RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 TUT1Q9H6E5 874 aaKnown RBP13.09□□□□□ -0.31
SUB1-213ENST00000515355 ZNF215Q9UL58 517 aaPredicted RBP13.09□□□□□ -0.31
SUB1-213ENST00000515355 UMODL1Q5DID0 1318 aa13.09□□□□□ -0.31
SUB1-213ENST00000515355 KIAA1217Q5T5P2 1943 aa13.08□□□□□ -0.32
SUB1-213ENST00000515355 IPO5O00410 1097 aaKnown RBP13.08□□□□□ -0.32
SUB1-213ENST00000515355 MARCH6O60337 910 aa13.08□□□□□ -0.32
SUB1-213ENST00000515355 F2P00734 622 aa13.08□□□□□ -0.32
SUB1-213ENST00000515355 ZNF200P98182 395 aaPredicted RBP13.08□□□□□ -0.32
SUB1-213ENST00000515355 FPGSQ05932 587 aa13.08□□□□□ -0.32
SUB1-213ENST00000515355 NR5A1Q13285 461 aa13.08□□□□□ -0.32
SUB1-213ENST00000515355 ITGB3BPQ13352 177 aaPredicted RBP13.08□□□□□ -0.32
SUB1-213ENST00000515355 LETM2Q2VYF4 491 aa13.08□□□□□ -0.32
SUB1-213ENST00000515355 GDF6Q6KF10 455 aaPredicted RBP13.08□□□□□ -0.32
SUB1-213ENST00000515355 C16orf70Q9BSU1 422 aa13.08□□□□□ -0.32
SUB1-213ENST00000515355 AZI2Q9H6S1 392 aa13.08□□□□□ -0.32
SUB1-213ENST00000515355 TBX21Q9UL17 535 aa13.08□□□□□ -0.32
SUB1-213ENST00000515355 SAMM50Q9Y512 469 aa13.08□□□□□ -0.32
SUB1-213ENST00000515355 GSTTP1A0A1W2PQM5 241 aa13.07□□□□□ -0.32
SUB1-213ENST00000515355 BACH1O14867 736 aa13.07□□□□□ -0.32
SUB1-213ENST00000515355 CHMP2AO43633 222 aa13.07□□□□□ -0.32
SUB1-213ENST00000515355 CD2BP2O95400 341 aaKnown RBP13.07□□□□□ -0.32
SUB1-213ENST00000515355 SMIM10L2AP0DMW4 78 aa13.07□□□□□ -0.32
SUB1-213ENST00000515355 SMIM10L2BP0DMW5 78 aa13.07□□□□□ -0.32
SUB1-213ENST00000515355 ACRP10323 421 aa13.07□□□□□ -0.32
SUB1-213ENST00000515355 ATP2B1P20020 1258 aa13.07□□□□□ -0.32
SUB1-213ENST00000515355 USP11P51784 963 aa13.07□□□□□ -0.32
SUB1-213ENST00000515355 ACTR2P61160 394 aa13.07□□□□□ -0.32
SUB1-213ENST00000515355 SETQ01105 290 aaPredicted RBP13.07□□□□□ -0.32
SUB1-213ENST00000515355 PTPN11Q06124 597 aaPredicted RBP13.07□□□□□ -0.32
SUB1-213ENST00000515355 GNL2Q13823 731 aaKnown RBP13.07□□□□□ -0.32
SUB1-213ENST00000515355 SAFBQ15424 915 aaKnown RBP eCLIP13.07□□□□□ -0.32
SUB1-213ENST00000515355 NPY5RQ15761 445 aa13.07□□□□□ -0.32
SUB1-213ENST00000515355 KRT40Q6A162 431 aa13.07□□□□□ -0.32
SUB1-213ENST00000515355 NIPA1Q7RTP0 329 aa13.07□□□□□ -0.32
SUB1-213ENST00000515355 TMEM199Q8N511 208 aa13.07□□□□□ -0.32
SUB1-213ENST00000515355 RETREG2Q8NC44 543 aa13.07□□□□□ -0.32
SUB1-213ENST00000515355 DAGLBQ8NCG7 672 aa13.07□□□□□ -0.32
SUB1-213ENST00000515355 GJA10Q969M2 543 aa13.07□□□□□ -0.32
SUB1-213ENST00000515355 SCLYQ96I15 445 aa13.07□□□□□ -0.32
SUB1-213ENST00000515355 C8orf76Q96K31 380 aa13.07□□□□□ -0.32
SUB1-213ENST00000515355 GTF2IRD1Q9UHL9 959 aa13.07□□□□□ -0.32
SUB1-213ENST00000515355 MYH7BA7E2Y1 1941 aa13.06□□□□□ -0.32
SUB1-213ENST00000515355 IGLV3-22A0A075B6J6 115 aa13.06□□□□□ -0.32
SUB1-213ENST00000515355 C17orf102A2RUQ5 167 aa13.06□□□□□ -0.32
SUB1-213ENST00000515355 BTBD18B2RXH4 712 aa13.06□□□□□ -0.32
SUB1-213ENST00000515355 CCNT1O60563 726 aaKnown RBP13.06□□□□□ -0.32
SUB1-213ENST00000515355 TDP2O95551 362 aa13.06□□□□□ -0.32
SUB1-213ENST00000515355 CSF2RAP15509 400 aa13.06□□□□□ -0.32
SUB1-213ENST00000515355 IGBP1P78318 339 aa13.06□□□□□ -0.32
SUB1-213ENST00000515355 HMGN5P82970 282 aaKnown RBP13.06□□□□□ -0.32
SUB1-213ENST00000515355 MFSD5Q6N075 450 aa13.06□□□□□ -0.32
SUB1-213ENST00000515355 DEFB128Q7Z7B8 93 aa13.06□□□□□ -0.32
SUB1-213ENST00000515355 CKAP2LQ8IYA6 745 aa13.06□□□□□ -0.32
SUB1-213ENST00000515355 DIS3L2Q8IYB7 885 aaKnown RBP13.06□□□□□ -0.32
SUB1-213ENST00000515355 TDHQ8IZJ6 230 aa13.06□□□□□ -0.32
SUB1-213ENST00000515355 CRYGNQ8WXF5 182 aa13.06□□□□□ -0.32
SUB1-213ENST00000515355 ATP6V0A1Q93050 837 aa13.06□□□□□ -0.32
SUB1-213ENST00000515355 TMX3Q96JJ7 454 aa13.06□□□□□ -0.32
SUB1-213ENST00000515355 LLPHQ9BRT6 129 aaKnown RBP13.06□□□□□ -0.32
SUB1-213ENST00000515355 NOC4LQ9BVI4 516 aaKnown RBP13.06□□□□□ -0.32
SUB1-213ENST00000515355 RNPEPQ9H4A4 650 aa13.06□□□□□ -0.32
SUB1-213ENST00000515355 SETD4Q9NVD3 440 aa13.06□□□□□ -0.32
SUB1-213ENST00000515355 FAM205CA6NFA0 338 aa13.05□□□□□ -0.32
SUB1-213ENST00000515355 M0R2N6 131 aa13.05□□□□□ -0.32
SUB1-213ENST00000515355 HAS3O00219 553 aa13.05□□□□□ -0.32
SUB1-213ENST00000515355 MSH4O15457 936 aa13.05□□□□□ -0.32
SUB1-213ENST00000515355 GAS7O60861 476 aa13.05□□□□□ -0.32
SUB1-213ENST00000515355 HOXD8P13378 290 aaPredicted RBP13.05□□□□□ -0.32
SUB1-213ENST00000515355 CIITAP33076 1130 aa13.05□□□□□ -0.32
SUB1-213ENST00000515355 BMP8BP34820 402 aa13.05□□□□□ -0.32
SUB1-213ENST00000515355 EPHB4P54760 987 aa13.05□□□□□ -0.32
SUB1-213ENST00000515355 BFSP2Q13515 415 aa13.05□□□□□ -0.32
SUB1-213ENST00000515355 SHHQ15465 462 aa13.05□□□□□ -0.32
SUB1-213ENST00000515355 C9orf50Q5SZB4 431 aa13.05□□□□□ -0.32
SUB1-213ENST00000515355 NEK8Q86SG6 692 aa13.05□□□□□ -0.32
SUB1-213ENST00000515355 FAM177A1Q8N128 213 aaPredicted RBP13.05□□□□□ -0.32
SUB1-213ENST00000515355 SMARCAD1Q9H4L7 1026 aa13.05□□□□□ -0.32
SUB1-213ENST00000515355 TBC1D22BQ9NU19 505 aa13.05□□□□□ -0.32
SUB1-213ENST00000515355 ERAP1Q9NZ08 941 aa13.05□□□□□ -0.32
SUB1-213ENST00000515355 DDX25Q9UHL0 483 aaKnown RBP13.05□□□□□ -0.32
SUB1-213ENST00000515355 TRPC6Q9Y210 931 aa13.05□□□□□ -0.32
SUB1-213ENST00000515355 NFASCO94856 1347 aa13.05□□□□□ -0.32
SUB1-213ENST00000515355 EDIL3O43854 480 aa13.04□□□□□ -0.32
SUB1-213ENST00000515355 CCNE2O96020 404 aa13.04□□□□□ -0.32
SUB1-213ENST00000515355 MMP1P03956 469 aa13.04□□□□□ -0.32
SUB1-213ENST00000515355 GNAT1P11488 350 aa13.04□□□□□ -0.32
SUB1-213ENST00000515355 CD44P16070 742 aaKnown RBP13.04□□□□□ -0.32
SUB1-213ENST00000515355 THPOP40225 353 aa13.04□□□□□ -0.32
SUB1-213ENST00000515355 MCM2P49736 904 aa13.04□□□□□ -0.32
SUB1-213ENST00000515355 STAT5BP51692 787 aa13.04□□□□□ -0.32
SUB1-213ENST00000515355 PPFIA1Q13136 1202 aa13.04□□□□□ -0.32
SUB1-213ENST00000515355 PPIGQ13427 754 aaKnown RBP eCLIP13.04□□□□□ -0.32
SUB1-213ENST00000515355 HIC1Q14526 733 aa13.04□□□□□ -0.32
SUB1-213ENST00000515355 EARS2Q5JPH6 523 aaKnown RBP13.04□□□□□ -0.32
SUB1-213ENST00000515355 LRCH2Q5VUJ6 765 aa13.04□□□□□ -0.32
SUB1-213ENST00000515355 SWSAP1Q6NVH7 229 aa13.04□□□□□ -0.32
SUB1-213ENST00000515355 MIS18BP1Q6P0N0 1132 aa13.04□□□□□ -0.32
SUB1-213ENST00000515355 SESTD1Q86VW0 696 aa13.04□□□□□ -0.32
SUB1-213ENST00000515355 CCDC155Q8N6L0 562 aa13.04□□□□□ -0.32
SUB1-213ENST00000515355 RNPC3Q96LT9 517 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms