RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 TMTC1Q8IUR5 882 aa29.44■■■□□ 2.3
COL13A1-210ENST00000517713 TPH2Q8IWU9 490 aa29.44■■■□□ 2.3
COL13A1-210ENST00000517713 DESI2Q9BSY9 194 aa29.44■■■□□ 2.3
COL13A1-210ENST00000517713 TEKT3Q9BXF9 490 aa29.44■■■□□ 2.3
COL13A1-210ENST00000517713 ZHX2Q9Y6X8 837 aa29.44■■■□□ 2.3
COL13A1-210ENST00000517713 IPO5O00410 1097 aaKnown RBP29.44■■■□□ 2.3
COL13A1-210ENST00000517713 VWA5AO00534 786 aa29.44■■■□□ 2.3
COL13A1-210ENST00000517713 ITGB5P18084 799 aa29.44■■■□□ 2.3
COL13A1-210ENST00000517713 FKBP15Q5T1M5 1219 aa29.44■■■□□ 2.3
COL13A1-210ENST00000517713 SYTL5Q8TDW5 730 aaPredicted RBP29.44■■■□□ 2.3
COL13A1-210ENST00000517713 SCFD1Q8WVM8 642 aa29.44■■■□□ 2.3
COL13A1-210ENST00000517713 KLRG1Q96E93 195 aa29.44■■■□□ 2.3
COL13A1-210ENST00000517713 UNC45AQ9H3U1 944 aa29.44■■■□□ 2.3
COL13A1-210ENST00000517713 CAPN11Q9UMQ6 739 aa29.44■■■□□ 2.3
COL13A1-210ENST00000517713 NKRFO15226 690 aaKnown RBP eCLIP29.43■■■□□ 2.3
COL13A1-210ENST00000517713 BCRP11274 1271 aa29.43■■■□□ 2.3
COL13A1-210ENST00000517713 FKBP3Q00688 224 aaKnown RBP29.43■■■□□ 2.3
COL13A1-210ENST00000517713 VWA3BQ502W6 1294 aa29.43■■■□□ 2.3
COL13A1-210ENST00000517713 TRIM65Q6PJ69 517 aa29.43■■■□□ 2.3
COL13A1-210ENST00000517713 RIT2Q99578 217 aa29.43■■■□□ 2.3
COL13A1-210ENST00000517713 NUP58Q9BVL2 599 aa29.43■■■□□ 2.3
COL13A1-210ENST00000517713 LUC7L2Q9Y383 392 aaKnown RBP29.43■■■□□ 2.3
COL13A1-210ENST00000517713 RBBP6Q7Z6E9 1792 aaKnown RBP29.42■■■□□ 2.3
COL13A1-210ENST00000517713 CCDC175P0C221 793 aa29.42■■■□□ 2.3
COL13A1-210ENST00000517713 MUTP22033 750 aa29.42■■■□□ 2.3
COL13A1-210ENST00000517713 SYCP1Q15431 976 aa29.42■■■□□ 2.3
COL13A1-210ENST00000517713 CYP26C1Q6V0L0 522 aa29.42■■■□□ 2.3
COL13A1-210ENST00000517713 NIPA1Q7RTP0 329 aa29.42■■■□□ 2.3
COL13A1-210ENST00000517713 NELFCDQ8IXH7 590 aa29.42■■■□□ 2.3
COL13A1-210ENST00000517713 ATG4CQ96DT6 458 aa29.42■■■□□ 2.3
COL13A1-210ENST00000517713 ERGIC2Q96RQ1 377 aa29.42■■■□□ 2.3
COL13A1-210ENST00000517713 MAN2A1Q16706 1144 aa29.42■■■□□ 2.3
COL13A1-210ENST00000517713 PCNX4Q63HM2 1172 aa29.42■■■□□ 2.3
COL13A1-210ENST00000517713 B3GNT9Q6UX72 402 aa29.42■■■□□ 2.3
COL13A1-210ENST00000517713 RETREG2Q8NC44 543 aa29.42■■■□□ 2.3
COL13A1-210ENST00000517713 IL31RAQ8NI17 732 aa29.42■■■□□ 2.3
COL13A1-210ENST00000517713 PIGOQ8TEQ8 1089 aa29.42■■■□□ 2.3
COL13A1-210ENST00000517713 C12orf42Q96LP6 360 aa29.42■■■□□ 2.3
COL13A1-210ENST00000517713 TRERF1Q96PN7 1200 aa29.42■■■□□ 2.3
COL13A1-210ENST00000517713 RUSC1Q9BVN2 902 aa29.42■■■□□ 2.3
COL13A1-210ENST00000517713 ADGRG1Q9Y653 693 aa29.42■■■□□ 2.3
COL13A1-210ENST00000517713 PARP14Q460N5 1801 aa29.41■■■□□ 2.3
COL13A1-210ENST00000517713 C19orf81C9J6K1 198 aa29.41■■■□□ 2.3
COL13A1-210ENST00000517713 TRAF5O00463 557 aa29.41■■■□□ 2.3
COL13A1-210ENST00000517713 HMGCS2P54868 508 aa29.41■■■□□ 2.3
COL13A1-210ENST00000517713 EPHA7Q15375 998 aa29.41■■■□□ 2.3
COL13A1-210ENST00000517713 OR8K1Q8NGG5 319 aa29.41■■■□□ 2.3
COL13A1-210ENST00000517713 KCTD10Q9H3F6 313 aa29.41■■■□□ 2.3
COL13A1-210ENST00000517713 NDST4Q9H3R1 872 aa29.41■■■□□ 2.3
COL13A1-210ENST00000517713 SPON1Q9HCB6 807 aa29.41■■■□□ 2.3
COL13A1-210ENST00000517713 RPS6P62753 249 aaKnown RBP29.4■■■□□ 2.3
COL13A1-210ENST00000517713 ERVK-24P63145 666 aa29.4■■■□□ 2.3
COL13A1-210ENST00000517713 SUPT20HL1Q3ZLR7 823 aa29.4■■■□□ 2.3
COL13A1-210ENST00000517713 SFR1Q86XK3 245 aa29.4■■■□□ 2.3
COL13A1-210ENST00000517713 CTIFO43310 598 aaKnown RBP29.4■■■□□ 2.3
COL13A1-210ENST00000517713 RINT1Q6NUQ1 792 aa29.4■■■□□ 2.3
COL13A1-210ENST00000517713 WNK4Q96J92 1243 aa29.4■■■□□ 2.3
COL13A1-210ENST00000517713 CEP63Q96MT8 703 aa29.4■■■□□ 2.3
COL13A1-210ENST00000517713 TAAR1Q96RJ0 339 aa29.4■■■□□ 2.3
COL13A1-210ENST00000517713 DNAJC7Q99615 494 aa29.4■■■□□ 2.3
COL13A1-210ENST00000517713 KCNH7Q9NS40 1196 aa29.4■■■□□ 2.3
COL13A1-210ENST00000517713 DNAI1Q9UI46 699 aa29.4■■■□□ 2.3
COL13A1-210ENST00000517713 UBIAD1Q9Y5Z9 338 aa29.4■■■□□ 2.3
COL13A1-210ENST00000517713 FRMPD4Q14CM0 1322 aa29.4■■■□□ 2.3
COL13A1-210ENST00000517713 PHLPP2Q6ZVD8 1323 aa29.4■■■□□ 2.3
COL13A1-210ENST00000517713 SSC5DA1L4H1 1573 aa29.39■■■□□ 2.3
COL13A1-210ENST00000517713 RASSF10A6NK89 507 aa29.39■■■□□ 2.3
COL13A1-210ENST00000517713 TRIM21P19474 475 aaKnown RBP29.39■■■□□ 2.3
COL13A1-210ENST00000517713 KLK7P49862 253 aa29.39■■■□□ 2.3
COL13A1-210ENST00000517713 TSC1Q92574 1164 aa29.39■■■□□ 2.3
COL13A1-210ENST00000517713 PCMTD1Q96MG8 357 aaPredicted RBP29.39■■■□□ 2.3
COL13A1-210ENST00000517713 TTYH3Q9C0H2 523 aa29.39■■■□□ 2.3
COL13A1-210ENST00000517713 COL4A3BPQ9Y5P4 624 aa29.39■■■□□ 2.3
COL13A1-210ENST00000517713 PHIPQ8WWQ0 1821 aa29.39■■■□□ 2.3
COL13A1-210ENST00000517713 TKFCQ3LXA3 575 aa29.38■■■□□ 2.29
COL13A1-210ENST00000517713 TBCAO75347 108 aaKnown RBP29.38■■■□□ 2.29
COL13A1-210ENST00000517713 CASP5P51878 434 aa29.38■■■□□ 2.29
COL13A1-210ENST00000517713 MRPS9P82933 396 aaKnown RBP29.38■■■□□ 2.29
COL13A1-210ENST00000517713 TSR1Q2NL82 804 aaKnown RBP29.38■■■□□ 2.29
COL13A1-210ENST00000517713 NOL9Q5SY16 702 aaKnown RBP29.38■■■□□ 2.29
COL13A1-210ENST00000517713 RNF207Q6ZRF8 634 aa29.38■■■□□ 2.29
COL13A1-210ENST00000517713 NACC1Q96RE7 527 aa29.38■■■□□ 2.29
COL13A1-210ENST00000517713 JADE2Q9NQC1 790 aa29.38■■■□□ 2.29
COL13A1-210ENST00000517713 RSPH10B2B2RC85 870 aa29.37■■■□□ 2.29
COL13A1-210ENST00000517713 RSPH10BP0C881 870 aa29.37■■■□□ 2.29
COL13A1-210ENST00000517713 PPP4R3CPQ6ZMV5 832 aa29.37■■■□□ 2.29
COL13A1-210ENST00000517713 MRPL44Q9H9J2 332 aaKnown RBP29.37■■■□□ 2.29
COL13A1-210ENST00000517713 SBF1O95248 1867 aa29.37■■■□□ 2.29
COL13A1-210ENST00000517713 EIF2AK2P19525 551 aaKnown RBP29.37■■■□□ 2.29
COL13A1-210ENST00000517713 DSG3P32926 999 aa29.37■■■□□ 2.29
COL13A1-210ENST00000517713 FIGNQ5HY92 759 aa29.37■■■□□ 2.29
COL13A1-210ENST00000517713 EPM2AIP1Q7L775 607 aaPredicted RBP29.37■■■□□ 2.29
COL13A1-210ENST00000517713 AGO4Q9HCK5 861 aaKnown RBP29.37■■■□□ 2.29
COL13A1-210ENST00000517713 DDX39AO00148 427 aaKnown RBP29.36■■■□□ 2.29
COL13A1-210ENST00000517713 GNA14O95837 355 aa29.36■■■□□ 2.29
COL13A1-210ENST00000517713 PGM5Q15124 567 aa29.36■■■□□ 2.29
COL13A1-210ENST00000517713 CCDC40Q4G0X9 1142 aa29.36■■■□□ 2.29
COL13A1-210ENST00000517713 NSMFQ6X4W1 530 aa29.36■■■□□ 2.29
COL13A1-210ENST00000517713 C1orf186Q6ZWK4 172 aa29.36■■■□□ 2.29
COL13A1-210ENST00000517713 REPS2Q8NFH8 660 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms