RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 DEFB103AP81534 67 aa20■□□□□ 0.79
DDX41-217ENST00000515562 AP3B2Q13367 1082 aa20■□□□□ 0.79
DDX41-217ENST00000515562 LMBR1Q8WVP7 490 aa20■□□□□ 0.79
DDX41-217ENST00000515562 ZBED2Q9BTP6 218 aa20■□□□□ 0.79
DDX41-217ENST00000515562 FAM217BQ9NTX9 383 aaPredicted RBP20■□□□□ 0.79
DDX41-217ENST00000515562 ERAP1Q9NZ08 941 aa20■□□□□ 0.79
DDX41-217ENST00000515562 TELO2Q9Y4R8 837 aa20■□□□□ 0.79
DDX41-217ENST00000515562 SNX14Q9Y5W7 946 aa20■□□□□ 0.79
DDX41-217ENST00000515562 CDC27P30260 824 aa19.99■□□□□ 0.79
DDX41-217ENST00000515562 ADAM17P78536 824 aa19.99■□□□□ 0.79
DDX41-217ENST00000515562 ARHGAP4P98171 946 aa19.99■□□□□ 0.79
DDX41-217ENST00000515562 TAP1Q03518 808 aa19.99■□□□□ 0.79
DDX41-217ENST00000515562 Q6ZUG5 572 aa19.99■□□□□ 0.79
DDX41-217ENST00000515562 FBXL16Q8N461 479 aa19.99■□□□□ 0.79
DDX41-217ENST00000515562 PPM1EQ8WY54 764 aa19.99■□□□□ 0.79
DDX41-217ENST00000515562 BRF1Q92994 677 aa19.99■□□□□ 0.79
DDX41-217ENST00000515562 ANO3Q9BYT9 981 aa19.99■□□□□ 0.79
DDX41-217ENST00000515562 JPH1Q9HDC5 661 aaPredicted RBP19.99■□□□□ 0.79
DDX41-217ENST00000515562 PKD2L1Q9P0L9 805 aa19.99■□□□□ 0.79
DDX41-217ENST00000515562 SMCO2A6NFE2 343 aa19.98■□□□□ 0.79
DDX41-217ENST00000515562 GJB5O95377 273 aa19.98■□□□□ 0.79
DDX41-217ENST00000515562 CPA1P15085 419 aa19.98■□□□□ 0.79
DDX41-217ENST00000515562 PSMA5P28066 241 aa19.98■□□□□ 0.79
DDX41-217ENST00000515562 APOBRQ0VD83 1088 aa19.98■□□□□ 0.79
DDX41-217ENST00000515562 PFKFB3Q16875 520 aaPredicted RBP19.98■□□□□ 0.79
DDX41-217ENST00000515562 TCTN1Q2MV58 587 aa19.98■□□□□ 0.79
DDX41-217ENST00000515562 SYMPKQ92797 1274 aaKnown RBP19.98■□□□□ 0.79
DDX41-217ENST00000515562 GLG1Q92896 1179 aa19.98■□□□□ 0.79
DDX41-217ENST00000515562 MXRA8Q9BRK3 442 aa19.98■□□□□ 0.79
DDX41-217ENST00000515562 SMARCAD1Q9H4L7 1026 aa19.98■□□□□ 0.79
DDX41-217ENST00000515562 KCNH7Q9NS40 1196 aa19.98■□□□□ 0.79
DDX41-217ENST00000515562 MICAL3Q7RTP6 2002 aa19.97■□□□□ 0.79
DDX41-217ENST00000515562 GSTTP1A0A1W2PQM5 241 aa19.97■□□□□ 0.79
DDX41-217ENST00000515562 EPB41L2O43491 1005 aaKnown RBP19.97■□□□□ 0.79
DDX41-217ENST00000515562 GTPBP6O43824 516 aaPredicted RBP19.97■□□□□ 0.79
DDX41-217ENST00000515562 NEFLP07196 543 aa19.97■□□□□ 0.79
DDX41-217ENST00000515562 CTSHP09668 335 aa19.97■□□□□ 0.79
DDX41-217ENST00000515562 SCG2P13521 617 aa19.97■□□□□ 0.79
DDX41-217ENST00000515562 RPS6KB1P23443 525 aa19.97■□□□□ 0.79
DDX41-217ENST00000515562 SREBF1P36956 1147 aa19.97■□□□□ 0.79
DDX41-217ENST00000515562 CLK2P49760 499 aaKnown RBP19.97■□□□□ 0.79
DDX41-217ENST00000515562 PPFIA1Q13136 1202 aa19.97■□□□□ 0.79
DDX41-217ENST00000515562 CEP55Q53EZ4 464 aa19.97■□□□□ 0.79
DDX41-217ENST00000515562 PLEKHG4Q58EX7 1191 aa19.97■□□□□ 0.79
DDX41-217ENST00000515562 TAF2Q6P1X5 1199 aa19.97■□□□□ 0.79
DDX41-217ENST00000515562 DBF4BQ8NFT6 615 aa19.97■□□□□ 0.79
DDX41-217ENST00000515562 CCDC12Q8WUD4 166 aaPredicted RBP19.97■□□□□ 0.79
DDX41-217ENST00000515562 SEPT8Q92599 483 aa19.97■□□□□ 0.79
DDX41-217ENST00000515562 RAD9AQ99638 391 aa19.97■□□□□ 0.79
DDX41-217ENST00000515562 SDF4Q9BRK5 362 aa19.97■□□□□ 0.79
DDX41-217ENST00000515562 THEGQ9P2T0 379 aa19.97■□□□□ 0.79
DDX41-217ENST00000515562 SLC9A2Q9UBY0 812 aa19.97■□□□□ 0.79
DDX41-217ENST00000515562 NFASCO94856 1347 aa19.97■□□□□ 0.79
DDX41-217ENST00000515562 ESYT2A0FGR8 921 aa19.96■□□□□ 0.79
DDX41-217ENST00000515562 AMHP03971 560 aa19.96■□□□□ 0.79
DDX41-217ENST00000515562 ADD1P35611 737 aaKnown RBP19.96■□□□□ 0.79
DDX41-217ENST00000515562 CCDC85BQ15834 202 aaPredicted RBP19.96■□□□□ 0.79
DDX41-217ENST00000515562 TJAP1Q5JTD0 557 aa19.96■□□□□ 0.79
DDX41-217ENST00000515562 TMCO2Q7Z6W1 182 aaPredicted RBP19.96■□□□□ 0.79
DDX41-217ENST00000515562 ARNTL2Q8WYA1 636 aa19.96■□□□□ 0.79
DDX41-217ENST00000515562 PGBD1Q96JS3 809 aa19.96■□□□□ 0.79
DDX41-217ENST00000515562 AGXT2Q9BYV1 514 aa19.96■□□□□ 0.79
DDX41-217ENST00000515562 TSPYL2Q9H2G4 693 aaPredicted RBP19.96■□□□□ 0.79
DDX41-217ENST00000515562 CERS4Q9HA82 394 aa19.96■□□□□ 0.79
DDX41-217ENST00000515562 KAT6AQ92794 2004 aa19.96■□□□□ 0.79
DDX41-217ENST00000515562 COL4A4P53420 1690 aaPredicted RBP19.96■□□□□ 0.79
DDX41-217ENST00000515562 VCANP13611 3396 aa19.96■□□□□ 0.79
DDX41-217ENST00000515562 ARHGEF15O94989 841 aa19.95■□□□□ 0.78
DDX41-217ENST00000515562 POU3F3P20264 500 aaPredicted RBP19.95■□□□□ 0.78
DDX41-217ENST00000515562 MARK3P27448 753 aa19.95■□□□□ 0.78
DDX41-217ENST00000515562 MKRN4PQ13434 485 aaPredicted RBP19.95■□□□□ 0.78
DDX41-217ENST00000515562 GRIK4Q16099 956 aa19.95■□□□□ 0.78
DDX41-217ENST00000515562 MCTP2Q6DN12 878 aa19.95■□□□□ 0.78
DDX41-217ENST00000515562 RPAINQ86UA6 219 aa19.95■□□□□ 0.78
DDX41-217ENST00000515562 RSPH3Q86UC2 560 aa19.95■□□□□ 0.78
DDX41-217ENST00000515562 ATXN2LQ8WWM7 1075 aaKnown RBP19.95■□□□□ 0.78
DDX41-217ENST00000515562 APBB2Q92870 758 aa19.95■□□□□ 0.78
DDX41-217ENST00000515562 TNPO1Q92973 898 aaKnown RBP19.95■□□□□ 0.78
DDX41-217ENST00000515562 AZI2Q9H6S1 392 aa19.95■□□□□ 0.78
DDX41-217ENST00000515562 TUBE1Q9UJT0 475 aa19.95■□□□□ 0.78
DDX41-217ENST00000515562 LCHNA4D1U4 455 aa19.94■□□□□ 0.78
DDX41-217ENST00000515562 RPLP2P05387 115 aaKnown RBP19.94■□□□□ 0.78
DDX41-217ENST00000515562 FAM26DQ5JW98 314 aa19.94■□□□□ 0.78
DDX41-217ENST00000515562 NIPA1Q7RTP0 329 aa19.94■□□□□ 0.78
DDX41-217ENST00000515562 MICALL1Q8N3F8 863 aa19.94■□□□□ 0.78
DDX41-217ENST00000515562 CYP2W1Q8TAV3 490 aa19.94■□□□□ 0.78
DDX41-217ENST00000515562 ZMYND12Q9H0C1 365 aa19.94■□□□□ 0.78
DDX41-217ENST00000515562 AGO4Q9HCK5 861 aaKnown RBP19.94■□□□□ 0.78
DDX41-217ENST00000515562 PRDM6Q9NQX0 595 aa19.94■□□□□ 0.78
DDX41-217ENST00000515562 TMEM260Q9NX78 707 aa19.94■□□□□ 0.78
DDX41-217ENST00000515562 MBLAC1A4D2B0 266 aaPredicted RBP19.93■□□□□ 0.78
DDX41-217ENST00000515562 EPOPA6NHQ4 379 aa19.93■□□□□ 0.78
DDX41-217ENST00000515562 RRN3P2A6NIE6 340 aa19.93■□□□□ 0.78
DDX41-217ENST00000515562 MEIS1O00470 390 aa19.93■□□□□ 0.78
DDX41-217ENST00000515562 PRPF3O43395 683 aaKnown RBP19.93■□□□□ 0.78
DDX41-217ENST00000515562 ZNF76P36508 570 aa19.93■□□□□ 0.78
DDX41-217ENST00000515562 ACTR2P61160 394 aa19.93■□□□□ 0.78
DDX41-217ENST00000515562 AKAP17AQ02040 695 aaKnown RBP19.93■□□□□ 0.78
DDX41-217ENST00000515562 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.93■□□□□ 0.78
DDX41-217ENST00000515562 MYOCDQ8IZQ8 938 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms