RNA–Protein interactions for RNA: ENST00000515798.5

BRIX1-205, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 2

Gene BRIX1, Length 2,196 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-205ENST00000515798 CROCCP2Q86T23 111 aa11.69□□□□□ -0.54
BRIX1-205ENST00000515798 TBC1D16Q8TBP0 767 aa11.69□□□□□ -0.54
BRIX1-205ENST00000515798 UBLCP1Q8WVY7 318 aaPredicted RBP11.69□□□□□ -0.54
BRIX1-205ENST00000515798 MAML3Q96JK9 1138 aa11.69□□□□□ -0.54
BRIX1-205ENST00000515798 DHRS1Q96LJ7 313 aa11.69□□□□□ -0.54
BRIX1-205ENST00000515798 NUDCD1Q96RS6 583 aa11.69□□□□□ -0.54
BRIX1-205ENST00000515798 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.69□□□□□ -0.546e-9■□□□□ 9.7
BRIX1-205ENST00000515798 ADAM7Q9H2U9 754 aa11.69□□□□□ -0.54
BRIX1-205ENST00000515798 INTS9Q9NV88 658 aaKnown RBP11.69□□□□□ -0.54
BRIX1-205ENST00000515798 TUBA8Q9NY65 449 aaPredicted RBP11.69□□□□□ -0.54
BRIX1-205ENST00000515798 WDR46O15213 610 aaKnown RBP11.69□□□□□ -0.54
BRIX1-205ENST00000515798 HNRNPRO43390 633 aaKnown RBP11.69□□□□□ -0.54
BRIX1-205ENST00000515798 TROVE2P10155 538 aaKnown RBP eCLIP11.69□□□□□ -0.54
BRIX1-205ENST00000515798 EEF1GP26641 437 aaKnown RBP11.69□□□□□ -0.54
BRIX1-205ENST00000515798 HNRNPH3P31942 346 aaKnown RBP11.69□□□□□ -0.54
BRIX1-205ENST00000515798 DNM2P50570 870 aa11.69□□□□□ -0.54
BRIX1-205ENST00000515798 HPCAP84074 193 aa11.69□□□□□ -0.54
BRIX1-205ENST00000515798 ADCY1Q08828 1119 aa11.69□□□□□ -0.54
BRIX1-205ENST00000515798 TEFQ10587 303 aa11.69□□□□□ -0.54
BRIX1-205ENST00000515798 PAK1Q13153 545 aa11.69□□□□□ -0.54
BRIX1-205ENST00000515798 TAF7Q15545 349 aaPredicted RBP11.69□□□□□ -0.54
BRIX1-205ENST00000515798 SLC15A3Q8IY34 581 aa11.69□□□□□ -0.54
BRIX1-205ENST00000515798 INPP5DQ92835 1189 aa11.69□□□□□ -0.54
BRIX1-205ENST00000515798 PAGE5Q96GU1 130 aa11.69□□□□□ -0.54
BRIX1-205ENST00000515798 DHTKD1Q96HY7 919 aaPredicted RBP11.69□□□□□ -0.54
BRIX1-205ENST00000515798 IFIH1Q9BYX4 1025 aaKnown RBP11.69□□□□□ -0.54
BRIX1-205ENST00000515798 DCLRE1BQ9H816 532 aa11.69□□□□□ -0.54
BRIX1-205ENST00000515798 TBCCD1Q9NVR7 557 aa11.69□□□□□ -0.54
BRIX1-205ENST00000515798 NMRK1Q9NWW6 199 aa11.69□□□□□ -0.54
BRIX1-205ENST00000515798 PALLDQ8WX93 1383 aa11.69□□□□□ -0.54
BRIX1-205ENST00000515798 A0A0J9YVX5 310 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 WNT7AO00755 349 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 ATP9BO43861 1147 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 ATP9AO75110 1047 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 SRGNP10124 158 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 MLH1P40692 756 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 GPSM2P81274 684 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 CYP27A1Q02318 531 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 TMEM259Q4ZIN3 620 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 RNF43Q68DV7 783 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 NME9Q86XW9 330 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 CCNJLQ8IV13 435 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 ARL10Q8N8L6 244 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 FERMT2Q96AC1 680 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 MS4A14Q96JA4 679 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 CLMNQ96JQ2 1002 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 CCDC42Q96M95 316 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 INPP4AQ96PE3 977 aaPredicted RBP11.68□□□□□ -0.54
BRIX1-205ENST00000515798 PHAXQ9H814 394 aaKnown RBP11.68□□□□□ -0.54
BRIX1-205ENST00000515798 DDX21Q9NR30 783 aaKnown RBP eCLIP11.68□□□□□ -0.54
BRIX1-205ENST00000515798 PRKAG3Q9UGI9 489 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 PNMA2Q9UL42 364 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 USP20Q9Y2K6 914 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 STK24Q9Y6E0 443 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 PIK3C2AO00443 1686 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 SHBGP04278 402 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 HOXD12P35452 270 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 TRADDQ15628 312 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 LIN52Q52LA3 116 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 TMC3Q7Z5M5 1100 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 MYOCDQ8IZQ8 938 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 SAMD3Q8N6K7 520 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 NOX5Q96PH1 765 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 NACA2Q9H009 215 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 DPH5Q9H2P9 285 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 INTUQ9ULD6 942 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 SYNPO2Q9UMS6 1093 aa11.68□□□□□ -0.54
BRIX1-205ENST00000515798 NCK2O43639 380 aa11.67□□□□□ -0.54
BRIX1-205ENST00000515798 CYP1A1P04798 512 aaPredicted RBP11.67□□□□□ -0.54
BRIX1-205ENST00000515798 HNRNPCP07910 306 aaKnown RBP eCLIP11.67□□□□□ -0.54
BRIX1-205ENST00000515798 NUDT17P0C025 328 aa11.67□□□□□ -0.54
BRIX1-205ENST00000515798 HDAC4P56524 1084 aa11.67□□□□□ -0.54
BRIX1-205ENST00000515798 FBLN2P98095 1184 aa11.67□□□□□ -0.54
BRIX1-205ENST00000515798 GSTM4Q03013 218 aa11.67□□□□□ -0.54
BRIX1-205ENST00000515798 GRIN1Q05586 938 aa11.67□□□□□ -0.54
BRIX1-205ENST00000515798 CTDSPL2Q05D32 466 aa11.67□□□□□ -0.54
BRIX1-205ENST00000515798 FAM13CQ8NE31 585 aa11.67□□□□□ -0.54
BRIX1-205ENST00000515798 DDX43Q9NXZ2 648 aaKnown RBP11.67□□□□□ -0.54
BRIX1-205ENST00000515798 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.67□□□□□ -0.54
BRIX1-205ENST00000515798 CPDO75976 1380 aa11.67□□□□□ -0.54
BRIX1-205ENST00000515798 TMEM247A6NEH6 219 aa11.67□□□□□ -0.54
BRIX1-205ENST00000515798 LGR5O75473 907 aa11.67□□□□□ -0.54
BRIX1-205ENST00000515798 RASA1P20936 1047 aa11.67□□□□□ -0.54
BRIX1-205ENST00000515798 ACVR2BQ13705 512 aa11.67□□□□□ -0.54
BRIX1-205ENST00000515798 TRIM29Q14134 588 aa11.67□□□□□ -0.54
BRIX1-205ENST00000515798 MTHFSDQ2M296 383 aaKnown RBP11.67□□□□□ -0.54
BRIX1-205ENST00000515798 SLC44A4Q53GD3 710 aa11.67□□□□□ -0.54
BRIX1-205ENST00000515798 RILPL1Q5EBL4 403 aa11.67□□□□□ -0.54
BRIX1-205ENST00000515798 COL23A1Q86Y22 540 aaPredicted RBP11.67□□□□□ -0.54
BRIX1-205ENST00000515798 OGFOD1Q8N543 542 aa11.67□□□□□ -0.54
BRIX1-205ENST00000515798 FITM2Q8N6M3 262 aa11.67□□□□□ -0.54
BRIX1-205ENST00000515798 USP38Q8NB14 1042 aa11.67□□□□□ -0.54
BRIX1-205ENST00000515798 SNRNP27Q8WVK2 155 aaKnown RBP11.67□□□□□ -0.54
BRIX1-205ENST00000515798 NECTIN2Q92692 538 aa11.67□□□□□ -0.54
BRIX1-205ENST00000515798 EDC3Q96F86 508 aaKnown RBP11.67□□□□□ -0.54
BRIX1-205ENST00000515798 HAUS7Q99871 368 aa11.67□□□□□ -0.54
BRIX1-205ENST00000515798 PRMT1Q99873 361 aaKnown RBP11.67□□□□□ -0.54
BRIX1-205ENST00000515798 SELENOSQ9BQE4 189 aa11.67□□□□□ -0.54
BRIX1-205ENST00000515798 PPP1R12CQ9BZL4 782 aa11.67□□□□□ -0.54
BRIX1-205ENST00000515798 PNMA3Q9UL41 463 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms