RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 ATL3Q6DD88 541 aa14.68□□□□□ -0.06
PABPC1-205ENST00000518196 SLFN12Q8IYM2 578 aa14.68□□□□□ -0.06
PABPC1-205ENST00000518196 LENG9Q96B70 501 aa14.68□□□□□ -0.06
PABPC1-205ENST00000518196 FAM20AQ96MK3 541 aa14.68□□□□□ -0.06
PABPC1-205ENST00000518196 AP5M1Q9H0R1 490 aa14.68□□□□□ -0.06
PABPC1-205ENST00000518196 SPC25Q9HBM1 224 aa14.68□□□□□ -0.06
PABPC1-205ENST00000518196 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.68□□□□□ -0.06
PABPC1-205ENST00000518196 TBC1D22BQ9NU19 505 aa14.68□□□□□ -0.06
PABPC1-205ENST00000518196 PKD2L1Q9P0L9 805 aa14.68□□□□□ -0.06
PABPC1-205ENST00000518196 GNEQ9Y223 722 aaKnown RBP14.68□□□□□ -0.06
PABPC1-205ENST00000518196 NFASCO94856 1347 aa14.67□□□□□ -0.06
PABPC1-205ENST00000518196 LAD1O00515 517 aa14.67□□□□□ -0.06
PABPC1-205ENST00000518196 WNT7AO00755 349 aa14.67□□□□□ -0.06
PABPC1-205ENST00000518196 DYNC1LI2O43237 492 aaPredicted RBP14.67□□□□□ -0.06
PABPC1-205ENST00000518196 ATP9AO75110 1047 aa14.67□□□□□ -0.06
PABPC1-205ENST00000518196 GGPS1O95749 300 aa14.67□□□□□ -0.06
PABPC1-205ENST00000518196 KCNA2P16389 499 aa14.67□□□□□ -0.06
PABPC1-205ENST00000518196 UBA1P22314 1058 aaKnown RBP14.67□□□□□ -0.06
PABPC1-205ENST00000518196 SP2Q02086 613 aa14.67□□□□□ -0.06
PABPC1-205ENST00000518196 LAMC2Q13753 1193 aa14.67□□□□□ -0.06
PABPC1-205ENST00000518196 TSR1Q2NL82 804 aaKnown RBP14.67□□□□□ -0.06
PABPC1-205ENST00000518196 CELF3Q5SZQ8 465 aaKnown RBP14.67□□□□□ -0.06
PABPC1-205ENST00000518196 ANO1Q5XXA6 986 aa14.67□□□□□ -0.06
PABPC1-205ENST00000518196 FAM173BQ6P4H8 233 aa14.67□□□□□ -0.06
PABPC1-205ENST00000518196 CYFIP1Q7L576 1253 aa14.67□□□□□ -0.06
PABPC1-205ENST00000518196 TLK2Q86UE8 772 aa14.67□□□□□ -0.06
PABPC1-205ENST00000518196 OR6J1Q8NGC5 347 aa14.67□□□□□ -0.06
PABPC1-205ENST00000518196 COPS5Q92905 334 aa14.67□□□□□ -0.06
PABPC1-205ENST00000518196 RIT2Q99578 217 aa14.67□□□□□ -0.06
PABPC1-205ENST00000518196 TEKT3Q9BXF9 490 aa14.67□□□□□ -0.06
PABPC1-205ENST00000518196 KCNMB3Q9NPA1 279 aa14.67□□□□□ -0.06
PABPC1-205ENST00000518196 DOCK5Q9H7D0 1870 aa14.66□□□□□ -0.06
PABPC1-205ENST00000518196 GAS7O60861 476 aa14.66□□□□□ -0.06
PABPC1-205ENST00000518196 OR52Z1P0C646 297 aa14.66□□□□□ -0.06
PABPC1-205ENST00000518196 PTGDRQ13258 359 aa14.66□□□□□ -0.06
PABPC1-205ENST00000518196 SF3A1Q15459 793 aaKnown RBP14.66□□□□□ -0.06
PABPC1-205ENST00000518196 FOXD4L6Q3SYB3 417 aaPredicted RBP14.66□□□□□ -0.06
PABPC1-205ENST00000518196 BRDTQ58F21 947 aaPredicted RBP14.66□□□□□ -0.06
PABPC1-205ENST00000518196 GJC2Q5T442 439 aaPredicted RBP14.66□□□□□ -0.06
PABPC1-205ENST00000518196 LRCH2Q5VUJ6 765 aa14.66□□□□□ -0.06
PABPC1-205ENST00000518196 FOXD4L3Q6VB84 417 aaPredicted RBP14.66□□□□□ -0.06
PABPC1-205ENST00000518196 ETNPPLQ8TBG4 499 aa14.66□□□□□ -0.06
PABPC1-205ENST00000518196 SLC5A5Q92911 643 aa14.66□□□□□ -0.06
PABPC1-205ENST00000518196 UIMC1Q96RL1 719 aa14.66□□□□□ -0.06
PABPC1-205ENST00000518196 PAK6Q9NQU5 681 aaPredicted RBP14.66□□□□□ -0.06
PABPC1-205ENST00000518196 SLC9A2Q9UBY0 812 aa14.66□□□□□ -0.06
PABPC1-205ENST00000518196 CFAP45Q9UL16 551 aa14.66□□□□□ -0.06
PABPC1-205ENST00000518196 LHX6Q9UPM6 363 aa14.66□□□□□ -0.06
PABPC1-205ENST00000518196 DDX39AO00148 427 aaKnown RBP14.65□□□□□ -0.06
PABPC1-205ENST00000518196 NOP56O00567 594 aaKnown RBP14.65□□□□□ -0.06
PABPC1-205ENST00000518196 ADCY6O43306 1168 aa14.65□□□□□ -0.06
PABPC1-205ENST00000518196 SORBS3O60504 671 aa14.65□□□□□ -0.06
PABPC1-205ENST00000518196 FARP2O94887 1054 aaPredicted RBP14.65□□□□□ -0.06
PABPC1-205ENST00000518196 CAPN2P17655 700 aa14.65□□□□□ -0.06
PABPC1-205ENST00000518196 GJA9P57773 515 aa14.65□□□□□ -0.06
PABPC1-205ENST00000518196 CEBPZQ03701 1054 aaKnown RBP14.65□□□□□ -0.06
PABPC1-205ENST00000518196 ARHGAP1Q07960 439 aa14.65□□□□□ -0.06
PABPC1-205ENST00000518196 ITGB3BPQ13352 177 aaPredicted RBP14.65□□□□□ -0.06
PABPC1-205ENST00000518196 TMEM266Q2M3C6 531 aa14.65□□□□□ -0.06
PABPC1-205ENST00000518196 TMEM63BQ5T3F8 832 aa14.65□□□□□ -0.06
PABPC1-205ENST00000518196 COL13A1Q5TAT6 717 aaPredicted RBP14.65□□□□□ -0.06
PABPC1-205ENST00000518196 METTL7BQ6UX53 244 aa14.65□□□□□ -0.06
PABPC1-205ENST00000518196 HAS1Q92839 578 aa14.65□□□□□ -0.06
PABPC1-205ENST00000518196 EMID1Q96A84 441 aaPredicted RBP14.65□□□□□ -0.06
PABPC1-205ENST00000518196 LENG1Q96BZ8 264 aaPredicted RBP14.65□□□□□ -0.06
PABPC1-205ENST00000518196 SPATA33Q96N06 139 aa14.65□□□□□ -0.06
PABPC1-205ENST00000518196 DEFB118Q96PH6 123 aa14.65□□□□□ -0.06
PABPC1-205ENST00000518196 MTMR9Q96QG7 549 aa14.65□□□□□ -0.06
PABPC1-205ENST00000518196 USP28Q96RU2 1077 aa14.65□□□□□ -0.06
PABPC1-205ENST00000518196 TMEM60Q9H2L4 133 aa14.65□□□□□ -0.06
PABPC1-205ENST00000518196 JPH1Q9HDC5 661 aaPredicted RBP14.65□□□□□ -0.06
PABPC1-205ENST00000518196 XPNPEP3Q9NQH7 507 aa14.65□□□□□ -0.06
PABPC1-205ENST00000518196 POLR3EQ9NVU0 708 aa14.65□□□□□ -0.06
PABPC1-205ENST00000518196 TFIP11Q9UBB9 837 aaKnown RBP14.65□□□□□ -0.06
PABPC1-205ENST00000518196 CLIC4Q9Y696 253 aa14.65□□□□□ -0.06
PABPC1-205ENST00000518196 DHX15O43143 795 aaKnown RBP14.64□□□□□ -0.07
PABPC1-205ENST00000518196 ZEB2O60315 1214 aa14.64□□□□□ -0.07
PABPC1-205ENST00000518196 PSMD10O75832 226 aa14.64□□□□□ -0.07
PABPC1-205ENST00000518196 GJB1P08034 283 aa14.64□□□□□ -0.07
PABPC1-205ENST00000518196 C6orf222P0C671 652 aaPredicted RBP14.64□□□□□ -0.07
PABPC1-205ENST00000518196 PRPHP41219 470 aa14.64□□□□□ -0.07
PABPC1-205ENST00000518196 TXKP42681 527 aa14.64□□□□□ -0.07
PABPC1-205ENST00000518196 CPT1AP50416 773 aa14.64□□□□□ -0.07
PABPC1-205ENST00000518196 ATP2C1P98194 919 aaPredicted RBP14.64□□□□□ -0.07
PABPC1-205ENST00000518196 KRT76Q01546 638 aa14.64□□□□□ -0.07
PABPC1-205ENST00000518196 STK38Q15208 465 aa14.64□□□□□ -0.07
PABPC1-205ENST00000518196 RNF180Q86T96 592 aa14.64□□□□□ -0.07
PABPC1-205ENST00000518196 C4orf32Q8N8J7 132 aa14.64□□□□□ -0.07
PABPC1-205ENST00000518196 ARRDC4Q8NCT1 418 aa14.64□□□□□ -0.07
PABPC1-205ENST00000518196 UPF3AQ9H1J1 476 aaKnown RBP14.64□□□□□ -0.07
PABPC1-205ENST00000518196 PCDHA12Q9UN75 941 aa14.64□□□□□ -0.07
PABPC1-205ENST00000518196 TCHHQ07283 1943 aa14.64□□□□□ -0.07
PABPC1-205ENST00000518196 SYNRGQ9UMZ2 1314 aa14.64□□□□□ -0.07
PABPC1-205ENST00000518196 SGPL1O95470 568 aa14.63□□□□□ -0.07
PABPC1-205ENST00000518196 PGK1P00558 417 aa14.63□□□□□ -0.07
PABPC1-205ENST00000518196 TFRCP02786 760 aaKnown RBP14.63□□□□□ -0.07
PABPC1-205ENST00000518196 NCLP19338 710 aaKnown RBP14.63□□□□□ -0.07
PABPC1-205ENST00000518196 NKX3-2P78367 333 aa14.63□□□□□ -0.07
PABPC1-205ENST00000518196 KRT85P78386 507 aa14.63□□□□□ -0.07
PABPC1-205ENST00000518196 SP4Q02446 784 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms