P6 601 aa14.24□□□□□ -0.13
CSMD1-205ENST00000519623 SMARCAD1Q9H4L7 1026 aa14.24□□□□□ -0.13
CSMD1-205ENST00000519623 BARHL2Q9NY43 387 aa14.24□□□□□ -0.13
CSMD1-205ENST00000519623 ERAP1Q9NZ08 941 aa14.24□□□□□ -0.13
CSMD1-205ENST00000519623 MTUS1Q9ULD2 1270 aa14.24□□□□□ -0.13
CSMD1-205ENST00000519623 XIRP2A4UGR9 3374 aa14.23□□□□□ -0.13
CSMD1-205ENST00000519623 KLF18A0A0U1RQI7 1052 aa14.23□□□□□ -0.13
CSMD1-205ENST00000519623 SMCO2A6NFE2 343 aa14.23□□□□□ -0.13
CSMD1-205ENST00000519623 MEIS1O00470 390 aa14.23□□□□□ -0.13
CSMD1-205ENST00000519623 HMGB1P09429 215 aaKnown RBP14.23□□□□□ -0.13
CSMD1-205ENST00000519623 CPA1P15085 419 aa14.23□□□□□ -0.13
CSMD1-205ENST00000519623 MARK3P27448 753 aa14.23□□□□□ -0.13
CSMD1-205ENST00000519623 ADD1P35611 737 aaKnown RBP14.23□□□□□ -0.13
CSMD1-205ENST00000519623 CLK2P49760 499 aaKnown RBP14.23□□□□□ -0.13
CSMD1-205ENST00000519623 RCAN1P53805 252 aa14.23□□□□□ -0.13
CSMD1-205ENST00000519623 PPFIA1Q13136 1202 aa14.23□□□□□ -0.13
CSMD1-205ENST00000519623 GRIK4Q16099 956 aa14.23□□□□□ -0.13
CSMD1-205ENST00000519623 PPP1R18Q6NYC8 613 aa14.23□□□□□ -0.13
CSMD1-205ENST00000519623 TAF2Q6P1X5 1199 aa14.23□□□□□ -0.13
CSMD1-205ENST00000519623 GDPD5Q8WTR4 605 aa14.23□□□□□ -0.13
CSMD1-205ENST00000519623 GLG1Q92896 1179 aa14.23□□□□□ -0.13
CSMD1-205ENST00000519623 PGBD1Q96JS3 809 aa14.23□□□□□ -0.13
CSMD1-205ENST00000519623 EHMT1Q9H9B1 1298 aa14.23□□□□□ -0.13
CSMD1-205ENST00000519623 SIP14410 1827 aa14.22□□□□□ -0.13
CSMD1-205ENST00000519623 NFASCO94856 1347 aa14.22□□□□□ -0.13
CSMD1-205ENST00000519623 GOLGA8AA7E2F4 631 aa14.22□□□□□ -0.13
CSMD1-205ENST00000519623 GOLGA8BA8MQT2 603 aa14.22□□□□□ -0.13
CSMD1-205ENST00000519623 hCG_1984214I3L0E3 225 aa14.22□□□□□ -0.13
CSMD1-205ENST00000519623 INSRRP14616 1297 aa14.22□□□□□ -0.13
CSMD1-205ENST00000519623 KCNQ1P51787 676 aa14.22□□□□□ -0.13
CSMD1-205ENST00000519623 ADCY7P51828 1080 aa14.22□□□□□ -0.13
CSMD1-205ENST00000519623 MGAT3Q09327 533 aa14.22□□□□□ -0.13
CSMD1-205ENST00000519623 ITGB3BPQ13352 177 aaPredicted RBP14.22□□□□□ -0.13
CSMD1-205ENST00000519623 AAK1Q2M2I8 961 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms