RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 CPLX1O14810 134 aa16.91■□□□□ 0.3
HMGCLL1-209ENST00000515546 DEXIO95424 95 aa16.91■□□□□ 0.3
HMGCLL1-209ENST00000515546 SEC24BO95487 1268 aa16.91■□□□□ 0.3
HMGCLL1-209ENST00000515546 FAM86B2P0C5J1 330 aa16.91■□□□□ 0.3
HMGCLL1-209ENST00000515546 ARP10275 920 aa16.91■□□□□ 0.3
HMGCLL1-209ENST00000515546 CKBP12277 381 aa16.91■□□□□ 0.3
HMGCLL1-209ENST00000515546 GPNMBQ14956 572 aa16.91■□□□□ 0.3
HMGCLL1-209ENST00000515546 ZNF697Q5TEC3 545 aa16.91■□□□□ 0.3
HMGCLL1-209ENST00000515546 OTOP2Q7RTS6 562 aa16.91■□□□□ 0.3
HMGCLL1-209ENST00000515546 SEPT1Q8WYJ6 367 aa16.91■□□□□ 0.3
HMGCLL1-209ENST00000515546 GUCD1Q96NT3 240 aa16.91■□□□□ 0.3
HMGCLL1-209ENST00000515546 TTYH1Q9H313 450 aaPredicted RBP16.91■□□□□ 0.3
HMGCLL1-209ENST00000515546 TPCN1Q9ULQ1 816 aa16.91■□□□□ 0.3
HMGCLL1-209ENST00000515546 PFKFB2O60825 505 aa16.9■□□□□ 0.3
HMGCLL1-209ENST00000515546 LGR5O75473 907 aa16.9■□□□□ 0.3
HMGCLL1-209ENST00000515546 PARNO95453 639 aaKnown RBP16.9■□□□□ 0.3
HMGCLL1-209ENST00000515546 CXCL10P02778 98 aa16.9■□□□□ 0.3
HMGCLL1-209ENST00000515546 DNAJB2P25686 324 aa16.9■□□□□ 0.3
HMGCLL1-209ENST00000515546 ADAM17P78536 824 aa16.9■□□□□ 0.3
HMGCLL1-209ENST00000515546 SSRP1Q08945 709 aaKnown RBP16.9■□□□□ 0.3
HMGCLL1-209ENST00000515546 SCRN1Q12765 414 aa16.9■□□□□ 0.3
HMGCLL1-209ENST00000515546 STK3Q13188 491 aa16.9■□□□□ 0.3
HMGCLL1-209ENST00000515546 ANKRD1Q15327 319 aa16.9■□□□□ 0.3
HMGCLL1-209ENST00000515546 UTP14CQ5TAP6 766 aaKnown RBP16.9■□□□□ 0.3
HMGCLL1-209ENST00000515546 CPLX2Q6PUV4 134 aaKnown RBP16.9■□□□□ 0.3
HMGCLL1-209ENST00000515546 DEFB128Q7Z7B8 93 aa16.9■□□□□ 0.3
HMGCLL1-209ENST00000515546 SLC9A2Q9UBY0 812 aa16.9■□□□□ 0.3
HMGCLL1-209ENST00000515546 STK36Q9NRP7 1315 aa16.9■□□□□ 0.3
HMGCLL1-209ENST00000515546 CIITAP33076 1130 aa16.89■□□□□ 0.29
HMGCLL1-209ENST00000515546 AK2P54819 239 aa16.89■□□□□ 0.29
HMGCLL1-209ENST00000515546 NPY5RQ15761 445 aa16.89■□□□□ 0.29
HMGCLL1-209ENST00000515546 DAGLBQ8NCG7 672 aa16.89■□□□□ 0.29
HMGCLL1-209ENST00000515546 RASGRP4Q8TDF6 673 aa16.89■□□□□ 0.29
HMGCLL1-209ENST00000515546 LMBR1Q8WVP7 490 aa16.89■□□□□ 0.29
HMGCLL1-209ENST00000515546 ATP6V0A1Q93050 837 aa16.89■□□□□ 0.29
HMGCLL1-209ENST00000515546 PCYT2Q99447 389 aa16.89■□□□□ 0.29
HMGCLL1-209ENST00000515546 SDF4Q9BRK5 362 aa16.89■□□□□ 0.29
HMGCLL1-209ENST00000515546 RNPEPQ9H4A4 650 aa16.89■□□□□ 0.29
HMGCLL1-209ENST00000515546 ERAP1Q9NZ08 941 aa16.89■□□□□ 0.29
HMGCLL1-209ENST00000515546 STXBP5LQ9Y2K9 1186 aa16.89■□□□□ 0.29
HMGCLL1-209ENST00000515546 GRXCR1A8MXD5 290 aa16.88■□□□□ 0.29
HMGCLL1-209ENST00000515546 TREHO43280 583 aa16.88■□□□□ 0.29
HMGCLL1-209ENST00000515546 NBNO60934 754 aa16.88■□□□□ 0.29
HMGCLL1-209ENST00000515546 CAND2O75155 1236 aa16.88■□□□□ 0.29
HMGCLL1-209ENST00000515546 CDKL5O76039 1030 aa16.88■□□□□ 0.29
HMGCLL1-209ENST00000515546 GNAT1P11488 350 aa16.88■□□□□ 0.29
HMGCLL1-209ENST00000515546 ACTR2P61160 394 aa16.88■□□□□ 0.29
HMGCLL1-209ENST00000515546 SETQ01105 290 aaPredicted RBP16.88■□□□□ 0.29
HMGCLL1-209ENST00000515546 MBTPS1Q14703 1052 aa16.88■□□□□ 0.29
HMGCLL1-209ENST00000515546 PLA2G4DQ86XP0 818 aa16.88■□□□□ 0.29
HMGCLL1-209ENST00000515546 LENG9Q96B70 501 aa16.88■□□□□ 0.29
HMGCLL1-209ENST00000515546 PBX4Q9BYU1 374 aa16.88■□□□□ 0.29
HMGCLL1-209ENST00000515546 SEMA6BQ9H3T3 888 aa16.88■□□□□ 0.29
HMGCLL1-209ENST00000515546 SETD4Q9NVD3 440 aa16.88■□□□□ 0.29
HMGCLL1-209ENST00000515546 SLC4A7Q9Y6M7 1214 aa16.88■□□□□ 0.29
HMGCLL1-209ENST00000515546 NRCAMQ92823 1304 aa16.88■□□□□ 0.29
HMGCLL1-209ENST00000515546 CHD7Q9P2D1 2997 aa16.88■□□□□ 0.29
HMGCLL1-209ENST00000515546 M0R2N6 131 aa16.87■□□□□ 0.29
HMGCLL1-209ENST00000515546 DHX15O43143 795 aaKnown RBP16.87■□□□□ 0.29
HMGCLL1-209ENST00000515546 EDIL3O43854 480 aa16.87■□□□□ 0.29
HMGCLL1-209ENST00000515546 BAIAP3O94812 1187 aa16.87■□□□□ 0.29
HMGCLL1-209ENST00000515546 ATG7O95352 703 aa16.87■□□□□ 0.29
HMGCLL1-209ENST00000515546 CCNE2O96020 404 aa16.87■□□□□ 0.29
HMGCLL1-209ENST00000515546 ACTN1P12814 892 aa16.87■□□□□ 0.29
HMGCLL1-209ENST00000515546 ZNF76P36508 570 aa16.87■□□□□ 0.29
HMGCLL1-209ENST00000515546 PBX2P40425 430 aa16.87■□□□□ 0.29
HMGCLL1-209ENST00000515546 NLRP5P59047 1200 aa16.87■□□□□ 0.29
HMGCLL1-209ENST00000515546 RAB30Q15771 203 aa16.87■□□□□ 0.29
HMGCLL1-209ENST00000515546 C8orf34Q49A92 452 aa16.87■□□□□ 0.29
HMGCLL1-209ENST00000515546 ZNF618Q5T7W0 954 aa16.87■□□□□ 0.29
HMGCLL1-209ENST00000515546 TIFAQ96CG3 184 aa16.87■□□□□ 0.29
HMGCLL1-209ENST00000515546 AIFM3Q96NN9 605 aa16.87■□□□□ 0.29
HMGCLL1-209ENST00000515546 SLKQ9H2G2 1235 aaPredicted RBP16.87■□□□□ 0.29
HMGCLL1-209ENST00000515546 SMARCAD1Q9H4L7 1026 aa16.87■□□□□ 0.29
HMGCLL1-209ENST00000515546 PCDHA4Q9UN74 947 aa16.87■□□□□ 0.29
HMGCLL1-209ENST00000515546 IGKV6D-21A0A0A0MT36 114 aa16.86■□□□□ 0.29
HMGCLL1-209ENST00000515546 IPO5O00410 1097 aaKnown RBP16.86■□□□□ 0.29
HMGCLL1-209ENST00000515546 CTDNEP1O95476 244 aa16.86■□□□□ 0.29
HMGCLL1-209ENST00000515546 PPFIA1Q13136 1202 aa16.86■□□□□ 0.29
HMGCLL1-209ENST00000515546 GALNT17Q6IS24 598 aa16.86■□□□□ 0.29
HMGCLL1-209ENST00000515546 TET1Q8NFU7 2136 aa16.86■□□□□ 0.29
HMGCLL1-209ENST00000515546 GLG1Q92896 1179 aa16.86■□□□□ 0.29
HMGCLL1-209ENST00000515546 FAM161BQ96MY7 647 aa16.86■□□□□ 0.29
HMGCLL1-209ENST00000515546 FTOQ9C0B1 505 aaKnown RBP eCLIP16.86■□□□□ 0.29
HMGCLL1-209ENST00000515546 TRIP12Q14669 1992 aaPredicted RBP16.86■□□□□ 0.29
HMGCLL1-209ENST00000515546 MBLAC1A4D2B0 266 aaPredicted RBP16.85■□□□□ 0.29
HMGCLL1-209ENST00000515546 ZBBXA8MT70 800 aa16.85■□□□□ 0.29
HMGCLL1-209ENST00000515546 LARGE1O95461 756 aa16.85■□□□□ 0.29
HMGCLL1-209ENST00000515546 ATP2A2P16615 1042 aaKnown RBP16.85■□□□□ 0.29
HMGCLL1-209ENST00000515546 MARK3P27448 753 aa16.85■□□□□ 0.29
HMGCLL1-209ENST00000515546 THPOP40225 353 aa16.85■□□□□ 0.29
HMGCLL1-209ENST00000515546 TCTN1Q2MV58 587 aa16.85■□□□□ 0.29
HMGCLL1-209ENST00000515546 CNKSR3Q6P9H4 555 aa16.85■□□□□ 0.29
HMGCLL1-209ENST00000515546 PLPPR4Q7Z2D5 763 aa16.85■□□□□ 0.29
HMGCLL1-209ENST00000515546 RPAINQ86UA6 219 aa16.85■□□□□ 0.29
HMGCLL1-209ENST00000515546 BLIDQ8IZY5 108 aa16.85■□□□□ 0.29
HMGCLL1-209ENST00000515546 PIAS4Q8N2W9 510 aaPredicted RBP16.85■□□□□ 0.29
HMGCLL1-209ENST00000515546 GTF3C6Q969F1 213 aa16.85■□□□□ 0.29
HMGCLL1-209ENST00000515546 SLC9A7Q96T83 725 aa16.85■□□□□ 0.29
HMGCLL1-209ENST00000515546 CDX2Q99626 313 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms