RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 TRPV6Q9H1D0 765 aa16.53■□□□□ 0.24
SCARNA21-201ENST00000517026 H3BQV1 296 aa16.52■□□□□ 0.24
SCARNA21-201ENST00000517026 F2P00734 622 aa16.52■□□□□ 0.24
SCARNA21-201ENST00000517026 SYN1P17600 705 aa16.52■□□□□ 0.24
SCARNA21-201ENST00000517026 TCF7P36402 384 aaPredicted RBP16.52■□□□□ 0.24
SCARNA21-201ENST00000517026 GNL2Q13823 731 aaKnown RBP16.52■□□□□ 0.24
SCARNA21-201ENST00000517026 MFSD10Q14728 455 aa16.52■□□□□ 0.24
SCARNA21-201ENST00000517026 FAM47CQ5HY64 1035 aa16.52■□□□□ 0.24
SCARNA21-201ENST00000517026 MCTP1Q6DN14 999 aa16.52■□□□□ 0.24
SCARNA21-201ENST00000517026 PPP4R3AQ6IN85 833 aa16.52■□□□□ 0.24
SCARNA21-201ENST00000517026 ANKRD33Q7Z3H0 272 aa16.52■□□□□ 0.24
SCARNA21-201ENST00000517026 SH3RF1Q7Z6J0 888 aa16.52■□□□□ 0.24
SCARNA21-201ENST00000517026 ETNPPLQ8TBG4 499 aa16.52■□□□□ 0.24
SCARNA21-201ENST00000517026 SLC5A5Q92911 643 aa16.52■□□□□ 0.24
SCARNA21-201ENST00000517026 INTS4Q96HW7 963 aaKnown RBP16.52■□□□□ 0.24
SCARNA21-201ENST00000517026 TBC1D22BQ9NU19 505 aa16.52■□□□□ 0.24
SCARNA21-201ENST00000517026 NR2E3Q9Y5X4 410 aa16.52■□□□□ 0.24
SCARNA21-201ENST00000517026 HAS3O00219 553 aa16.51■□□□□ 0.23
SCARNA21-201ENST00000517026 DLL1O00548 723 aa16.51■□□□□ 0.23
SCARNA21-201ENST00000517026 GCFC2P16383 781 aaKnown RBP16.51■□□□□ 0.23
SCARNA21-201ENST00000517026 U2AF2P26368 475 aaKnown RBP eCLIP16.51■□□□□ 0.23
SCARNA21-201ENST00000517026 FAAP100Q0VG06 881 aa16.51■□□□□ 0.23
SCARNA21-201ENST00000517026 KIAA0753Q2KHM9 967 aa16.51■□□□□ 0.23
SCARNA21-201ENST00000517026 POTEDQ86YR6 584 aa16.51■□□□□ 0.23
SCARNA21-201ENST00000517026 NOSTRINQ8IVI9 506 aa16.51■□□□□ 0.23
SCARNA21-201ENST00000517026 FAM126BQ8IXS8 530 aa16.51■□□□□ 0.23
SCARNA21-201ENST00000517026 TOX2Q96NM4 488 aa16.51■□□□□ 0.23
SCARNA21-201ENST00000517026 PCYT2Q99447 389 aa16.51■□□□□ 0.23
SCARNA21-201ENST00000517026 TRMT13Q9NUP7 481 aaKnown RBP16.51■□□□□ 0.23
SCARNA21-201ENST00000517026 DNAH12Q6ZR08 3092 aa16.5■□□□□ 0.23
SCARNA21-201ENST00000517026 TRIM43BA6NCK2 446 aa16.5■□□□□ 0.23
SCARNA21-201ENST00000517026 DCDC2CA8MYV0 355 aa16.5■□□□□ 0.23
SCARNA21-201ENST00000517026 H3BRB1 525 aa16.5■□□□□ 0.23
SCARNA21-201ENST00000517026 GAS7O60861 476 aa16.5■□□□□ 0.23
SCARNA21-201ENST00000517026 LRCH2Q5VUJ6 765 aa16.5■□□□□ 0.23
SCARNA21-201ENST00000517026 HAS1Q92839 578 aa16.5■□□□□ 0.23
SCARNA21-201ENST00000517026 TRIM43Q96BQ3 446 aaPredicted RBP16.5■□□□□ 0.23
SCARNA21-201ENST00000517026 RIT2Q99578 217 aa16.5■□□□□ 0.23
SCARNA21-201ENST00000517026 NAP1L4Q99733 375 aaKnown RBP16.5■□□□□ 0.23
SCARNA21-201ENST00000517026 TUT1Q9H6E5 874 aaKnown RBP16.5■□□□□ 0.23
SCARNA21-201ENST00000517026 PRDM5Q9NQX1 630 aaPredicted RBP16.5■□□□□ 0.23
SCARNA21-201ENST00000517026 PDLIM7Q9NR12 457 aa16.5■□□□□ 0.23
SCARNA21-201ENST00000517026 HDAC6Q9UBN7 1215 aa16.5■□□□□ 0.23
SCARNA21-201ENST00000517026 MYH7BA7E2Y1 1941 aa16.49■□□□□ 0.23
SCARNA21-201ENST00000517026 CHMP2AO43633 222 aa16.49■□□□□ 0.23
SCARNA21-201ENST00000517026 B4GALT4O60513 344 aa16.49■□□□□ 0.23
SCARNA21-201ENST00000517026 LGR5O75473 907 aa16.49■□□□□ 0.23
SCARNA21-201ENST00000517026 PSMD10O75832 226 aa16.49■□□□□ 0.23
SCARNA21-201ENST00000517026 ATG7O95352 703 aa16.49■□□□□ 0.23
SCARNA21-201ENST00000517026 CD4P01730 458 aa16.49■□□□□ 0.23
SCARNA21-201ENST00000517026 CLTBP09497 229 aa16.49■□□□□ 0.23
SCARNA21-201ENST00000517026 MARK3P27448 753 aa16.49■□□□□ 0.23
SCARNA21-201ENST00000517026 HIC1Q14526 733 aa16.49■□□□□ 0.23
SCARNA21-201ENST00000517026 NBR1Q14596 966 aa16.49■□□□□ 0.23
SCARNA21-201ENST00000517026 ZNF174Q15697 407 aa16.49■□□□□ 0.23
SCARNA21-201ENST00000517026 NFRKBQ6P4R8 1299 aa16.49■□□□□ 0.23
SCARNA21-201ENST00000517026 ABHD15Q6UXT9 468 aa16.49■□□□□ 0.23
SCARNA21-201ENST00000517026 C7orf31Q8N865 590 aa16.49■□□□□ 0.23
SCARNA21-201ENST00000517026 SPRYD3Q8NCJ5 442 aa16.49■□□□□ 0.23
SCARNA21-201ENST00000517026 SLC17A8Q8NDX2 589 aa16.49■□□□□ 0.23
SCARNA21-201ENST00000517026 GLG1Q92896 1179 aa16.49■□□□□ 0.23
SCARNA21-201ENST00000517026 KATNAL1Q9BW62 490 aa16.49■□□□□ 0.23
SCARNA21-201ENST00000517026 TEKT3Q9BXF9 490 aa16.49■□□□□ 0.23
SCARNA21-201ENST00000517026 UNC45AQ9H3U1 944 aa16.49■□□□□ 0.23
SCARNA21-201ENST00000517026 RNPEPQ9H4A4 650 aa16.49■□□□□ 0.23
SCARNA21-201ENST00000517026 KCNMB3Q9NPA1 279 aa16.49■□□□□ 0.23
SCARNA21-201ENST00000517026 TMEM39AQ9NV64 488 aa16.49■□□□□ 0.23
SCARNA21-201ENST00000517026 MROH7Q68CQ1 1323 aa16.48■□□□□ 0.23
SCARNA21-201ENST00000517026 SUPT20HL2P0C7V6 817 aa16.48■□□□□ 0.23
SCARNA21-201ENST00000517026 MCM7P33993 719 aa16.48■□□□□ 0.23
SCARNA21-201ENST00000517026 ZNF200P98182 395 aaPredicted RBP16.48■□□□□ 0.23
SCARNA21-201ENST00000517026 KRT76Q01546 638 aa16.48■□□□□ 0.23
SCARNA21-201ENST00000517026 GDF6Q6KF10 455 aaPredicted RBP16.48■□□□□ 0.23
SCARNA21-201ENST00000517026 ZNF746Q6NUN9 644 aaPredicted RBP16.48■□□□□ 0.23
SCARNA21-201ENST00000517026 LRCH3Q96II8 777 aa16.48■□□□□ 0.23
SCARNA21-201ENST00000517026 SEZ6LQ9BYH1 1024 aa16.48■□□□□ 0.23
SCARNA21-201ENST00000517026 TMEM60Q9H2L4 133 aa16.48■□□□□ 0.23
SCARNA21-201ENST00000517026 IGKV6D-21A0A0A0MT36 114 aa16.47■□□□□ 0.23
SCARNA21-201ENST00000517026 VPS37CA5D8V6 355 aaPredicted RBP16.47■□□□□ 0.23
SCARNA21-201ENST00000517026 BACH1O14867 736 aa16.47■□□□□ 0.23
SCARNA21-201ENST00000517026 TLR3O15455 904 aaKnown RBP16.47■□□□□ 0.23
SCARNA21-201ENST00000517026 MARCH6O60337 910 aa16.47■□□□□ 0.23
SCARNA21-201ENST00000517026 SMIM10L2AP0DMW4 78 aa16.47■□□□□ 0.23
SCARNA21-201ENST00000517026 SMIM10L2BP0DMW5 78 aa16.47■□□□□ 0.23
SCARNA21-201ENST00000517026 CYP2C9P11712 490 aa16.47■□□□□ 0.23
SCARNA21-201ENST00000517026 SYT1P21579 422 aa16.47■□□□□ 0.23
SCARNA21-201ENST00000517026 ITGB8P26012 769 aa16.47■□□□□ 0.23
SCARNA21-201ENST00000517026 TOB1P50616 345 aaPredicted RBP16.47■□□□□ 0.23
SCARNA21-201ENST00000517026 STAT5BP51692 787 aa16.47■□□□□ 0.23
SCARNA21-201ENST00000517026 PTPN11Q06124 597 aaPredicted RBP16.47■□□□□ 0.23
SCARNA21-201ENST00000517026 TTC38Q5R3I4 469 aa16.47■□□□□ 0.23
SCARNA21-201ENST00000517026 SWSAP1Q6NVH7 229 aa16.47■□□□□ 0.23
SCARNA21-201ENST00000517026 MIS18BP1Q6P0N0 1132 aa16.47■□□□□ 0.23
SCARNA21-201ENST00000517026 B3GNT9Q6UX72 402 aa16.47■□□□□ 0.23
SCARNA21-201ENST00000517026 SESTD1Q86VW0 696 aa16.47■□□□□ 0.23
SCARNA21-201ENST00000517026 CCDC60Q8IWA6 550 aaPredicted RBP16.47■□□□□ 0.23
SCARNA21-201ENST00000517026 FAM20AQ96MK3 541 aa16.47■□□□□ 0.23
SCARNA21-201ENST00000517026 CTAGE1Q96RT6 745 aa16.47■□□□□ 0.23
SCARNA21-201ENST00000517026 GDF15Q99988 308 aa16.47■□□□□ 0.23
SCARNA21-201ENST00000517026 SMARCAD1Q9H4L7 1026 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms