RNA–Protein interactions for RNA: ENST00000515835.2

PDE4D-225, Transcript of phosphodiesterase 4D, humanhuman

TSL 4 BASIC

Gene PDE4D, Length 590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-225ENST00000515835 RSPO2Q6UXX9 243 aaPredicted RBP8.49□□□□□ -1.05
PDE4D-225ENST00000515835 NOP9Q86U38 636 aaKnown RBP8.49□□□□□ -1.05
PDE4D-225ENST00000515835 CCDC103Q8IW40 242 aa8.49□□□□□ -1.05
PDE4D-225ENST00000515835 INTS4Q96HW7 963 aaKnown RBP8.49□□□□□ -1.05
PDE4D-225ENST00000515835 DHRS4Q9BTZ2 278 aa8.49□□□□□ -1.05
PDE4D-225ENST00000515835 BRD4O60885 1362 aaPredicted RBP8.48□□□□□ -1.05
PDE4D-225ENST00000515835 CCDC163A0A0D9SF12 145 aa8.48□□□□□ -1.05
PDE4D-225ENST00000515835 FAM83GA6ND36 823 aa8.48□□□□□ -1.05
PDE4D-225ENST00000515835 IGSF3O75054 1194 aa8.48□□□□□ -1.05
PDE4D-225ENST00000515835 KIR3DS1Q14943 382 aa8.48□□□□□ -1.05
PDE4D-225ENST00000515835 FAM209AQ5JX71 171 aa8.48□□□□□ -1.05
PDE4D-225ENST00000515835 USP53Q70EK8 1073 aa8.48□□□□□ -1.05
PDE4D-225ENST00000515835 IRF2BP1Q8IU81 584 aa8.48□□□□□ -1.05
PDE4D-225ENST00000515835 SIRT2Q8IXJ6 389 aa8.48□□□□□ -1.05
PDE4D-225ENST00000515835 DCAF4Q8WV16 495 aa8.48□□□□□ -1.05
PDE4D-225ENST00000515835 EXOC2Q96KP1 924 aa8.48□□□□□ -1.05
PDE4D-225ENST00000515835 CDK19Q9BWU1 502 aa8.48□□□□□ -1.05
PDE4D-225ENST00000515835 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.48□□□□□ -1.05
PDE4D-225ENST00000515835 MARF1Q9Y4F3 1742 aaKnown RBP8.48□□□□□ -1.05
PDE4D-225ENST00000515835 MYO1BO43795 1136 aa8.47□□□□□ -1.05
PDE4D-225ENST00000515835 MSL3P1P0C860 447 aa8.47□□□□□ -1.05
PDE4D-225ENST00000515835 GALK1P51570 392 aa8.47□□□□□ -1.05
PDE4D-225ENST00000515835 GTF2A2P52657 109 aa8.47□□□□□ -1.05
PDE4D-225ENST00000515835 ERVFRD-1P60508 538 aa8.47□□□□□ -1.05
PDE4D-225ENST00000515835 NTRK3Q16288 839 aa8.47□□□□□ -1.05
PDE4D-225ENST00000515835 MPZL3Q6UWV2 235 aa8.47□□□□□ -1.05
PDE4D-225ENST00000515835 RCBTB1Q8NDN9 531 aa8.47□□□□□ -1.05
PDE4D-225ENST00000515835 KISS1RQ969F8 398 aaPredicted RBP8.47□□□□□ -1.05
PDE4D-225ENST00000515835 LIN37Q96GY3 246 aaPredicted RBP8.47□□□□□ -1.05
PDE4D-225ENST00000515835 GPR27Q9NS67 375 aa8.47□□□□□ -1.05
PDE4D-225ENST00000515835 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.47□□□□□ -1.05
PDE4D-225ENST00000515835 TIMM13Q9Y5L4 95 aaPredicted RBP8.47□□□□□ -1.05
PDE4D-225ENST00000515835 PTCH2Q9Y6C5 1203 aa8.47□□□□□ -1.05
PDE4D-225ENST00000515835 CENPJQ9HC77 1338 aaPredicted RBP8.47□□□□□ -1.05
PDE4D-225ENST00000515835 TRPM3Q9HCF6 1732 aaPredicted RBP8.46□□□□□ -1.05
PDE4D-225ENST00000515835 NWD2Q9ULI1 1742 aa8.46□□□□□ -1.05
PDE4D-225ENST00000515835 A0A1W2PQJ5 194 aa8.46□□□□□ -1.06
PDE4D-225ENST00000515835 RPL11P62913 178 aaKnown RBP8.46□□□□□ -1.06
PDE4D-225ENST00000515835 NBPF8Q3BBV2 869 aa8.46□□□□□ -1.06
PDE4D-225ENST00000515835 LZTR1Q8N653 840 aa8.46□□□□□ -1.06
PDE4D-225ENST00000515835 SH3TC2Q8TF17 1288 aa8.46□□□□□ -1.06
PDE4D-225ENST00000515835 DPF3Q92784 378 aa8.46□□□□□ -1.06
PDE4D-225ENST00000515835 ZFYVE21Q9BQ24 234 aa8.46□□□□□ -1.06
PDE4D-225ENST00000515835 MTA3Q9BTC8 594 aa8.46□□□□□ -1.06
PDE4D-225ENST00000515835 TNFRSF12AQ9NP84 129 aa8.46□□□□□ -1.06
PDE4D-225ENST00000515835 GULP1Q9UBP9 304 aa8.46□□□□□ -1.06
PDE4D-225ENST00000515835 MRPS23Q9Y3D9 190 aaKnown RBP8.46□□□□□ -1.06
PDE4D-225ENST00000515835 GLI3P10071 1580 aa8.46□□□□□ -1.06
PDE4D-225ENST00000515835 ACEP12821 1306 aa8.46□□□□□ -1.06
PDE4D-225ENST00000515835 ALS2Q96Q42 1657 aa8.46□□□□□ -1.06
PDE4D-225ENST00000515835 ARHGEF28Q8N1W1 1705 aaKnown RBP8.46□□□□□ -1.06
PDE4D-225ENST00000515835 BLMP54132 1417 aaPredicted RBP8.46□□□□□ -1.06
PDE4D-225ENST00000515835 PPP1R11O60927 126 aaPredicted RBP8.45□□□□□ -1.06
PDE4D-225ENST00000515835 STYK1Q6J9G0 422 aa8.45□□□□□ -1.06
PDE4D-225ENST00000515835 RNPC3Q96LT9 517 aaKnown RBP8.45□□□□□ -1.06
PDE4D-225ENST00000515835 PHF20Q9BVI0 1012 aa8.45□□□□□ -1.06
PDE4D-225ENST00000515835 BTG4Q9NY30 223 aa8.45□□□□□ -1.06
PDE4D-225ENST00000515835 RGPD8O14715 1765 aaPredicted RBP8.44□□□□□ -1.06
PDE4D-225ENST00000515835 OR14I1A6ND48 311 aa8.44□□□□□ -1.06
PDE4D-225ENST00000515835 SRGAP3O43295 1099 aa8.44□□□□□ -1.06
PDE4D-225ENST00000515835 LCP1P13796 627 aa8.44□□□□□ -1.06
PDE4D-225ENST00000515835 PDE6BP35913 854 aa8.44□□□□□ -1.06
PDE4D-225ENST00000515835 ADGRF1Q5T601 910 aa8.44□□□□□ -1.06
PDE4D-225ENST00000515835 PRDM11Q9NQV5 511 aa8.44□□□□□ -1.06
PDE4D-225ENST00000515835 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.44□□□□□ -1.06
PDE4D-225ENST00000515835 RWDD3Q9Y3V2 267 aa8.44□□□□□ -1.06
PDE4D-225ENST00000515835 SPATA31A5Q5VU36 1347 aa8.44□□□□□ -1.06
PDE4D-225ENST00000515835 SPATA31A7Q8IWB4 1347 aa8.44□□□□□ -1.06
PDE4D-225ENST00000515835 ITSN1Q15811 1721 aa8.43□□□□□ -1.06
PDE4D-225ENST00000515835 ABCA3Q99758 1704 aa8.43□□□□□ -1.06
PDE4D-225ENST00000515835 EP400Q96L91 3159 aa8.43□□□□□ -1.06
PDE4D-225ENST00000515835 COL14A1Q05707 1796 aaKnown RBP8.43□□□□□ -1.06
PDE4D-225ENST00000515835 BLACEA4D250 179 aa8.43□□□□□ -1.06
PDE4D-225ENST00000515835 MPOP05164 745 aa8.43□□□□□ -1.06
PDE4D-225ENST00000515835 C6orf222P0C671 652 aaPredicted RBP8.43□□□□□ -1.06
PDE4D-225ENST00000515835 TACR1P25103 407 aa8.43□□□□□ -1.06
PDE4D-225ENST00000515835 GABREP78334 506 aa8.43□□□□□ -1.06
PDE4D-225ENST00000515835 LSAMPQ13449 338 aa8.43□□□□□ -1.06
PDE4D-225ENST00000515835 SQSTM1Q13501 440 aa8.43□□□□□ -1.06
PDE4D-225ENST00000515835 BICRALQ6AI39 1079 aa8.43□□□□□ -1.06
PDE4D-225ENST00000515835 MAMDC2Q7Z304 686 aaPredicted RBP8.43□□□□□ -1.06
PDE4D-225ENST00000515835 KRT27Q7Z3Y8 459 aa8.43□□□□□ -1.06
PDE4D-225ENST00000515835 CABP7Q86V35 215 aa8.43□□□□□ -1.06
PDE4D-225ENST00000515835 Q8N1Y9 231 aa8.43□□□□□ -1.06
PDE4D-225ENST00000515835 PTPRN2Q92932 1015 aa8.43□□□□□ -1.06
PDE4D-225ENST00000515835 TMEM260Q9NX78 707 aa8.43□□□□□ -1.06
PDE4D-225ENST00000515835 PCDHA2Q9Y5H9 948 aa8.43□□□□□ -1.06
PDE4D-225ENST00000515835 USP19O94966 1318 aa8.43□□□□□ -1.06
PDE4D-225ENST00000515835 EVC2Q86UK5 1308 aa8.43□□□□□ -1.06
PDE4D-225ENST00000515835 CPDO75976 1380 aa8.43□□□□□ -1.06
PDE4D-225ENST00000515835 KIAA0232Q92628 1395 aa8.43□□□□□ -1.06
PDE4D-225ENST00000515835 PPIP5K1Q6PFW1 1433 aa8.43□□□□□ -1.06
PDE4D-225ENST00000515835 LRRC10BA6NIK2 292 aa8.42□□□□□ -1.06
PDE4D-225ENST00000515835 HRKO00198 91 aa8.42□□□□□ -1.06
PDE4D-225ENST00000515835 PAX4O43316 350 aa8.42□□□□□ -1.06
PDE4D-225ENST00000515835 FUCA1P04066 466 aa8.42□□□□□ -1.06
PDE4D-225ENST00000515835 BCL6P41182 706 aa8.42□□□□□ -1.06
PDE4D-225ENST00000515835 GPR85P60893 370 aa8.42□□□□□ -1.06
PDE4D-225ENST00000515835 NR1I3Q14994 352 aa8.42□□□□□ -1.06
PDE4D-225ENST00000515835 KCNT2Q6UVM3 1135 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms