RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 ARHGAP4P98171 946 aa13.57□□□□□ -0.24
TMEM55A-202ENST00000518359 TCF15Q12870 199 aa13.57□□□□□ -0.24
TMEM55A-202ENST00000518359 NEDD9Q14511 834 aa13.57□□□□□ -0.24
TMEM55A-202ENST00000518359 NAALADL2Q58DX5 795 aa13.57□□□□□ -0.24
TMEM55A-202ENST00000518359 METTL7BQ6UX53 244 aa13.57□□□□□ -0.24
TMEM55A-202ENST00000518359 RSPH3Q86UC2 560 aa13.57□□□□□ -0.24
TMEM55A-202ENST00000518359 MSLNLQ96KJ4 702 aa13.57□□□□□ -0.24
TMEM55A-202ENST00000518359 ZSCAN10Q96SZ4 725 aaPredicted RBP13.57□□□□□ -0.24
TMEM55A-202ENST00000518359 OSBPL7Q9BZF2 842 aa13.57□□□□□ -0.24
TMEM55A-202ENST00000518359 RC3H2Q9HBD1 1191 aaKnown RBP13.57□□□□□ -0.24
TMEM55A-202ENST00000518359 PCDHA1Q9Y5I3 950 aa13.57□□□□□ -0.24
TMEM55A-202ENST00000518359 SALL3Q9BXA9 1300 aa13.57□□□□□ -0.24
TMEM55A-202ENST00000518359 LOC730098B7Z3J9 87 aa13.56□□□□□ -0.24
TMEM55A-202ENST00000518359 OPLAHO14841 1288 aa13.56□□□□□ -0.24
TMEM55A-202ENST00000518359 STAM2O75886 525 aa13.56□□□□□ -0.24
TMEM55A-202ENST00000518359 GHRP10912 638 aa13.56□□□□□ -0.24
TMEM55A-202ENST00000518359 HOXA13P31271 388 aaPredicted RBP13.56□□□□□ -0.24
TMEM55A-202ENST00000518359 SIGLEC14Q08ET2 396 aa13.56□□□□□ -0.24
TMEM55A-202ENST00000518359 COASYQ13057 564 aa13.56□□□□□ -0.24
TMEM55A-202ENST00000518359 NMIQ13287 307 aaPredicted RBP13.56□□□□□ -0.24
TMEM55A-202ENST00000518359 TAF2Q6P1X5 1199 aa13.56□□□□□ -0.24
TMEM55A-202ENST00000518359 ZNF589Q86UQ0 364 aaPredicted RBP13.56□□□□□ -0.24
TMEM55A-202ENST00000518359 EFHBQ8N7U6 833 aa13.56□□□□□ -0.24
TMEM55A-202ENST00000518359 SMRP1Q8NCR6 262 aa13.56□□□□□ -0.24
TMEM55A-202ENST00000518359 IL31RAQ8NI17 732 aa13.56□□□□□ -0.24
TMEM55A-202ENST00000518359 LMBR1Q8WVP7 490 aa13.56□□□□□ -0.24
TMEM55A-202ENST00000518359 ALG13Q9NP73 1137 aaKnown RBP13.56□□□□□ -0.24
TMEM55A-202ENST00000518359 PLAGL2Q9UPG8 496 aa13.56□□□□□ -0.24
TMEM55A-202ENST00000518359 NRCAMQ92823 1304 aa13.56□□□□□ -0.24
TMEM55A-202ENST00000518359 PLXNA4Q9HCM2 1894 aa13.55□□□□□ -0.24
TMEM55A-202ENST00000518359 LOXHD1Q8IVV2 1947 aa13.55□□□□□ -0.24
TMEM55A-202ENST00000518359 GCOM1H8Y6P7 765 aaPredicted RBP13.55□□□□□ -0.24
TMEM55A-202ENST00000518359 ZBTB5O15062 677 aa13.55□□□□□ -0.24
TMEM55A-202ENST00000518359 POLR2MP0CAP2 368 aa13.55□□□□□ -0.24
TMEM55A-202ENST00000518359 RRP1P56182 461 aaKnown RBP13.55□□□□□ -0.24
TMEM55A-202ENST00000518359 CBX2Q14781 532 aaPredicted RBP13.55□□□□□ -0.24
TMEM55A-202ENST00000518359 FCHSD1Q86WN1 690 aa13.55□□□□□ -0.24
TMEM55A-202ENST00000518359 ENAHQ8N8S7 591 aaPredicted RBP13.55□□□□□ -0.24
TMEM55A-202ENST00000518359 GPKOWQ92917 476 aaPredicted RBP eCLIP13.55□□□□□ -0.24
TMEM55A-202ENST00000518359 ZNF689Q96CS4 500 aaPredicted RBP13.55□□□□□ -0.24
TMEM55A-202ENST00000518359 UBAC1Q9BSL1 405 aa13.55□□□□□ -0.24
TMEM55A-202ENST00000518359 EHMT1Q9H9B1 1298 aa13.55□□□□□ -0.24
TMEM55A-202ENST00000518359 ZFHX2Q9C0A1 2572 aaPredicted RBP13.54□□□□□ -0.24
TMEM55A-202ENST00000518359 FSD2A1L4K1 749 aa13.54□□□□□ -0.24
TMEM55A-202ENST00000518359 DGKIO75912 1065 aa13.54□□□□□ -0.24
TMEM55A-202ENST00000518359 CHRNA1P02708 482 aa13.54□□□□□ -0.24
TMEM55A-202ENST00000518359 ICAM3P32942 547 aa13.54□□□□□ -0.24
TMEM55A-202ENST00000518359 ADAM17P78536 824 aa13.54□□□□□ -0.24
TMEM55A-202ENST00000518359 CYFIP1Q7L576 1253 aa13.54□□□□□ -0.24
TMEM55A-202ENST00000518359 TRIM50Q86XT4 487 aa13.54□□□□□ -0.24
TMEM55A-202ENST00000518359 CMTR2Q8IYT2 770 aaKnown RBP13.54□□□□□ -0.24
TMEM55A-202ENST00000518359 ATOH1Q92858 354 aaPredicted RBP13.54□□□□□ -0.24
TMEM55A-202ENST00000518359 GPR20Q99678 358 aa13.54□□□□□ -0.24
TMEM55A-202ENST00000518359 PHF7Q9BWX1 381 aaPredicted RBP13.54□□□□□ -0.24
TMEM55A-202ENST00000518359 CLEC1BQ9P126 229 aa13.54□□□□□ -0.24
TMEM55A-202ENST00000518359 B4E1Z4 1266 aa13.53□□□□□ -0.24
TMEM55A-202ENST00000518359 KLRF2D3W0D1 207 aa13.53□□□□□ -0.24
TMEM55A-202ENST00000518359 ENPP3O14638 875 aa13.53□□□□□ -0.24
TMEM55A-202ENST00000518359 FIBPO43427 364 aa13.53□□□□□ -0.24
TMEM55A-202ENST00000518359 RPLP2P05387 115 aaKnown RBP13.53□□□□□ -0.24
TMEM55A-202ENST00000518359 NRIP1P48552 1158 aa13.53□□□□□ -0.24
TMEM55A-202ENST00000518359 PDE1AP54750 535 aa13.53□□□□□ -0.24
TMEM55A-202ENST00000518359 CAMK1Q14012 370 aa13.53□□□□□ -0.24
TMEM55A-202ENST00000518359 LPIN1Q14693 890 aa13.53□□□□□ -0.24
TMEM55A-202ENST00000518359 IFIT1BQ5T764 474 aaKnown RBP13.53□□□□□ -0.24
TMEM55A-202ENST00000518359 UTP14CQ5TAP6 766 aaKnown RBP13.53□□□□□ -0.24
TMEM55A-202ENST00000518359 ANKRD45Q5TZF3 282 aa13.53□□□□□ -0.24
TMEM55A-202ENST00000518359 TSHZ1Q6ZSZ6 1077 aa13.53□□□□□ -0.24
TMEM55A-202ENST00000518359 ZFP91Q96JP5 570 aaPredicted RBP13.53□□□□□ -0.24
TMEM55A-202ENST00000518359 INPP4AQ96PE3 977 aaPredicted RBP13.53□□□□□ -0.24
TMEM55A-202ENST00000518359 KRT23Q9C075 422 aa13.53□□□□□ -0.24
TMEM55A-202ENST00000518359 FAM86C1Q9NVL1 165 aa13.53□□□□□ -0.24
TMEM55A-202ENST00000518359 USP15Q9Y4E8 981 aaPredicted RBP13.53□□□□□ -0.24
TMEM55A-202ENST00000518359 MRPL42Q9Y6G3 142 aaKnown RBP13.53□□□□□ -0.24
TMEM55A-202ENST00000518359 CACNA1HO95180 2353 aa13.53□□□□□ -0.24
TMEM55A-202ENST00000518359 SPTBN4Q9H254 2564 aa13.53□□□□□ -0.24
TMEM55A-202ENST00000518359 PLXNA3P51805 1871 aa13.53□□□□□ -0.24
TMEM55A-202ENST00000518359 SPATA31C2B4DYI2 1134 aa13.52□□□□□ -0.25
TMEM55A-202ENST00000518359 PPP1R11O60927 126 aaPredicted RBP13.52□□□□□ -0.25
TMEM55A-202ENST00000518359 ITGB1P05556 798 aa13.52□□□□□ -0.25
TMEM55A-202ENST00000518359 STAG3L1P0CL83 205 aa13.52□□□□□ -0.25
TMEM55A-202ENST00000518359 ATF7P17544 494 aaPredicted RBP13.52□□□□□ -0.25
TMEM55A-202ENST00000518359 NUBP1P53384 320 aa13.52□□□□□ -0.25
TMEM55A-202ENST00000518359 FBXO47Q5MNV8 452 aa13.52□□□□□ -0.25
TMEM55A-202ENST00000518359 ADGRD2Q7Z7M1 963 aa13.52□□□□□ -0.25
TMEM55A-202ENST00000518359 HOMER1Q86YM7 354 aa13.52□□□□□ -0.25
TMEM55A-202ENST00000518359 NPAS4Q8IUM7 802 aa13.52□□□□□ -0.25
TMEM55A-202ENST00000518359 STAG2Q8N3U4 1231 aa13.52□□□□□ -0.25
TMEM55A-202ENST00000518359 KLHL23Q8NBE8 558 aa13.52□□□□□ -0.25
TMEM55A-202ENST00000518359 GIMAP8Q8ND71 665 aaPredicted RBP13.52□□□□□ -0.25
TMEM55A-202ENST00000518359 SPPL3Q8TCT6 385 aa13.52□□□□□ -0.25
TMEM55A-202ENST00000518359 POF1BQ8WVV4 589 aa13.52□□□□□ -0.25
TMEM55A-202ENST00000518359 MTMR8Q96EF0 704 aa13.52□□□□□ -0.25
TMEM55A-202ENST00000518359 RPGRIP1Q96KN7 1286 aa13.52□□□□□ -0.25
TMEM55A-202ENST00000518359 FTHL17Q9BXU8 183 aa13.52□□□□□ -0.25
TMEM55A-202ENST00000518359 BCAS3Q9H6U6 928 aa13.52□□□□□ -0.25
TMEM55A-202ENST00000518359 CNNM2Q9H8M5 875 aa13.52□□□□□ -0.25
TMEM55A-202ENST00000518359 ZSWIM5Q9P217 1185 aa13.52□□□□□ -0.25
TMEM55A-202ENST00000518359 TUBE1Q9UJT0 475 aa13.52□□□□□ -0.25
TMEM55A-202ENST00000518359 BARX2Q9UMQ3 279 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms