RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 BAG4O95429 457 aaKnown RBP0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 PRG2P13727 222 aa0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 MAN2A2P49641 1150 aa0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 NANOS2P60321 138 aaKnown RBP0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 RHDQ02161 417 aa0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 ERV3-1Q14264 604 aa0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 ZNF568Q3ZCX4 644 aa0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 FKBP15Q5T1M5 1219 aa0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 NBPF12Q5TAG4 269 aaPredicted RBP0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 ZNF662Q6ZS27 426 aa0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 SH2D6Q7Z4S9 175 aa0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 REXO1L1PQ8IX06 675 aa0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 DCP1BQ8IZD4 617 aaKnown RBP0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 CAGE1Q8TC20 777 aa0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 DNASE2BQ8WZ79 361 aa0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 RPL36ALQ969Q0 106 aaKnown RBP0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 PTCHD1Q96NR3 888 aa0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 NGRNQ9NPE2 291 aaKnown RBP0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 ANLNQ9NQW6 1124 aa0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 CBLCQ9ULV8 474 aa0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 BTBD3Q9Y2F9 522 aa0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 DIS3Q9Y2L1 958 aaKnown RBP0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 NR2E1Q9Y466 385 aa0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 KLRG2A4D1S0 409 aaPredicted RBP0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 IFITM10A6NMD0 228 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 TNFRSF10CO14798 259 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 WNT9AO14904 365 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 PROP1O75360 226 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 UBOX5O94941 541 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 IGKV3-20P01619 116 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 CKMP06732 381 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 YARSP54577 528 aaKnown RBP0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 TUBA4AP68366 448 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 E2F1Q01094 437 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 PDE4BQ07343 736 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 DDR1Q08345 913 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 MTMR3Q13615 1198 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 AAMPQ13685 434 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 NFYCQ13952 458 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 SMAD2Q15796 467 aaKnown RBP0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 TIGD2Q4W5G0 525 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 PLEKHG4Q58EX7 1191 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 ALKBH2Q6NS38 261 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 TEPPQ6URK8 271 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 TMC5Q6UXY8 1006 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 BNC2Q6ZN30 1099 aaPredicted RBP0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 MILR1Q7Z6M3 343 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 ZNF329Q86UD4 541 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 CMTR2Q8IYT2 770 aaKnown RBP0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 FNBP4Q8N3X1 1017 aaPredicted RBP0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 LILRA3Q8N6C8 439 aaPredicted RBP0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 SEMA6DQ8NFY4 1073 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 COQ10AQ96MF6 247 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 WRNIP1Q96S55 665 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 TMEM209Q96SK2 561 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 KIF2CQ99661 725 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 HIRIP3Q9BW71 556 aaPredicted RBP0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 CARD11Q9BXL7 1154 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 SRRTQ9BXP5 876 aaKnown RBP0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 GFOD1Q9NXC2 390 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 ANKFY1Q9P2R3 1169 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 GULP1Q9UBP9 304 aa0.39□□□□□ -2.35
RNU6-542P-201ENST00000516405 GRID2O43424 1007 aa0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 DNAJA2O60884 412 aa0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 LRG1P02750 347 aa0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 PLCG1P19174 1290 aa0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 ITPKBP27987 946 aa0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 RABGGTBP53611 331 aa0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 RRADP55042 308 aa0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 SEPT6Q14141 434 aa0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 TMEM201Q5SNT2 666 aa0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 C9orf50Q5SZB4 431 aa0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 KIAA1614Q5VZ46 1190 aa0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 PROSER1Q86XN7 944 aa0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 LCORLQ8N3X6 602 aa0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 TAB3Q8N5C8 712 aaPredicted RBP0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 VGLL2Q8N8G2 317 aa0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 IL27Q8NEV9 243 aa0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 PLEKHO2Q8TD55 490 aa0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 CAVIN3Q969G5 261 aa0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 RHOVQ96L33 236 aa0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 DUSP26Q9BV47 211 aa0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 BCO2Q9BYV7 579 aa0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 NELFAQ9H3P2 528 aa0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 KIAA1586Q9HCI6 787 aa0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 PUF60Q9UHX1 559 aaKnown RBP0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 TBC1D30Q9Y2I9 924 aa0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 PCDHAC2Q9Y5I4 1007 aa0.38□□□□□ -2.35
RNU6-542P-201ENST00000516405 FBN3Q75N90 2809 aa0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 EME2A4GXA9 379 aaPredicted RBP0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 FAM221BA6H8Z2 402 aa0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 ARHGAP6O43182 974 aa0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 TBC1D8O95759 1140 aa0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 PRR35P0CG20 571 aa0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 NPR3P17342 541 aa0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 LMNB1P20700 586 aa0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 MPLP40238 635 aa0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 NR4A2P43354 598 aa0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 AVPR1BP47901 424 aa0.37□□□□□ -2.35
RNU6-542P-201ENST00000516405 PTTG1IPP53801 180 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms