RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 HGSNATQ68CP4 663 aa13.99□□□□□ -0.17
SMAD1-215ENST00000515385 PI16Q6UXB8 463 aa13.99□□□□□ -0.17
SMAD1-215ENST00000515385 TSHZ1Q6ZSZ6 1077 aa13.99□□□□□ -0.17
SMAD1-215ENST00000515385 BICD1Q96G01 975 aa13.99□□□□□ -0.17
SMAD1-215ENST00000515385 PIH1D3Q9NQM4 214 aaKnown RBP13.99□□□□□ -0.17
SMAD1-215ENST00000515385 INTS9Q9NV88 658 aaKnown RBP13.99□□□□□ -0.17
SMAD1-215ENST00000515385 DCDC2CA8MYV0 355 aa13.99□□□□□ -0.17
SMAD1-215ENST00000515385 SUN1O94901 812 aa13.99□□□□□ -0.17
SMAD1-215ENST00000515385 UBOX5O94941 541 aa13.99□□□□□ -0.17
SMAD1-215ENST00000515385 AGTP01019 485 aa13.99□□□□□ -0.17
SMAD1-215ENST00000515385 FAM163BP0C2L3 166 aa13.99□□□□□ -0.17
SMAD1-215ENST00000515385 ABCD1P33897 745 aa13.99□□□□□ -0.17
SMAD1-215ENST00000515385 MCM7P33993 719 aa13.99□□□□□ -0.17
SMAD1-215ENST00000515385 USP11P51784 963 aa13.99□□□□□ -0.17
SMAD1-215ENST00000515385 MXRA7P84157 204 aa13.99□□□□□ -0.17
SMAD1-215ENST00000515385 MAP3K12Q12852 859 aa13.99□□□□□ -0.17
SMAD1-215ENST00000515385 TDRD12Q587J7 1177 aaKnown RBP13.99□□□□□ -0.17
SMAD1-215ENST00000515385 CCDC178Q5BJE1 867 aa13.99□□□□□ -0.17
SMAD1-215ENST00000515385 RRP12Q5JTH9 1297 aaKnown RBP13.99□□□□□ -0.17
SMAD1-215ENST00000515385 CNNM4Q6P4Q7 775 aa13.99□□□□□ -0.17
SMAD1-215ENST00000515385 DTHD1Q6ZMT9 781 aa13.99□□□□□ -0.17
SMAD1-215ENST00000515385 ERICH1Q86X53 443 aa13.99□□□□□ -0.17
SMAD1-215ENST00000515385 COL23A1Q86Y22 540 aaPredicted RBP13.99□□□□□ -0.17
SMAD1-215ENST00000515385 RBM12BQ8IXT5 1001 aaKnown RBP13.99□□□□□ -0.17
SMAD1-215ENST00000515385 C4orf32Q8N8J7 132 aa13.99□□□□□ -0.17
SMAD1-215ENST00000515385 MDM1Q8TC05 714 aa13.99□□□□□ -0.17
SMAD1-215ENST00000515385 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.99□□□□□ -0.17
SMAD1-215ENST00000515385 MMTAG2Q9BU76 263 aaKnown RBP13.99□□□□□ -0.17
SMAD1-215ENST00000515385 TRIM7Q9C029 511 aa13.99□□□□□ -0.17
SMAD1-215ENST00000515385 PNMA2Q9UL42 364 aa13.99□□□□□ -0.17
SMAD1-215ENST00000515385 UTP11Q9Y3A2 253 aaKnown RBP13.99□□□□□ -0.17
SMAD1-215ENST00000515385 USP15Q9Y4E8 981 aaPredicted RBP13.99□□□□□ -0.17
SMAD1-215ENST00000515385 V9GY48 417 aaPredicted RBP13.99□□□□□ -0.17
SMAD1-215ENST00000515385 KIF1AQ12756 1690 aa13.98□□□□□ -0.17
SMAD1-215ENST00000515385 GPR75-ASB3A0A0A6YYF3 556 aa13.98□□□□□ -0.17
SMAD1-215ENST00000515385 SNX3O60493 162 aa13.98□□□□□ -0.17
SMAD1-215ENST00000515385 KIF4AO95239 1232 aa13.98□□□□□ -0.17
SMAD1-215ENST00000515385 OAS1P00973 400 aaKnown RBP13.98□□□□□ -0.17
SMAD1-215ENST00000515385 ALDH3A1P30838 453 aa13.98□□□□□ -0.17
SMAD1-215ENST00000515385 UBA7P41226 1012 aa13.98□□□□□ -0.17
SMAD1-215ENST00000515385 PDE4DQ08499 809 aa13.98□□□□□ -0.17
SMAD1-215ENST00000515385 LAMB3Q13751 1172 aa13.98□□□□□ -0.17
SMAD1-215ENST00000515385 SEC23AQ15436 765 aa13.98□□□□□ -0.17
SMAD1-215ENST00000515385 PPP2R5EQ16537 467 aa13.98□□□□□ -0.17
SMAD1-215ENST00000515385 SFMBT2Q5VUG0 894 aa13.98□□□□□ -0.17
SMAD1-215ENST00000515385 CATIPQ7Z7H3 387 aa13.98□□□□□ -0.17
SMAD1-215ENST00000515385 CFAP61Q8NHU2 1237 aa13.98□□□□□ -0.17
SMAD1-215ENST00000515385 FBF1Q8TES7 1133 aa13.98□□□□□ -0.17
SMAD1-215ENST00000515385 ANKS1AQ92625 1134 aa13.98□□□□□ -0.17
SMAD1-215ENST00000515385 C7orf25Q9BPX7 421 aa13.98□□□□□ -0.17
SMAD1-215ENST00000515385 ZKSCAN3Q9BRR0 538 aa13.98□□□□□ -0.17
SMAD1-215ENST00000515385 TXLNGYQ9BZA5 131 aa13.98□□□□□ -0.17
SMAD1-215ENST00000515385 NEUROG2Q9H2A3 272 aa13.98□□□□□ -0.17
SMAD1-215ENST00000515385 ADAM22Q9P0K1 906 aa13.98□□□□□ -0.17
SMAD1-215ENST00000515385 CEP72Q9P209 647 aa13.98□□□□□ -0.17
SMAD1-215ENST00000515385 ASB3Q9Y575 518 aa13.98□□□□□ -0.17
SMAD1-215ENST00000515385 TACC3Q9Y6A5 838 aa13.98□□□□□ -0.17
SMAD1-215ENST00000515385 PDLIM1O00151 329 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 KCNK3O14649 394 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 EPHB6O15197 1021 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 LTKP29376 864 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 AMPD3Q01432 767 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 DYNC1I2Q13409 638 aaKnown RBP13.97□□□□□ -0.17
SMAD1-215ENST00000515385 SNX1Q13596 522 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 SLC18A3Q16572 532 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 C6orf118Q5T5N4 469 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 CENPPQ6IPU0 288 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 FOXR2Q6PJQ5 311 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 ASRGL1Q7L266 308 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 TEKT4Q8WW24 435 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 SELENOSQ9BQE4 189 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 ABCF3Q9NUQ8 709 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 PNPLA7Q6ZV29 1317 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 TJP1Q07157 1748 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 MYH10P35580 1976 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 DPPA5A6NC42 116 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 GSG1L2A8MUP6 293 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 LAD1O00515 517 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 PCCAP05165 728 aaPredicted RBP13.97□□□□□ -0.17
SMAD1-215ENST00000515385 KLRC1P26715 233 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 CALML3P27482 149 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 FAM69CQ0P6D2 419 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 PIK3AP1Q6ZUJ8 805 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 NCAPG2Q86XI2 1143 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 DDX42Q86XP3 938 aaKnown RBP eCLIP13.97□□□□□ -0.17
SMAD1-215ENST00000515385 ESR2Q92731 530 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 TMEM109Q9BVC6 243 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 PCDHGA4Q9Y5G9 962 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 SCN11AQ9UI33 1791 aa13.97□□□□□ -0.17
SMAD1-215ENST00000515385 DAPK3O43293 454 aa13.96□□□□□ -0.17
SMAD1-215ENST00000515385 CEP104O60308 925 aa13.96□□□□□ -0.17
SMAD1-215ENST00000515385 PRDM1O75626 825 aa13.96□□□□□ -0.17
SMAD1-215ENST00000515385 ATP6V1C1P21283 382 aa13.96□□□□□ -0.17
SMAD1-215ENST00000515385 NLRP5P59047 1200 aa13.96□□□□□ -0.17
SMAD1-215ENST00000515385 GNPTABQ3T906 1256 aa13.96□□□□□ -0.17
SMAD1-215ENST00000515385 CCDC152Q4G0S7 254 aa13.96□□□□□ -0.17
SMAD1-215ENST00000515385 BTNL9Q6UXG8 535 aa13.96□□□□□ -0.17
SMAD1-215ENST00000515385 SPICE1Q8N0Z3 855 aa13.96□□□□□ -0.17
SMAD1-215ENST00000515385 RASGEF1CQ8N431 466 aa13.96□□□□□ -0.17
SMAD1-215ENST00000515385 EZH1Q92800 747 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms