RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 NOL9Q5SY16 702 aaKnown RBP2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 C12orf60Q5U649 245 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 VPS53Q5VIR6 699 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 FBXW10Q5XX13 1052 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 TATDN1Q6P1N9 297 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 CWC27Q6UX04 472 aaKnown RBP2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 LINC00114Q6XXX2 140 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 KIAA1211Q6ZU35 1233 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 C16orf86Q6ZW13 317 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 KRT26Q7Z3Y9 468 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 SKAP1Q86WV1 359 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 FBXO11Q86XK2 927 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 FOXP4Q8IVH2 680 aaPredicted RBP2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 MAPKAPK5Q8IW41 473 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 AMOTL1Q8IY63 956 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 IFNL3Q8IZI9 196 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 FBXL16Q8N461 479 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 C12orf50Q8NA57 414 aaPredicted RBP2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 MIGA1Q8NAN2 632 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 GALNT11Q8NCW6 608 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 PHC3Q8NDX5 983 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 STK35Q8TDR2 534 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 SH3RF3Q8TEJ3 882 aaPredicted RBP2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 TGFBRAP1Q8WUH2 860 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 SDR42E1Q8WUS8 393 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 ZNF296Q8WUU4 475 aaPredicted RBP2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 CPLX3Q8WVH0 158 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 STAG1Q8WVM7 1258 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 MAP4K1Q92918 833 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 ELMO3Q96BJ8 720 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 DCPSQ96C86 337 aaKnown RBP2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 SCARF2Q96GP6 870 aaPredicted RBP2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 HHIPL1Q96JK4 782 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 CCDC17Q96LX7 622 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 TEPSINQ96N21 525 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 SEC62Q99442 399 aaKnown RBP2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 TGIF2Q9GZN2 237 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 NAPBQ9H115 298 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 DEFB129Q9H1M3 183 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 RNF41Q9H4P4 317 aaPredicted RBP2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 DNAJC18Q9H819 358 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 ARMT1Q9H993 441 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 VEZTQ9HBM0 779 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 SSU72Q9NP77 194 aaKnown RBP2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 PRDM6Q9NQX0 595 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 NOP53Q9NZM5 478 aaKnown RBP2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 PI4KBQ9UBF8 816 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 ZNF112Q9UJU3 913 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 DDX41Q9UJV9 622 aaKnown RBP2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 SYNPO2Q9UMS6 1093 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 PCDHA4Q9UN74 947 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 PCDHB5Q9Y5E4 795 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 PCDHAC2Q9Y5I4 1007 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 CSADQ9Y600 493 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 SLC4A4Q9Y6R1 1079 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 AK9Q5TCS8 1911 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 MYH2Q9UKX2 1941 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 WDR19Q8NEZ3 1342 aa2.59□□□□□ -2
SCARNA16.3-201ENST00000516595 LAMA4Q16363 1823 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 MYO5AQ9Y4I1 1855 aaKnown RBP2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 IGKV6D-41A0A0C4DH26 115 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 DDTLA6NHG4 134 aaPredicted RBP2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 TCP10L2B9ZVM9 353 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 ADM5C9JUS6 153 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 ZNF213O14771 459 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 WIPF1O43516 503 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 PRKAB2O43741 272 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 RNGTTO60942 597 aaKnown RBP2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 DEAF1O75398 565 aaPredicted RBP2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 ARHGEF15O94989 841 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 ECEL1O95672 775 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 SLC3A2P08195 630 aaKnown RBP2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 ASNSP08243 561 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 HMGB1P09429 215 aaKnown RBP2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 ZKSCAN1P17029 563 aaPredicted RBP2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 TFE3P19532 575 aaPredicted RBP2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 MCCP23508 829 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 HSPA4P34932 840 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 IREB2P48200 963 aaKnown RBP2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 PLCD1P51178 756 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 USP11P51784 963 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 RCAN1P53805 252 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 CACNB3P54284 484 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 LMNB2Q03252 620 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 PDE4BQ07343 736 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 APOBRQ0VD83 1088 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 PAK2Q13177 524 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 PICALMQ13492 652 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 SEPT6Q14141 434 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 IMMTQ16891 758 aaKnown RBP2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 CCDC178Q5BJE1 867 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 HP1BP3Q5SSJ5 553 aaPredicted RBP2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 AKNAD1Q5T1N1 836 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 CREB3L3Q68CJ9 461 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 FBXL19Q6PCT2 694 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 CTR9Q6PD62 1173 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 IGF2-ASQ6U949 168 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 AGMOQ6ZNB7 445 aa2.58□□□□□ -2
SCARNA16.3-201ENST00000516595 CCDC129Q6ZRS4 1044 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms