RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	NIPA1	Q7RTP0	329 aa		5.02	□□□□□ -1.61
ATP2C1-223	ENST00000515854	APTX	Q7Z2E3	356 aa	Known RBP	5.02	□□□□□ -1.61
ATP2C1-223	ENST00000515854	SULF1	Q8IWU6	871 aa		5.02	□□□□□ -1.61
ATP2C1-223	ENST00000515854	TRMT44	Q8IYL2	757 aa	Known RBP	5.02	□□□□□ -1.61
ATP2C1-223	ENST00000515854	ERMN	Q8TAM6	284 aa		5.02	□□□□□ -1.61
ATP2C1-223	ENST00000515854	CYP2W1	Q8TAV3	490 aa		5.02	□□□□□ -1.61
ATP2C1-223	ENST00000515854	RBM46	Q8TBY0	533 aa	Known RBP	5.02	□□□□□ -1.61
ATP2C1-223	ENST00000515854	SYTL5	Q8TDW5	730 aa	Predicted RBP	5.02	□□□□□ -1.61
ATP2C1-223	ENST00000515854	NELFB	Q8WX92	580 aa		5.02	□□□□□ -1.61
ATP2C1-223	ENST00000515854	SLC5A5	Q92911	643 aa		5.02	□□□□□ -1.61
ATP2C1-223	ENST00000515854	CCDC47	Q96A33	483 aa	Known RBP	5.02	□□□□□ -1.61
ATP2C1-223	ENST00000515854	ATG4C	Q96DT6	458 aa		5.02	□□□□□ -1.61
ATP2C1-223	ENST00000515854	DHTKD1	Q96HY7	919 aa	Predicted RBP	5.02	□□□□□ -1.61
ATP2C1-223	ENST00000515854	ZNF830	Q96NB3	372 aa	Predicted RBP	5.02	□□□□□ -1.61
ATP2C1-223	ENST00000515854	NAP1L5	Q96NT1	182 aa	Predicted RBP	5.02	□□□□□ -1.61
ATP2C1-223	ENST00000515854	TRERF1	Q96PN7	1200 aa		5.02	□□□□□ -1.61
ATP2C1-223	ENST00000515854	MXRA8	Q9BRK3	442 aa		5.02	□□□□□ -1.61
ATP2C1-223	ENST00000515854	POLR3C	Q9BUI4	534 aa	Predicted RBP	5.02	□□□□□ -1.61
ATP2C1-223	ENST00000515854	SAMSN1	Q9NSI8	373 aa	Known RBP	5.02	□□□□□ -1.61
ATP2C1-223	ENST00000515854	TMOD4	Q9NZQ9	345 aa		5.02	□□□□□ -1.61
ATP2C1-223	ENST00000515854	COL20A1	Q9P218	1284 aa		5.02	□□□□□ -1.61
ATP2C1-223	ENST00000515854	GDA	Q9Y2T3	454 aa		5.02	□□□□□ -1.61
ATP2C1-223	ENST00000515854		A0A1B0GTH6	734 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	GLTPD2	A6NH11	291 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854		E9PMD0	336 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	EML1	O00423	815 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	CXCL11	O14625	94 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	PPP1R12B	O60237	982 aa	Predicted RBP	5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	GRIN3B	O60391	1043 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	PLA2G4B	P0C869	781 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	AR	P10275	920 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	ITGB5	P18084	799 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	CDK11B	P21127	795 aa	Known RBP	5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	MUT	P22033	750 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	CCNE1	P24864	410 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	EPHX2	P34913	555 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	IREB2	P48200	963 aa	Known RBP	5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	STX17	P56962	302 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	GSDMD	P57764	484 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	RPS6	P62753	249 aa	Known RBP	5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	UBXN2A	P68543	259 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	ASIC1	P78348	528 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	SET	Q01105	290 aa	Predicted RBP	5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	PPAT	Q06203	517 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	SPAG1	Q07617	926 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	STK4	Q13043	487 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	PSMD2	Q13200	908 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	PPP2R5C	Q13362	524 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	STIM1	Q13586	685 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	PRKG1	Q13976	671 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	DHX8	Q14562	1220 aa	Known RBP	5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	NR1I3	Q14994	352 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	TMEM132B	Q14DG7	1078 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	NCAPH2	Q6IBW4	605 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	KLHL10	Q6JEL2	608 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	XRRA1	Q6P2D8	792 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	RNF207	Q6ZRF8	634 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	ILDR2	Q71H61	639 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	KRT26	Q7Z3Y9	468 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	CATSPER3	Q86XQ3	398 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	VSTM4	Q8IW00	320 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	LRRC8A	Q8IWT6	810 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	ANKRD13A	Q8IZ07	590 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	CPXCR1	Q8N123	301 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	SYT2	Q8N9I0	419 aa	Predicted RBP	5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	KIAA1524	Q8TCG1	905 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	CACTIN	Q8WUQ7	758 aa	Known RBP	5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	DDX12P	Q92771	950 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	DNAJC19	Q96DA6	116 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	CDCA5	Q96FF9	252 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	WNK4	Q96J92	1243 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	TAAR1	Q96RJ0	339 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	RIT2	Q99578	217 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	HSD17B14	Q9BPX1	270 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	EIF2AK1	Q9BQI3	630 aa	Known RBP	5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	WDR11	Q9BZH6	1224 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	TAF1D	Q9H5J8	278 aa	Predicted RBP	5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	JADE2	Q9NQC1	790 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	RNF146	Q9NTX7	359 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	EXOC1	Q9NV70	894 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	INTS13	Q9NVM9	706 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	HOXC10	Q9NYD6	342 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	LIMA1	Q9UHB6	759 aa	Known RBP	5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	ZNF214	Q9UL59	606 aa	Predicted RBP	5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	KIAA1024	Q9UPX6	916 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	CTNND2	Q9UQB3	1225 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	RIPK3	Q9Y572	518 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	CTDP1	Q9Y5B0	961 aa	Predicted RBP	5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	UBIAD1	Q9Y5Z9	338 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	CSAD	Q9Y600	493 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	PHIP	Q8WWQ0	1821 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	MYH7B	A7E2Y1	1941 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854	PAPPA2	Q9BXP8	1791 aa		5.01	□□□□□ -1.61
ATP2C1-223	ENST00000515854		A0A0G2JLL6	359 aa	Predicted RBP	5	□□□□□ -1.61
ATP2C1-223	ENST00000515854	FRMD3	A2A2Y4	597 aa		5	□□□□□ -1.61
ATP2C1-223	ENST00000515854	IQCA1L	A6NCM1	817 aa		5	□□□□□ -1.61
ATP2C1-223	ENST00000515854	SPDYE5	A6NIY4	337 aa		5	□□□□□ -1.61
ATP2C1-223	ENST00000515854	IPO5	O00410	1097 aa	Known RBP	5	□□□□□ -1.61
ATP2C1-223	ENST00000515854	PSMA7	O14818	248 aa		5	□□□□□ -1.61
ATP2C1-223	ENST00000515854	DHX15	O43143	795 aa	Known RBP	5	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms